RNA–Protein interactions for RNA: ENST00000347617.10

HMGA1-202, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-202ENST00000347617 UBE2G1P62253 170 aa13.02□□□□□ -0.32
HMGA1-202ENST00000347617 RHOGP84095 191 aa13.02□□□□□ -0.32
HMGA1-202ENST00000347617 AESQ08117 197 aa13.02□□□□□ -0.32
HMGA1-202ENST00000347617 C3orf36Q3SXR2 165 aa13.02□□□□□ -0.32
HMGA1-202ENST00000347617 PET117Q6UWS5 81 aa13.02□□□□□ -0.32
HMGA1-202ENST00000347617 SSMEM1Q8WWF3 244 aa13.02□□□□□ -0.32
HMGA1-202ENST00000347617 NEUROG1Q92886 237 aa13.02□□□□□ -0.32
HMGA1-202ENST00000347617 CLEC7AQ9BXN2 247 aa13.02□□□□□ -0.32
HMGA1-202ENST00000347617 ST20Q9HBF5 79 aa13.02□□□□□ -0.32
HMGA1-202ENST00000347617 ZNHIT1O43257 154 aa13.02□□□□□ -0.33
HMGA1-202ENST00000347617 OR2J3O76001 311 aa13.02□□□□□ -0.33
HMGA1-202ENST00000347617 CRYBB3P26998 211 aa13.02□□□□□ -0.33
HMGA1-202ENST00000347617 PSG5Q15238 335 aa13.02□□□□□ -0.33
HMGA1-202ENST00000347617 SPATA31B1PQ5VZV4 182 aa13.02□□□□□ -0.33
HMGA1-202ENST00000347617 ACP7Q6ZNF0 438 aa13.02□□□□□ -0.33
HMGA1-202ENST00000347617 ATP5L2Q7Z4Y8 100 aa13.02□□□□□ -0.33
HMGA1-202ENST00000347617 C1orf159Q96HA4 380 aa13.02□□□□□ -0.33
HMGA1-202ENST00000347617 IGF2BP2-AS1Q96M15 143 aa13.02□□□□□ -0.33
HMGA1-202ENST00000347617 FOXA2Q9Y261 457 aaPredicted RBP13.02□□□□□ -0.33
HMGA1-202ENST00000347617 DIDO1Q9BTC0 2240 aaKnown RBP13.02□□□□□ -0.33
HMGA1-202ENST00000347617 URB1O60287 2271 aaKnown RBP13.02□□□□□ -0.33
HMGA1-202ENST00000347617 LOC105371242A0A075B767 164 aa13.01□□□□□ -0.33
HMGA1-202ENST00000347617 FAM181BA6NEQ2 426 aa13.01□□□□□ -0.33
HMGA1-202ENST00000347617 C15orf61A6NNL5 157 aa13.01□□□□□ -0.33
HMGA1-202ENST00000347617 IGLV1-44P01699 117 aa13.01□□□□□ -0.33
HMGA1-202ENST00000347617 UNQ5815/PRO19632Q6UWF5 114 aa13.01□□□□□ -0.33
HMGA1-202ENST00000347617 Q8NA96 180 aa13.01□□□□□ -0.33
HMGA1-202ENST00000347617 OR4S2Q8NH73 311 aa13.01□□□□□ -0.33
HMGA1-202ENST00000347617 S1PR3Q99500 378 aa13.01□□□□□ -0.33
HMGA1-202ENST00000347617 MRPL32Q9BYC8 188 aaKnown RBP13.01□□□□□ -0.33
HMGA1-202ENST00000347617 CXXC4Q9H2H0 198 aa13.01□□□□□ -0.33
HMGA1-202ENST00000347617 PLEKHA3Q9HB20 300 aa13.01□□□□□ -0.33
HMGA1-202ENST00000347617 RAB9BQ9NP90 201 aa13.01□□□□□ -0.33
HMGA1-202ENST00000347617 APC2O95996 2303 aa13.01□□□□□ -0.33
HMGA1-202ENST00000347617 J3QR06 171 aa13□□□□□ -0.33
HMGA1-202ENST00000347617 FRMD6-AS1P0C7T7 363 aa13□□□□□ -0.33
HMGA1-202ENST00000347617 NTF3P20783 257 aa13□□□□□ -0.33
HMGA1-202ENST00000347617 HSPE1P61604 102 aaKnown RBP13□□□□□ -0.33
HMGA1-202ENST00000347617 SMIM21Q3B7S5 101 aa13□□□□□ -0.33
HMGA1-202ENST00000347617 KIAA1644Q3SXP7 199 aa13□□□□□ -0.33
HMGA1-202ENST00000347617 DOLPP1Q86YN1 238 aa13□□□□□ -0.33
HMGA1-202ENST00000347617 LYG1Q8N1E2 194 aa13□□□□□ -0.33
HMGA1-202ENST00000347617 OR4F17Q8NGA8 305 aa13□□□□□ -0.33
HMGA1-202ENST00000347617 GRAMD2BQ96HH9 432 aa13□□□□□ -0.33
HMGA1-202ENST00000347617 WNT10AQ9GZT5 417 aa13□□□□□ -0.33
HMGA1-202ENST00000347617 RNASE7Q9H1E1 156 aaKnown RBP13□□□□□ -0.33
HMGA1-202ENST00000347617 TMEM140Q9NV12 185 aa13□□□□□ -0.33
HMGA1-202ENST00000347617 ZNF835Q9Y2P0 537 aa13□□□□□ -0.33
HMGA1-202ENST00000347617 C3orf80F5H4A9 247 aa12.99□□□□□ -0.33
HMGA1-202ENST00000347617 C15orf65H3BRN8 121 aa12.99□□□□□ -0.33
HMGA1-202ENST00000347617 M0R2Z0 102 aa12.99□□□□□ -0.33
HMGA1-202ENST00000347617 PRRG2O14669 202 aa12.99□□□□□ -0.33
HMGA1-202ENST00000347617 TOX4O94842 621 aa12.99□□□□□ -0.33
HMGA1-202ENST00000347617 IGLV2-8P01709 118 aa12.99□□□□□ -0.33
HMGA1-202ENST00000347617 GRPP07492 148 aa12.99□□□□□ -0.33
HMGA1-202ENST00000347617 MRPL54Q6P161 138 aaKnown RBP12.99□□□□□ -0.33
HMGA1-202ENST00000347617 BHLHA15Q7RTS1 189 aaPredicted RBP12.99□□□□□ -0.33
HMGA1-202ENST00000347617 CXorf67Q86X51 503 aaPredicted RBP12.99□□□□□ -0.33
HMGA1-202ENST00000347617 ABHD12Q8N2K0 398 aa12.99□□□□□ -0.33
HMGA1-202ENST00000347617 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.99□□□□□ -0.33
HMGA1-202ENST00000347617 NABP2Q9BQ15 211 aa12.99□□□□□ -0.33
HMGA1-202ENST00000347617 PPIAL4AQ9Y536 164 aa12.99□□□□□ -0.33
HMGA1-202ENST00000347617 ACACAQ13085 2346 aa12.99□□□□□ -0.33
HMGA1-202ENST00000347617 FOXH1O75593 365 aa12.99□□□□□ -0.33
HMGA1-202ENST00000347617 MZT1Q08AG7 82 aa12.99□□□□□ -0.33
HMGA1-202ENST00000347617 TIMM23BQ5SRD1 257 aa12.99□□□□□ -0.33
HMGA1-202ENST00000347617 MIR17HGQ75NE6 70 aa12.99□□□□□ -0.33
HMGA1-202ENST00000347617 OR13A1Q8NGR1 328 aa12.99□□□□□ -0.33
HMGA1-202ENST00000347617 TET2Q6N021 2002 aaPredicted RBP12.98□□□□□ -0.33
HMGA1-202ENST00000347617 TRAV34A0A0B4J273 112 aa12.98□□□□□ -0.33
HMGA1-202ENST00000347617 M0R1X1 148 aa12.98□□□□□ -0.33
HMGA1-202ENST00000347617 CEBPDP49716 269 aaPredicted RBP12.98□□□□□ -0.33
HMGA1-202ENST00000347617 PPP1R35Q8TAP8 253 aa12.98□□□□□ -0.33
HMGA1-202ENST00000347617 MBD6Q96DN6 1003 aa12.98□□□□□ -0.33
HMGA1-202ENST00000347617 ADTRPQ96IZ2 230 aa12.98□□□□□ -0.33
HMGA1-202ENST00000347617 TMEM70Q9BUB7 260 aa12.98□□□□□ -0.33
HMGA1-202ENST00000347617 SERTAD4Q9NUC0 356 aa12.98□□□□□ -0.33
HMGA1-202ENST00000347617 CRXO43186 299 aaPredicted RBP12.97□□□□□ -0.33
HMGA1-202ENST00000347617 FXYD3Q14802 87 aa12.97□□□□□ -0.33
HMGA1-202ENST00000347617 POU2AF1Q16633 256 aa12.97□□□□□ -0.33
HMGA1-202ENST00000347617 CR1LQ2VPA4 569 aa12.97□□□□□ -0.33
HMGA1-202ENST00000347617 C12orf54Q6X4T0 127 aa12.97□□□□□ -0.33
HMGA1-202ENST00000347617 FAM19A2Q8N3H0 131 aa12.97□□□□□ -0.33
HMGA1-202ENST00000347617 SLC25A40Q8TBP6 338 aa12.97□□□□□ -0.33
HMGA1-202ENST00000347617 SMIM12Q96EX1 92 aa12.97□□□□□ -0.33
HMGA1-202ENST00000347617 TMEM14BQ9NUH8 114 aa12.97□□□□□ -0.33
HMGA1-202ENST00000347617 SLC25A15Q9Y619 301 aa12.97□□□□□ -0.33
HMGA1-202ENST00000347617 SOX21Q9Y651 276 aaPredicted RBP12.97□□□□□ -0.33
HMGA1-202ENST00000347617 ZFHX4Q86UP3 3567 aa12.97□□□□□ -0.33
HMGA1-202ENST00000347617 LOC400499M0QZD8 3231 aa12.97□□□□□ -0.33
HMGA1-202ENST00000347617 CELA3BP08861 270 aa12.97□□□□□ -0.33
HMGA1-202ENST00000347617 C8orf88P0DMB2 117 aa12.97□□□□□ -0.33
HMGA1-202ENST00000347617 MGST1P10620 155 aaKnown RBP12.97□□□□□ -0.33
HMGA1-202ENST00000347617 IGFBP2P18065 325 aa12.97□□□□□ -0.33
HMGA1-202ENST00000347617 SSTR5P35346 364 aa12.97□□□□□ -0.33
HMGA1-202ENST00000347617 TCL1AP56279 114 aa12.97□□□□□ -0.33
HMGA1-202ENST00000347617 VAMP3Q15836 100 aa12.97□□□□□ -0.33
HMGA1-202ENST00000347617 TNXAQ16473 311 aa12.97□□□□□ -0.33
HMGA1-202ENST00000347617 SSX8Q7RTT4 187 aa12.97□□□□□ -0.33
HMGA1-202ENST00000347617 FAM90A1Q86YD7 464 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms