RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 TRIM77I1YAP6 450 aa8.68□□□□□ -1.02
ECM1-201ENST00000346569 REG1AP05451 166 aa8.68□□□□□ -1.02
ECM1-201ENST00000346569 BLOC1S1P78537 153 aa8.68□□□□□ -1.02
ECM1-201ENST00000346569 KRTAP1-1Q07627 177 aa8.68□□□□□ -1.02
ECM1-201ENST00000346569 GAMTQ14353 236 aa8.68□□□□□ -1.02
ECM1-201ENST00000346569 DEFB112Q30KQ8 113 aa8.68□□□□□ -1.02
ECM1-201ENST00000346569 SLC25A24Q6NUK1 477 aa8.68□□□□□ -1.02
ECM1-201ENST00000346569 BTNL8Q6UX41 500 aa8.68□□□□□ -1.02
ECM1-201ENST00000346569 SPNS3Q6ZMD2 512 aa8.68□□□□□ -1.02
ECM1-201ENST00000346569 TMEM144Q7Z5S9 345 aa8.68□□□□□ -1.02
ECM1-201ENST00000346569 TTC9CQ8N5M4 171 aa8.68□□□□□ -1.02
ECM1-201ENST00000346569 CXorf58Q96LI9 332 aa8.68□□□□□ -1.02
ECM1-201ENST00000346569 RASL11BQ9BPW5 248 aa8.68□□□□□ -1.02
ECM1-201ENST00000346569 SLC25A33Q9BSK2 321 aa8.68□□□□□ -1.02
ECM1-201ENST00000346569 WNT10AQ9GZT5 417 aa8.68□□□□□ -1.02
ECM1-201ENST00000346569 FBXO7Q9Y3I1 522 aa8.68□□□□□ -1.02
ECM1-201ENST00000346569 ZANQ9Y493 2812 aa8.68□□□□□ -1.02
ECM1-201ENST00000346569 MTORP42345 2549 aa8.67□□□□□ -1.02
ECM1-201ENST00000346569 ZNF705EA8MWA4 302 aaPredicted RBP8.67□□□□□ -1.02
ECM1-201ENST00000346569 MPDU1O75352 247 aa8.67□□□□□ -1.02
ECM1-201ENST00000346569 FGF7P21781 194 aa8.67□□□□□ -1.02
ECM1-201ENST00000346569 KLK9Q2XQG4 91 aa8.67□□□□□ -1.02
ECM1-201ENST00000346569 TMEM182Q6ZP80 229 aaPredicted RBP8.67□□□□□ -1.02
ECM1-201ENST00000346569 C19orf35Q6ZS72 473 aa8.67□□□□□ -1.02
ECM1-201ENST00000346569 ARPC1AQ92747 370 aa8.67□□□□□ -1.02
ECM1-201ENST00000346569 HSPB9Q9BQS6 159 aa8.67□□□□□ -1.02
ECM1-201ENST00000346569 FAM103A1Q9BTL3 118 aaKnown RBP8.67□□□□□ -1.02
ECM1-201ENST00000346569 NPCDR1Q9BY65 106 aa8.67□□□□□ -1.02
ECM1-201ENST00000346569 PARP11Q9NR21 331 aa8.67□□□□□ -1.02
ECM1-201ENST00000346569 KLK9Q9UKQ9 250 aa8.67□□□□□ -1.02
ECM1-201ENST00000346569 MOB4Q9Y3A3 225 aa8.67□□□□□ -1.02
ECM1-201ENST00000346569 IGKV1OR2-108A0A075B7D4 117 aa8.66□□□□□ -1.02
ECM1-201ENST00000346569 LINC01548A6NM66 108 aa8.66□□□□□ -1.02
ECM1-201ENST00000346569 NPIPB5A8MRT5 1133 aa8.66□□□□□ -1.02
ECM1-201ENST00000346569 H3BUX3 64 aa8.66□□□□□ -1.02
ECM1-201ENST00000346569 SMAD7O15105 426 aaKnown RBP8.66□□□□□ -1.02
ECM1-201ENST00000346569 ATP6V1G1O75348 118 aa8.66□□□□□ -1.02
ECM1-201ENST00000346569 APELAP0DMC3 54 aa8.66□□□□□ -1.02
ECM1-201ENST00000346569 FHITP49789 147 aa8.66□□□□□ -1.02
ECM1-201ENST00000346569 TEPPQ6URK8 271 aa8.66□□□□□ -1.02
ECM1-201ENST00000346569 TMEM219Q86XT9 240 aa8.66□□□□□ -1.02
ECM1-201ENST00000346569 OR2T6Q8NHC8 308 aa8.66□□□□□ -1.02
ECM1-201ENST00000346569 SGMS2Q8NHU3 365 aa8.66□□□□□ -1.02
ECM1-201ENST00000346569 MGST2Q99735 147 aa8.66□□□□□ -1.02
ECM1-201ENST00000346569 VSIRQ9H7M9 311 aa8.66□□□□□ -1.02
ECM1-201ENST00000346569 RPRMQ9NS64 109 aa8.66□□□□□ -1.02
ECM1-201ENST00000346569 PITPNC1Q9UKF7 332 aa8.66□□□□□ -1.02
ECM1-201ENST00000346569 NAV3Q8IVL0 2385 aa8.66□□□□□ -1.02
ECM1-201ENST00000346569 SETD2Q9BYW2 2564 aaPredicted RBP8.65□□□□□ -1.02
ECM1-201ENST00000346569 MDFIC2A0A1B0GVS7 189 aa8.65□□□□□ -1.02
ECM1-201ENST00000346569 SMCO3A2RU48 225 aa8.65□□□□□ -1.02
ECM1-201ENST00000346569 IER3P46695 156 aa8.65□□□□□ -1.02
ECM1-201ENST00000346569 CRIP2P52943 208 aaPredicted RBP8.65□□□□□ -1.02
ECM1-201ENST00000346569 PXDC1Q5TGL8 231 aa8.65□□□□□ -1.02
ECM1-201ENST00000346569 Q6YL49 198 aa8.65□□□□□ -1.02
ECM1-201ENST00000346569 C16orf82Q7Z2V1 217 aa8.65□□□□□ -1.02
ECM1-201ENST00000346569 EIF4E3Q8N5X7 224 aaKnown RBP8.65□□□□□ -1.02
ECM1-201ENST00000346569 LFNGQ8NES3 379 aa8.65□□□□□ -1.02
ECM1-201ENST00000346569 OR1L6Q8NGR2 347 aa8.65□□□□□ -1.02
ECM1-201ENST00000346569 ABHD5Q8WTS1 349 aa8.65□□□□□ -1.02
ECM1-201ENST00000346569 C22orf15Q8WYQ4 148 aa8.65□□□□□ -1.02
ECM1-201ENST00000346569 ZNF48Q96MX3 618 aaPredicted RBP8.65□□□□□ -1.02
ECM1-201ENST00000346569 FANCD2OSQ96PS1 177 aa8.65□□□□□ -1.02
ECM1-201ENST00000346569 SLC45A2Q9UMX9 530 aa8.65□□□□□ -1.02
ECM1-201ENST00000346569 NIPBLQ6KC79 2804 aaeCLIP8.65□□□□□ -1.03
ECM1-201ENST00000346569 C17orf112F2Z3M2 114 aa8.64□□□□□ -1.03
ECM1-201ENST00000346569 I3L2K1 104 aa8.64□□□□□ -1.03
ECM1-201ENST00000346569 CORTO00230 105 aa8.64□□□□□ -1.03
ECM1-201ENST00000346569 AGPAT2O15120 278 aa8.64□□□□□ -1.03
ECM1-201ENST00000346569 CD5LO43866 347 aa8.64□□□□□ -1.03
ECM1-201ENST00000346569 SOX15O60248 233 aa8.64□□□□□ -1.03
ECM1-201ENST00000346569 LINC00869P0C866 280 aa8.64□□□□□ -1.03
ECM1-201ENST00000346569 OPRK1P41145 380 aa8.64□□□□□ -1.03
ECM1-201ENST00000346569 RPL29P47914 159 aaKnown RBP8.64□□□□□ -1.03
ECM1-201ENST00000346569 CAMLGP49069 296 aa8.64□□□□□ -1.03
ECM1-201ENST00000346569 LY6EQ16553 131 aa8.64□□□□□ -1.03
ECM1-201ENST00000346569 AKIRIN2Q53H80 203 aa8.64□□□□□ -1.03
ECM1-201ENST00000346569 AKR1C8PQ5T2L2 129 aa8.64□□□□□ -1.03
ECM1-201ENST00000346569 ETFRF1Q6IPR1 90 aa8.64□□□□□ -1.03
ECM1-201ENST00000346569 ACSM6Q6P461 480 aa8.64□□□□□ -1.03
ECM1-201ENST00000346569 DPPA3Q6W0C5 159 aa8.64□□□□□ -1.03
ECM1-201ENST00000346569 Q6ZRG5 221 aa8.64□□□□□ -1.03
ECM1-201ENST00000346569 SLC16A13Q7RTY0 426 aa8.64□□□□□ -1.03
ECM1-201ENST00000346569 RPP25LQ8N5L8 163 aaKnown RBP8.64□□□□□ -1.03
ECM1-201ENST00000346569 ZNF709Q8N972 641 aa8.64□□□□□ -1.03
ECM1-201ENST00000346569 TMEM116Q8NCL8 245 aa8.64□□□□□ -1.03
ECM1-201ENST00000346569 MBD3L1Q8WWY6 194 aa8.64□□□□□ -1.03
ECM1-201ENST00000346569 MARC2Q969Z3 335 aa8.64□□□□□ -1.03
ECM1-201ENST00000346569 TMEM68Q96MH6 324 aa8.64□□□□□ -1.03
ECM1-201ENST00000346569 GGTLC1Q9BX51 225 aa8.64□□□□□ -1.03
ECM1-201ENST00000346569 MRPL36Q9P0J6 103 aaKnown RBP8.64□□□□□ -1.03
ECM1-201ENST00000346569 IGLV11-55A0A075B6I3 123 aa8.63□□□□□ -1.03
ECM1-201ENST00000346569 IGKV1D-37A0A075B6S9 117 aa8.63□□□□□ -1.03
ECM1-201ENST00000346569 MFSD2BA6NFX1 497 aa8.63□□□□□ -1.03
ECM1-201ENST00000346569 SH2D7A6NKC9 451 aaPredicted RBP8.63□□□□□ -1.03
ECM1-201ENST00000346569 K7EIM0 57 aa8.63□□□□□ -1.03
ECM1-201ENST00000346569 M0QZK8 103 aa8.63□□□□□ -1.03
ECM1-201ENST00000346569 YIF1AO95070 293 aa8.63□□□□□ -1.03
ECM1-201ENST00000346569 MT-CO2P00403 227 aa8.63□□□□□ -1.03
ECM1-201ENST00000346569 IGHV4-59P01825 116 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms