RNA–Protein interactions for RNA: ENST00000354473.4

VPS72-201, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 3

Gene VPS72, Length 1,347 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-201ENST00000354473 A8MWP6 167 aa14.27□□□□□ -0.12
VPS72-201ENST00000354473 F8W735 103 aaPredicted RBP14.27□□□□□ -0.12
VPS72-201ENST00000354473 I3L2K1 104 aa14.27□□□□□ -0.12
VPS72-201ENST00000354473 MT-CO2P00403 227 aa14.27□□□□□ -0.12
VPS72-201ENST00000354473 FOLR2P14207 255 aa14.27□□□□□ -0.12
VPS72-201ENST00000354473 VAMP1P23763 118 aa14.27□□□□□ -0.12
VPS72-201ENST00000354473 CCR6P51684 374 aa14.27□□□□□ -0.12
VPS72-201ENST00000354473 SPCS3P61009 180 aa14.27□□□□□ -0.12
VPS72-201ENST00000354473 RBMS2Q15434 407 aaKnown RBP14.27□□□□□ -0.12
VPS72-201ENST00000354473 TMEM128Q5BJH2 165 aa14.27□□□□□ -0.12
VPS72-201ENST00000354473 SPSB3Q6PJ21 355 aa14.27□□□□□ -0.12
VPS72-201ENST00000354473 UNQ9165/PRO28630Q6UXU0 137 aa14.27□□□□□ -0.12
VPS72-201ENST00000354473 LGI3Q8N145 548 aa14.27□□□□□ -0.12
VPS72-201ENST00000354473 DYNLRB2Q8TF09 96 aa14.27□□□□□ -0.12
VPS72-201ENST00000354473 CACNG8Q8WXS5 425 aa14.27□□□□□ -0.12
VPS72-201ENST00000354473 PINX1Q96BK5 328 aaKnown RBP14.27□□□□□ -0.12
VPS72-201ENST00000354473 SMAD5-AS1Q9Y6J3 95 aa14.27□□□□□ -0.12
VPS72-201ENST00000354473 A0A0B4J2A0 478 aa14.26□□□□□ -0.13
VPS72-201ENST00000354473 TMEM213A2RRL7 107 aa14.26□□□□□ -0.13
VPS72-201ENST00000354473 NAP1L6A6NFF2 107 aa14.26□□□□□ -0.13
VPS72-201ENST00000354473 IGHV3-48P01763 117 aa14.26□□□□□ -0.13
VPS72-201ENST00000354473 SULT1A3P0DMM9 295 aa14.26□□□□□ -0.13
VPS72-201ENST00000354473 SULT1A4P0DMN0 295 aa14.26□□□□□ -0.13
VPS72-201ENST00000354473 IL7P13232 177 aa14.26□□□□□ -0.13
VPS72-201ENST00000354473 LYZL2Q7Z4W2 148 aa14.26□□□□□ -0.13
VPS72-201ENST00000354473 CENPSQ8N2Z9 138 aa14.26□□□□□ -0.13
VPS72-201ENST00000354473 OR52E5Q8NH55 327 aa14.26□□□□□ -0.13
VPS72-201ENST00000354473 CHRDL1Q9BU40 450 aa14.26□□□□□ -0.13
VPS72-201ENST00000354473 SHPKQ9UHJ6 478 aa14.26□□□□□ -0.13
VPS72-201ENST00000354473 IZUMO1RA6ND01 250 aa14.25□□□□□ -0.13
VPS72-201ENST00000354473 NXPH3O95157 252 aa14.25□□□□□ -0.13
VPS72-201ENST00000354473 RNASE2P10153 161 aaKnown RBP14.25□□□□□ -0.13
VPS72-201ENST00000354473 MFAP4P55083 255 aa14.25□□□□□ -0.13
VPS72-201ENST00000354473 CD300EQ496F6 205 aaPredicted RBP14.25□□□□□ -0.13
VPS72-201ENST00000354473 NMSQ5H8A3 153 aa14.25□□□□□ -0.13
VPS72-201ENST00000354473 OR2K2Q8NGT1 345 aa14.25□□□□□ -0.13
VPS72-201ENST00000354473 ZNF436Q9C0F3 470 aaPredicted RBP14.25□□□□□ -0.13
VPS72-201ENST00000354473 PALMDQ9NP74 551 aa14.25□□□□□ -0.13
VPS72-201ENST00000354473 CBLN1P23435 193 aa14.24□□□□□ -0.13
VPS72-201ENST00000354473 ADMP35318 185 aa14.24□□□□□ -0.13
VPS72-201ENST00000354473 SUB1P53999 127 aaKnown RBP eCLIP14.24□□□□□ -0.13
VPS72-201ENST00000354473 PPP1R1AQ13522 171 aa14.24□□□□□ -0.13
VPS72-201ENST00000354473 TM4SF20Q53R12 229 aa14.24□□□□□ -0.13
VPS72-201ENST00000354473 HEYLQ9NQ87 328 aaPredicted RBP14.24□□□□□ -0.13
VPS72-201ENST00000354473 GAR1Q9NY12 217 aaKnown RBP14.24□□□□□ -0.13
VPS72-201ENST00000354473 PIGBOS1A0A0B4J2F0 54 aa14.23□□□□□ -0.13
VPS72-201ENST00000354473 CENPXA8MT69 81 aa14.23□□□□□ -0.13
VPS72-201ENST00000354473 CEBPZOSA8MTT3 80 aa14.23□□□□□ -0.13
VPS72-201ENST00000354473 NDUFB6O95139 128 aa14.23□□□□□ -0.13
VPS72-201ENST00000354473 CTSGP08311 255 aa14.23□□□□□ -0.13
VPS72-201ENST00000354473 SMCO1Q147U7 214 aa14.23□□□□□ -0.13
VPS72-201ENST00000354473 DEFB114Q30KQ6 69 aa14.23□□□□□ -0.13
VPS72-201ENST00000354473 CNPY1Q3B7I2 92 aa14.23□□□□□ -0.13
VPS72-201ENST00000354473 ANKRD55Q3KP44 614 aa14.23□□□□□ -0.13
VPS72-201ENST00000354473 TMEM190Q8WZ59 177 aa14.23□□□□□ -0.13
VPS72-201ENST00000354473 TXN2Q99757 166 aa14.23□□□□□ -0.13
VPS72-201ENST00000354473 TECRQ9NZ01 308 aaKnown RBP14.23□□□□□ -0.13
VPS72-201ENST00000354473 CACFD1Q9UGQ2 172 aa14.23□□□□□ -0.13
VPS72-201ENST00000354473 UFC1Q9Y3C8 167 aa14.23□□□□□ -0.13
VPS72-201ENST00000354473 SELENOKQ9Y6D0 94 aa14.23□□□□□ -0.13
VPS72-201ENST00000354473 A6NHS1 94 aa14.22□□□□□ -0.13
VPS72-201ENST00000354473 CORTO00230 105 aa14.22□□□□□ -0.13
VPS72-201ENST00000354473 NDUFA4O00483 81 aa14.22□□□□□ -0.13
VPS72-201ENST00000354473 NUPL2O15504 423 aaKnown RBP14.22□□□□□ -0.13
VPS72-201ENST00000354473 SFT2D2O95562 160 aa14.22□□□□□ -0.13
VPS72-201ENST00000354473 FCGR2BP31994 310 aaPredicted RBP14.22□□□□□ -0.13
VPS72-201ENST00000354473 BTCP35070 178 aa14.22□□□□□ -0.13
VPS72-201ENST00000354473 BSXQ3C1V8 233 aa14.22□□□□□ -0.13
VPS72-201ENST00000354473 PVRIGQ6DKI7 326 aa14.22□□□□□ -0.13
VPS72-201ENST00000354473 UXS1Q8NBZ7 420 aa14.22□□□□□ -0.13
VPS72-201ENST00000354473 C7orf50Q9BRJ6 194 aaKnown RBP14.22□□□□□ -0.13
VPS72-201ENST00000354473 IGHV3OR16-8A0A075B7F1 116 aa14.21□□□□□ -0.13
VPS72-201ENST00000354473 DUXBA0A1W2PPF3 345 aa14.21□□□□□ -0.13
VPS72-201ENST00000354473 GNG7O60262 68 aa14.21□□□□□ -0.13
VPS72-201ENST00000354473 HTR2BP41595 481 aa14.21□□□□□ -0.13
VPS72-201ENST00000354473 ELLP55199 621 aaPredicted RBP14.21□□□□□ -0.13
VPS72-201ENST00000354473 RELQ04864 619 aaPredicted RBP14.21□□□□□ -0.13
VPS72-201ENST00000354473 TNFRSF9Q07011 255 aa14.21□□□□□ -0.13
VPS72-201ENST00000354473 C11orf87Q6NUJ2 197 aa14.21□□□□□ -0.13
VPS72-201ENST00000354473 GTSCR1Q86UQ5 136 aa14.21□□□□□ -0.13
VPS72-201ENST00000354473 Q8N1Y9 231 aa14.21□□□□□ -0.13
VPS72-201ENST00000354473 C20orf24Q9BUV8 137 aa14.21□□□□□ -0.13
VPS72-201ENST00000354473 DAZ1Q9NQZ3 744 aaKnown RBP14.21□□□□□ -0.13
VPS72-201ENST00000354473 MLXQ9UH92 298 aa14.21□□□□□ -0.13
VPS72-201ENST00000354473 FLVCR2Q9UPI3 526 aa14.21□□□□□ -0.13
VPS72-201ENST00000354473 A0A1B0GU03 582 aa14.2□□□□□ -0.14
VPS72-201ENST00000354473 OPRK1P41145 380 aa14.2□□□□□ -0.14
VPS72-201ENST00000354473 UBE2MP61081 183 aaKnown RBP14.2□□□□□ -0.14
VPS72-201ENST00000354473 BTNL8Q6UX41 500 aa14.2□□□□□ -0.14
VPS72-201ENST00000354473 LRTM2Q8N967 370 aa14.2□□□□□ -0.14
VPS72-201ENST00000354473 DUSP18Q8NEJ0 188 aa14.2□□□□□ -0.14
VPS72-201ENST00000354473 SLC24A4Q8NFF2 622 aa14.2□□□□□ -0.14
VPS72-201ENST00000354473 OR1S1Q8NH92 325 aa14.2□□□□□ -0.14
VPS72-201ENST00000354473 MARC2Q969Z3 335 aa14.2□□□□□ -0.14
VPS72-201ENST00000354473 HSPB7Q9UBY9 170 aa14.2□□□□□ -0.14
VPS72-201ENST00000354473 COL7A1Q02388 2944 aa14.19□□□□□ -0.14
VPS72-201ENST00000354473 FRMD6-AS1P0C7T7 363 aa14.19□□□□□ -0.14
VPS72-201ENST00000354473 C8orf88P0DMB2 117 aa14.19□□□□□ -0.14
VPS72-201ENST00000354473 NPBWR1P48145 328 aa14.19□□□□□ -0.14
VPS72-201ENST00000354473 GUCA2BQ16661 112 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms