RNA–Protein interactions for RNA: ENST00000353442.9

LMBR1-201, Transcript of limb development membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMBR1, Length 7,997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-201ENST00000353442 FABP5P3A8MUU1 101 aa11.25□□□□□ -0.61
LMBR1-201ENST00000353442 DAD1P61803 113 aa11.25□□□□□ -0.61
LMBR1-201ENST00000353442 OSR1Q8TAX0 266 aaPredicted RBP11.25□□□□□ -0.61
LMBR1-201ENST00000353442 LINC00477Q96M19 166 aa11.24□□□□□ -0.61
LMBR1-201ENST00000353442 DOCK2Q92608 1830 aa11.24□□□□□ -0.61
LMBR1-201ENST00000353442 ZNF561-AS1K7EIQ3 104 aa11.24□□□□□ -0.61
LMBR1-201ENST00000353442 NGFRP08138 427 aa11.24□□□□□ -0.61
LMBR1-201ENST00000353442 SPCS1Q9Y6A9 102 aa11.24□□□□□ -0.61
LMBR1-201ENST00000353442 TIAM2Q8IVF5 1701 aa11.24□□□□□ -0.61
LMBR1-201ENST00000353442 TRAV8-4A0A0B4J246 113 aa11.24□□□□□ -0.61
LMBR1-201ENST00000353442 ASPHD2Q6ICH7 369 aa11.24□□□□□ -0.61
LMBR1-201ENST00000353442 ATP5G3P48201 142 aa11.24□□□□□ -0.61
LMBR1-201ENST00000353442 TMEM155Q4W5P6 130 aa11.24□□□□□ -0.61
LMBR1-201ENST00000353442 MLNRO43193 412 aa11.24□□□□□ -0.61
LMBR1-201ENST00000353442 IGFL4Q6B9Z1 124 aa11.24□□□□□ -0.61
LMBR1-201ENST00000353442 GSN-AS1Q9NRJ2 163 aa11.24□□□□□ -0.61
LMBR1-201ENST00000353442 C22orf46C9J442 243 aa11.24□□□□□ -0.61
LMBR1-201ENST00000353442 TMEM133Q9H2Q1 129 aa11.24□□□□□ -0.61
LMBR1-201ENST00000353442 SCN9AQ15858 1988 aa11.23□□□□□ -0.61
LMBR1-201ENST00000353442 RND3P61587 244 aa11.23□□□□□ -0.61
LMBR1-201ENST00000353442 IGHV3-16A0A0C4DH30 117 aa11.23□□□□□ -0.61
LMBR1-201ENST00000353442 M0R2P5 195 aa11.23□□□□□ -0.61
LMBR1-201ENST00000353442 Q0VFX4 171 aa11.23□□□□□ -0.61
LMBR1-201ENST00000353442 ZNF672Q499Z4 452 aaPredicted RBP11.23□□□□□ -0.61
LMBR1-201ENST00000353442 VWC2LB2RUY7 222 aa11.23□□□□□ -0.61
LMBR1-201ENST00000353442 GATAD1Q8WUU5 269 aa11.23□□□□□ -0.61
LMBR1-201ENST00000353442 GDF15Q99988 308 aa11.23□□□□□ -0.61
LMBR1-201ENST00000353442 AHDC1Q5TGY3 1603 aaPredicted RBP11.23□□□□□ -0.61
LMBR1-201ENST00000353442 IGLV1-36A0A0B4J1U3 117 aa11.23□□□□□ -0.61
LMBR1-201ENST00000353442 CTAG1AP78358 180 aa11.23□□□□□ -0.61
LMBR1-201ENST00000353442 MDS2Q8NDY4 140 aa11.23□□□□□ -0.61
LMBR1-201ENST00000353442 GTF3AQ92664 365 aaKnown RBP11.23□□□□□ -0.61
LMBR1-201ENST00000353442 RNF125Q96EQ8 232 aa11.23□□□□□ -0.61
LMBR1-201ENST00000353442 NPIPB13A6NJU9 1138 aa11.23□□□□□ -0.61
LMBR1-201ENST00000353442 NPIPB5A8MRT5 1133 aa11.23□□□□□ -0.61
LMBR1-201ENST00000353442 GCM2O75603 506 aaPredicted RBP11.23□□□□□ -0.61
LMBR1-201ENST00000353442 MS4A6AQ9H2W1 248 aa11.23□□□□□ -0.61
LMBR1-201ENST00000353442 PSPNO60542 156 aa11.23□□□□□ -0.61
LMBR1-201ENST00000353442 RPL36AP83881 106 aaKnown RBP11.23□□□□□ -0.61
LMBR1-201ENST00000353442 RUSC1-AS1Q66K80 236 aa11.23□□□□□ -0.61
LMBR1-201ENST00000353442 ORMDL3Q8N138 153 aa11.23□□□□□ -0.61
LMBR1-201ENST00000353442 RPL36ALQ969Q0 106 aaKnown RBP11.23□□□□□ -0.61
LMBR1-201ENST00000353442 LSM4Q9Y4Z0 139 aaKnown RBP11.23□□□□□ -0.61
LMBR1-201ENST00000353442 LINC00312Q9Y6C7 94 aa11.23□□□□□ -0.61
LMBR1-201ENST00000353442 KDM3BQ7LBC6 1761 aa11.23□□□□□ -0.61
LMBR1-201ENST00000353442 ERCC8Q13216 396 aa11.22□□□□□ -0.61
LMBR1-201ENST00000353442 VAX1Q5SQQ9 334 aa11.22□□□□□ -0.61
LMBR1-201ENST00000353442 SAXO1Q8IYX7 474 aa11.22□□□□□ -0.61
LMBR1-201ENST00000353442 PLCH1Q4KWH8 1693 aa11.22□□□□□ -0.61
LMBR1-201ENST00000353442 NEUROG1Q92886 237 aa11.22□□□□□ -0.61
LMBR1-201ENST00000353442 Q96M66 194 aa11.22□□□□□ -0.61
LMBR1-201ENST00000353442 TRAV25A0A0B4J276 109 aa11.22□□□□□ -0.61
LMBR1-201ENST00000353442 PYYP10082 97 aa11.22□□□□□ -0.61
LMBR1-201ENST00000353442 ZNF525Q8N782 197 aa11.22□□□□□ -0.61
LMBR1-201ENST00000353442 SMIM8Q96KF7 97 aa11.22□□□□□ -0.61
LMBR1-201ENST00000353442 NHP2Q9NX24 153 aaKnown RBP11.22□□□□□ -0.61
LMBR1-201ENST00000353442 B4DSR2 109 aa11.22□□□□□ -0.61
LMBR1-201ENST00000353442 F8VVB4 439 aa11.22□□□□□ -0.61
LMBR1-201ENST00000353442 F8VWA3 439 aa11.22□□□□□ -0.61
LMBR1-201ENST00000353442 SSBP2P81877 361 aaPredicted RBP11.22□□□□□ -0.61
LMBR1-201ENST00000353442 PRB1P04280 392 aa11.22□□□□□ -0.61
LMBR1-201ENST00000353442 OR9G9P0C7N8 305 aa11.22□□□□□ -0.61
LMBR1-201ENST00000353442 RNASE7Q9H1E1 156 aaKnown RBP11.22□□□□□ -0.61
LMBR1-201ENST00000353442 CYSLTR1Q9Y271 337 aa11.22□□□□□ -0.61
LMBR1-201ENST00000353442 CXCL2P19875 107 aa11.22□□□□□ -0.61
LMBR1-201ENST00000353442 NKAPP1Q8N9T2 125 aa11.22□□□□□ -0.61
LMBR1-201ENST00000353442 THAP8Q8NA92 274 aa11.22□□□□□ -0.61
LMBR1-201ENST00000353442 ORAOV1Q8WV07 137 aa11.22□□□□□ -0.61
LMBR1-201ENST00000353442 SCN2AQ99250 2005 aa11.21□□□□□ -0.61
LMBR1-201ENST00000353442 DPRXA6NFQ7 191 aa11.21□□□□□ -0.61
LMBR1-201ENST00000353442 COX5BP10606 129 aa11.21□□□□□ -0.61
LMBR1-201ENST00000353442 C9orf62Q8N4C0 152 aa11.21□□□□□ -0.61
LMBR1-201ENST00000353442 RNF166Q96A37 237 aaPredicted RBP11.21□□□□□ -0.61
LMBR1-201ENST00000353442 SPRR3Q9UBC9 169 aa11.21□□□□□ -0.61
LMBR1-201ENST00000353442 GPX4P36969 197 aaPredicted RBP11.21□□□□□ -0.61
LMBR1-201ENST00000353442 TMEM30BQ3MIR4 351 aa11.21□□□□□ -0.61
LMBR1-201ENST00000353442 SRSF1Q07955 248 aaKnown RBP eCLIP11.21□□□□□ -0.613e-6■□□□□ 8.3
LMBR1-201ENST00000353442 FOXF2Q12947 444 aa11.21□□□□□ -0.61
LMBR1-201ENST00000353442 TMEM187Q14656 261 aa11.21□□□□□ -0.61
LMBR1-201ENST00000353442 SVILO95425 2214 aa11.21□□□□□ -0.62
LMBR1-201ENST00000353442 SS18Q15532 418 aa11.21□□□□□ -0.62
LMBR1-201ENST00000353442 MBNL3Q9NUK0 354 aaKnown RBP11.21□□□□□ -0.62
LMBR1-201ENST00000353442 DOCK1Q14185 1865 aa11.21□□□□□ -0.62
LMBR1-201ENST00000353442 HIGD1CA8MV81 97 aa11.21□□□□□ -0.62
LMBR1-201ENST00000353442 C15orf32Q32M92 178 aa11.21□□□□□ -0.62
LMBR1-201ENST00000353442 ZNF837Q96EG3 531 aaPredicted RBP11.21□□□□□ -0.62
LMBR1-201ENST00000353442 SYNJ2BPP57105 145 aa11.21□□□□□ -0.62
LMBR1-201ENST00000353442 ASCL2Q99929 193 aa11.21□□□□□ -0.62
LMBR1-201ENST00000353442 E9PLN8 166 aa11.2□□□□□ -0.62
LMBR1-201ENST00000353442 LINC01356Q8N9X3 169 aa11.2□□□□□ -0.62
LMBR1-201ENST00000353442 MSRB2Q9Y3D2 182 aa11.2□□□□□ -0.62
LMBR1-201ENST00000353442 FAM90A26D6RGX4 464 aa11.2□□□□□ -0.62
LMBR1-201ENST00000353442 J3QKU1 62 aa11.2□□□□□ -0.62
LMBR1-201ENST00000353442 NAT1P18440 290 aa11.2□□□□□ -0.62
LMBR1-201ENST00000353442 ZNF600Q6ZNG1 722 aa11.2□□□□□ -0.62
LMBR1-201ENST00000353442 XCL2Q9UBD3 114 aa11.2□□□□□ -0.62
LMBR1-201ENST00000353442 DKK4Q9UBT3 224 aa11.2□□□□□ -0.62
LMBR1-201ENST00000353442 FAM90A10PA6NDY2 464 aa11.2□□□□□ -0.62
LMBR1-201ENST00000353442 FAM90A18PA6NE21 464 aa11.2□□□□□ -0.62
LMBR1-201ENST00000353442 FAM90A16PA6NEW6 464 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms