RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 CTDSP1Q9GZU7 261 aa11.33□□□□□ -0.6
TRIM4-201ENST00000349062 HILPDAQ9Y5L2 63 aa11.33□□□□□ -0.6
TRIM4-201ENST00000349062 SIAH2O43255 324 aa11.33□□□□□ -0.6
TRIM4-201ENST00000349062 ATP5G3P48201 142 aa11.33□□□□□ -0.6
TRIM4-201ENST00000349062 HSPE1P61604 102 aaKnown RBP11.33□□□□□ -0.6
TRIM4-201ENST00000349062 PLGLAQ15195 96 aa11.33□□□□□ -0.6
TRIM4-201ENST00000349062 TREML4Q6UXN2 200 aa11.33□□□□□ -0.6
TRIM4-201ENST00000349062 TMEM68Q96MH6 324 aa11.33□□□□□ -0.6
TRIM4-201ENST00000349062 IMMP2LQ96T52 175 aa11.33□□□□□ -0.6
TRIM4-201ENST00000349062 LINC00312Q9Y6C7 94 aa11.33□□□□□ -0.6
TRIM4-201ENST00000349062 PMS2P5A8MQ11 134 aa11.32□□□□□ -0.6
TRIM4-201ENST00000349062 E7EUB6 86 aa11.32□□□□□ -0.6
TRIM4-201ENST00000349062 GCGP01275 180 aa11.32□□□□□ -0.6
TRIM4-201ENST00000349062 CGB3P0DN86 165 aa11.32□□□□□ -0.6
TRIM4-201ENST00000349062 CGB7P0DN87 165 aa11.32□□□□□ -0.6
TRIM4-201ENST00000349062 CNTFRP26992 372 aa11.32□□□□□ -0.6
TRIM4-201ENST00000349062 CNN1P51911 297 aaKnown RBP11.32□□□□□ -0.6
TRIM4-201ENST00000349062 TMEM170AQ8WVE7 144 aa11.32□□□□□ -0.6
TRIM4-201ENST00000349062 FLYWCH2Q96CP2 140 aaKnown RBP11.32□□□□□ -0.6
TRIM4-201ENST00000349062 NEU1Q99519 415 aa11.32□□□□□ -0.6
TRIM4-201ENST00000349062 LPAR2Q9HBW0 351 aa11.32□□□□□ -0.6
TRIM4-201ENST00000349062 USP9XQ93008 2570 aaPredicted RBP11.32□□□□□ -0.6
TRIM4-201ENST00000349062 NUPR1O60356 82 aa11.32□□□□□ -0.6
TRIM4-201ENST00000349062 OR10J4P0C629 311 aa11.32□□□□□ -0.6
TRIM4-201ENST00000349062 UQCRFS1P47985 274 aa11.32□□□□□ -0.6
TRIM4-201ENST00000349062 TFPI2P48307 235 aa11.32□□□□□ -0.6
TRIM4-201ENST00000349062 KLRB1Q12918 225 aa11.32□□□□□ -0.6
TRIM4-201ENST00000349062 FAM222BQ8WU58 562 aa11.32□□□□□ -0.6
TRIM4-201ENST00000349062 DERL1Q9BUN8 251 aa11.32□□□□□ -0.6
TRIM4-201ENST00000349062 RAB9BQ9NP90 201 aa11.32□□□□□ -0.6
TRIM4-201ENST00000349062 KBTBD11O94819 623 aa11.31□□□□□ -0.6
TRIM4-201ENST00000349062 ARL14EPLP0DKL9 152 aa11.31□□□□□ -0.6
TRIM4-201ENST00000349062 ACOT6Q3I5F7 207 aaPredicted RBP11.31□□□□□ -0.6
TRIM4-201ENST00000349062 TDRG1Q3Y452 100 aa11.31□□□□□ -0.6
TRIM4-201ENST00000349062 ZNF835Q9Y2P0 537 aa11.31□□□□□ -0.6
TRIM4-201ENST00000349062 TLN2Q9Y4G6 2542 aa11.31□□□□□ -0.6
TRIM4-201ENST00000349062 C15orf61A6NNL5 157 aa11.31□□□□□ -0.6
TRIM4-201ENST00000349062 RPP30P78346 268 aaKnown RBP11.31□□□□□ -0.6
TRIM4-201ENST00000349062 KCNIP4Q6PIL6 250 aa11.31□□□□□ -0.6
TRIM4-201ENST00000349062 OR4P4Q8NGL7 312 aa11.31□□□□□ -0.6
TRIM4-201ENST00000349062 OR2T6Q8NHC8 308 aa11.31□□□□□ -0.6
TRIM4-201ENST00000349062 MGST2Q99735 147 aa11.31□□□□□ -0.6
TRIM4-201ENST00000349062 C11orf94C9JXX5 98 aa11.31□□□□□ -0.6
TRIM4-201ENST00000349062 FOXH1O75593 365 aa11.31□□□□□ -0.6
TRIM4-201ENST00000349062 LOXP28300 417 aaPredicted RBP11.31□□□□□ -0.6
TRIM4-201ENST00000349062 ARSJQ5FYB0 599 aaPredicted RBP11.31□□□□□ -0.6
TRIM4-201ENST00000349062 CYP2G1PQ6ZSU1 146 aa11.31□□□□□ -0.6
TRIM4-201ENST00000349062 OR9G1Q8NH87 305 aa11.31□□□□□ -0.6
TRIM4-201ENST00000349062 VN1R17PQ8TDU5 208 aa11.31□□□□□ -0.6
TRIM4-201ENST00000349062 PSMG3Q9BT73 122 aaPredicted RBP11.31□□□□□ -0.6
TRIM4-201ENST00000349062 CTXND1A0A1B0GTU2 59 aa11.3□□□□□ -0.6
TRIM4-201ENST00000349062 NDUFB4O95168 129 aa11.3□□□□□ -0.6
TRIM4-201ENST00000349062 NPSP0C0P6 89 aa11.3□□□□□ -0.6
TRIM4-201ENST00000349062 CA7P43166 264 aa11.3□□□□□ -0.6
TRIM4-201ENST00000349062 ASPHD1Q5U4P2 390 aa11.3□□□□□ -0.6
TRIM4-201ENST00000349062 DPPA3Q6W0C5 159 aa11.3□□□□□ -0.6
TRIM4-201ENST00000349062 SLC25A48Q6ZT89 311 aaKnown RBP11.3□□□□□ -0.6
TRIM4-201ENST00000349062 SAMD10Q9BYL1 202 aa11.3□□□□□ -0.6
TRIM4-201ENST00000349062 SEPSECSQ9HD40 501 aaKnown RBP11.3□□□□□ -0.6
TRIM4-201ENST00000349062 TMEM242Q9NWH2 141 aa11.3□□□□□ -0.6
TRIM4-201ENST00000349062 NAGKQ9UJ70 344 aa11.3□□□□□ -0.6
TRIM4-201ENST00000349062 GOLT1BQ9Y3E0 138 aa11.3□□□□□ -0.6
TRIM4-201ENST00000349062 S4R3C0 116 aa11.3□□□□□ -0.6
TRIM4-201ENST00000349062 OPRK1P41145 380 aa11.3□□□□□ -0.6
TRIM4-201ENST00000349062 HES1Q14469 280 aa11.3□□□□□ -0.6
TRIM4-201ENST00000349062 LBHQ53QV2 105 aaPredicted RBP11.3□□□□□ -0.6
TRIM4-201ENST00000349062 SGMS2Q8NHU3 365 aa11.3□□□□□ -0.6
TRIM4-201ENST00000349062 ABCA12Q86UK0 2595 aa11.3□□□□□ -0.6
TRIM4-201ENST00000349062 OR7C2O60412 319 aa11.3□□□□□ -0.6
TRIM4-201ENST00000349062 ADORA2A-AS1P86434 159 aa11.3□□□□□ -0.6
TRIM4-201ENST00000349062 ATP6V1FQ16864 119 aa11.3□□□□□ -0.6
TRIM4-201ENST00000349062 RBM14Q96PK6 669 aaKnown RBP11.3□□□□□ -0.6
TRIM4-201ENST00000349062 UBTD1Q9HAC8 227 aa11.3□□□□□ -0.6
TRIM4-201ENST00000349062 TRAV34A0A0B4J273 112 aa11.29□□□□□ -0.6
TRIM4-201ENST00000349062 TEX50A0A1B0GTY4 177 aa11.29□□□□□ -0.6
TRIM4-201ENST00000349062 OR10J1P30954 320 aa11.29□□□□□ -0.6
TRIM4-201ENST00000349062 VDAC2P45880 294 aaPredicted RBP11.29□□□□□ -0.6
TRIM4-201ENST00000349062 ERVFC1-1P60608 527 aa11.29□□□□□ -0.6
TRIM4-201ENST00000349062 KLRD1Q13241 179 aa11.29□□□□□ -0.6
TRIM4-201ENST00000349062 OR5I1Q13606 314 aa11.29□□□□□ -0.6
TRIM4-201ENST00000349062 TNXAQ16473 311 aa11.29□□□□□ -0.6
TRIM4-201ENST00000349062 ZNF672Q499Z4 452 aaPredicted RBP11.29□□□□□ -0.6
TRIM4-201ENST00000349062 PNKDQ8N490 385 aa11.29□□□□□ -0.6
TRIM4-201ENST00000349062 DDB2Q92466 427 aa11.29□□□□□ -0.6
TRIM4-201ENST00000349062 A0A1B0GWJ7 208 aa11.29□□□□□ -0.6
TRIM4-201ENST00000349062 DMRTA1Q5VZB9 504 aa11.29□□□□□ -0.6
TRIM4-201ENST00000349062 TEX36Q5VZQ5 186 aa11.29□□□□□ -0.6
TRIM4-201ENST00000349062 BAGE3Q86Y29 109 aa11.29□□□□□ -0.6
TRIM4-201ENST00000349062 BAGE2Q86Y30 109 aa11.29□□□□□ -0.6
TRIM4-201ENST00000349062 STPG3Q8N7X2 389 aa11.29□□□□□ -0.6
TRIM4-201ENST00000349062 MBD3L1Q8WWY6 194 aa11.29□□□□□ -0.6
TRIM4-201ENST00000349062 ZNF462Q96JM2 2506 aa11.29□□□□□ -0.6
TRIM4-201ENST00000349062 IL3RAP26951 378 aa11.28□□□□□ -0.6
TRIM4-201ENST00000349062 RAB4BP61018 213 aa11.28□□□□□ -0.6
TRIM4-201ENST00000349062 ZNF439Q8NDP4 499 aa11.28□□□□□ -0.6
TRIM4-201ENST00000349062 P2RX4Q99571 388 aa11.28□□□□□ -0.6
TRIM4-201ENST00000349062 MANBALQ9NQG1 85 aa11.28□□□□□ -0.6
TRIM4-201ENST00000349062 POLR3KQ9Y2Y1 108 aaPredicted RBP11.28□□□□□ -0.6
TRIM4-201ENST00000349062 TRAV1-1A0A0B4J248 108 aa11.28□□□□□ -0.6
TRIM4-201ENST00000349062 PPIAL4CA0A0B4J2A2 164 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms