RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 OR5AL1P0C617 328 aa8.47□□□□□ -1.05
CHRNA1-202ENST00000348749 SMIM17P0DL12 118 aa8.47□□□□□ -1.05
CHRNA1-202ENST00000348749 HOXC12P31275 282 aa8.47□□□□□ -1.05
CHRNA1-202ENST00000348749 ZXDAP98168 799 aa8.47□□□□□ -1.05
CHRNA1-202ENST00000348749 PRSS57Q6UWY2 283 aa8.47□□□□□ -1.05
CHRNA1-202ENST00000348749 MDP1Q86V88 176 aa8.47□□□□□ -1.05
CHRNA1-202ENST00000348749 C5orf17Q8NAS9 161 aa8.47□□□□□ -1.05
CHRNA1-202ENST00000348749 NUP35Q8NFH5 326 aa8.47□□□□□ -1.05
CHRNA1-202ENST00000348749 FAM168AQ92567 244 aa8.47□□□□□ -1.05
CHRNA1-202ENST00000348749 CHRDL1Q9BU40 450 aa8.47□□□□□ -1.05
CHRNA1-202ENST00000348749 TTTY12Q9BZ98 90 aa8.47□□□□□ -1.05
CHRNA1-202ENST00000348749 SDK1Q7Z5N4 2213 aa8.47□□□□□ -1.05
CHRNA1-202ENST00000348749 DOCK10Q96BY6 2186 aa8.47□□□□□ -1.05
CHRNA1-202ENST00000348749 PTPRBP23467 1997 aa8.46□□□□□ -1.05
CHRNA1-202ENST00000348749 A0A087X0K7 114 aa8.46□□□□□ -1.05
CHRNA1-202ENST00000348749 IGHV1-24A0A0C4DH33 117 aa8.46□□□□□ -1.05
CHRNA1-202ENST00000348749 FAM231BA6NCW3 169 aa8.46□□□□□ -1.05
CHRNA1-202ENST00000348749 C9orf118A6NHY6 69 aa8.46□□□□□ -1.05
CHRNA1-202ENST00000348749 H3BRM9 83 aa8.46□□□□□ -1.05
CHRNA1-202ENST00000348749 LEPROTL1O95214 131 aa8.46□□□□□ -1.05
CHRNA1-202ENST00000348749 CA1P00915 261 aaPredicted RBP8.46□□□□□ -1.05
CHRNA1-202ENST00000348749 SP1P08047 785 aa8.46□□□□□ -1.05
CHRNA1-202ENST00000348749 ADH4P08319 380 aa8.46□□□□□ -1.05
CHRNA1-202ENST00000348749 COX8AP10176 69 aa8.46□□□□□ -1.05
CHRNA1-202ENST00000348749 PRAMEF5Q5TYX0 476 aa8.46□□□□□ -1.05
CHRNA1-202ENST00000348749 PRAMEF6Q5VXH4 476 aa8.46□□□□□ -1.05
CHRNA1-202ENST00000348749 SPINK14Q6IE38 97 aa8.46□□□□□ -1.05
CHRNA1-202ENST00000348749 NHLRC2Q8NBF2 726 aa8.46□□□□□ -1.05
CHRNA1-202ENST00000348749 OR4A16Q8NH70 328 aa8.46□□□□□ -1.05
CHRNA1-202ENST00000348749 TMEM186Q96B77 213 aa8.46□□□□□ -1.05
CHRNA1-202ENST00000348749 ZNF503Q96F45 646 aa8.46□□□□□ -1.05
CHRNA1-202ENST00000348749 USP34Q70CQ2 3546 aa8.46□□□□□ -1.05
CHRNA1-202ENST00000348749 MED12LQ86YW9 2145 aa8.46□□□□□ -1.06
CHRNA1-202ENST00000348749 K7EP34 96 aa8.46□□□□□ -1.06
CHRNA1-202ENST00000348749 CFIP05156 583 aa8.46□□□□□ -1.06
CHRNA1-202ENST00000348749 PSG3Q16557 428 aa8.46□□□□□ -1.06
CHRNA1-202ENST00000348749 SAMD13Q5VXD3 122 aa8.46□□□□□ -1.06
CHRNA1-202ENST00000348749 C2orf91Q6ZV80 131 aa8.46□□□□□ -1.06
CHRNA1-202ENST00000348749 WFDC8Q8IUA0 241 aa8.46□□□□□ -1.06
CHRNA1-202ENST00000348749 ABHD12Q8N2K0 398 aa8.46□□□□□ -1.06
CHRNA1-202ENST00000348749 SSBP3Q9BWW4 388 aaPredicted RBP8.46□□□□□ -1.06
CHRNA1-202ENST00000348749 SMPXQ9UHP9 88 aa8.46□□□□□ -1.06
CHRNA1-202ENST00000348749 ZNHIT1O43257 154 aa8.45□□□□□ -1.06
CHRNA1-202ENST00000348749 LIPFP07098 398 aa8.45□□□□□ -1.06
CHRNA1-202ENST00000348749 SPINK2P20155 84 aa8.45□□□□□ -1.06
CHRNA1-202ENST00000348749 ACP1P24666 158 aa8.45□□□□□ -1.06
CHRNA1-202ENST00000348749 KIR2DS2P43631 304 aa8.45□□□□□ -1.06
CHRNA1-202ENST00000348749 TAS2R45P59539 299 aa8.45□□□□□ -1.06
CHRNA1-202ENST00000348749 FAM53AQ6NSI3 398 aaPredicted RBP8.45□□□□□ -1.06
CHRNA1-202ENST00000348749 TMEM251Q8N6I4 163 aa8.45□□□□□ -1.06
CHRNA1-202ENST00000348749 H1FXQ92522 213 aaKnown RBP8.45□□□□□ -1.06
CHRNA1-202ENST00000348749 SNRNP40Q96DI7 357 aaKnown RBP8.45□□□□□ -1.06
CHRNA1-202ENST00000348749 C19orf24Q9BVV8 132 aa8.45□□□□□ -1.06
CHRNA1-202ENST00000348749 PLEKHA3Q9HB20 300 aa8.45□□□□□ -1.06
CHRNA1-202ENST00000348749 DUSP13Q9UII6 198 aa8.45□□□□□ -1.06
CHRNA1-202ENST00000348749 KLF13Q9Y2Y9 288 aaPredicted RBP8.45□□□□□ -1.06
CHRNA1-202ENST00000348749 COL27A1Q8IZC6 1860 aaPredicted RBP8.45□□□□□ -1.06
CHRNA1-202ENST00000348749 DIDO1Q9BTC0 2240 aaKnown RBP8.45□□□□□ -1.06
CHRNA1-202ENST00000348749 SH2D7A6NKC9 451 aaPredicted RBP8.44□□□□□ -1.06
CHRNA1-202ENST00000348749 PRSS47A8MTI9 375 aa8.44□□□□□ -1.06
CHRNA1-202ENST00000348749 CELA3AP09093 270 aa8.44□□□□□ -1.06
CHRNA1-202ENST00000348749 IGFBP2P18065 325 aa8.44□□□□□ -1.06
CHRNA1-202ENST00000348749 HTR1DP28221 377 aa8.44□□□□□ -1.06
CHRNA1-202ENST00000348749 MAGEA5P43359 124 aa8.44□□□□□ -1.06
CHRNA1-202ENST00000348749 NHLH1Q02575 133 aa8.44□□□□□ -1.06
CHRNA1-202ENST00000348749 FOXF2Q12947 444 aa8.44□□□□□ -1.06
CHRNA1-202ENST00000348749 TMEM97Q5BJF2 176 aa8.44□□□□□ -1.06
CHRNA1-202ENST00000348749 ZNF841Q6ZN19 808 aa8.44□□□□□ -1.06
CHRNA1-202ENST00000348749 LINC00173Q6ZV60 143 aa8.44□□□□□ -1.06
CHRNA1-202ENST00000348749 AP1S3Q96PC3 154 aa8.44□□□□□ -1.06
CHRNA1-202ENST00000348749 NABP2Q9BQ15 211 aa8.44□□□□□ -1.06
CHRNA1-202ENST00000348749 SSBP4Q9BWG4 385 aaPredicted RBP8.44□□□□□ -1.06
CHRNA1-202ENST00000348749 MAP1LC3CQ9BXW4 147 aa8.44□□□□□ -1.06
CHRNA1-202ENST00000348749 SPRY4Q9C004 299 aa8.44□□□□□ -1.06
CHRNA1-202ENST00000348749 CXXC4Q9H2H0 198 aa8.44□□□□□ -1.06
CHRNA1-202ENST00000348749 FSCN3Q9NQT6 498 aa8.44□□□□□ -1.06
CHRNA1-202ENST00000348749 ZNF355PQ9NSJ1 428 aa8.44□□□□□ -1.06
CHRNA1-202ENST00000348749 IDI2-AS1Q9NZ38 188 aa8.44□□□□□ -1.06
CHRNA1-202ENST00000348749 TCF19Q9Y242 345 aa8.44□□□□□ -1.06
CHRNA1-202ENST00000348749 SPINT2O43291 252 aa8.44□□□□□ -1.06
CHRNA1-202ENST00000348749 PSPNO60542 156 aa8.44□□□□□ -1.06
CHRNA1-202ENST00000348749 ACTL6BO94805 426 aa8.44□□□□□ -1.06
CHRNA1-202ENST00000348749 PPIAL4GP0DN37 164 aa8.44□□□□□ -1.06
CHRNA1-202ENST00000348749 COL8A2P25067 703 aa8.44□□□□□ -1.06
CHRNA1-202ENST00000348749 LINC00205P59089 165 aa8.44□□□□□ -1.06
CHRNA1-202ENST00000348749 ERVK-16P61578 105 aa8.44□□□□□ -1.06
CHRNA1-202ENST00000348749 LINC01545Q5VT33 79 aa8.44□□□□□ -1.06
CHRNA1-202ENST00000348749 INO80CQ6PI98 192 aaPredicted RBP8.44□□□□□ -1.06
CHRNA1-202ENST00000348749 BPIFA4PQ86YQ2 179 aa8.44□□□□□ -1.06
CHRNA1-202ENST00000348749 OR5A1Q8NGJ0 315 aa8.44□□□□□ -1.06
CHRNA1-202ENST00000348749 OR1N2Q8NGR9 330 aa8.44□□□□□ -1.06
CHRNA1-202ENST00000348749 Q8TCH9 128 aa8.44□□□□□ -1.06
CHRNA1-202ENST00000348749 DPF1Q92782 380 aa8.44□□□□□ -1.06
CHRNA1-202ENST00000348749 GCM1Q9NP62 436 aa8.44□□□□□ -1.06
CHRNA1-202ENST00000348749 LOXL2Q9Y4K0 774 aa8.44□□□□□ -1.06
CHRNA1-202ENST00000348749 USF3Q68DE3 2245 aa8.43□□□□□ -1.06
CHRNA1-202ENST00000348749 PCSK5Q92824 1860 aa8.43□□□□□ -1.06
CHRNA1-202ENST00000348749 A6NDN8 102 aa8.43□□□□□ -1.06
CHRNA1-202ENST00000348749 HIGD1CA8MV81 97 aa8.43□□□□□ -1.06
CHRNA1-202ENST00000348749 AHRRA9YTQ3 701 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms