RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 SCRT1Q9BWW7 348 aa7.45□□□□□ -1.22
ATG4A-202ENST00000345734 HINT2Q9BX68 163 aa7.45□□□□□ -1.22
ATG4A-202ENST00000345734 HIPK2Q9H2X6 1198 aa7.45□□□□□ -1.22
ATG4A-202ENST00000345734 PATZ1Q9HBE1 687 aaKnown RBP7.45□□□□□ -1.22
ATG4A-202ENST00000345734 KPTNQ9Y664 436 aa7.45□□□□□ -1.22
ATG4A-202ENST00000345734 ZFHX3Q15911 3703 aa7.45□□□□□ -1.22
ATG4A-202ENST00000345734 IGHV3-72A0A0B4J1Y9 119 aa7.45□□□□□ -1.22
ATG4A-202ENST00000345734 IGLV1-47P01700 117 aa7.45□□□□□ -1.22
ATG4A-202ENST00000345734 AMY1AP04745 511 aa7.45□□□□□ -1.22
ATG4A-202ENST00000345734 ELLP55199 621 aaPredicted RBP7.45□□□□□ -1.22
ATG4A-202ENST00000345734 ATP6V1FQ16864 119 aa7.45□□□□□ -1.22
ATG4A-202ENST00000345734 Q8N7P7 452 aa7.45□□□□□ -1.22
ATG4A-202ENST00000345734 OSR1Q8TAX0 266 aaPredicted RBP7.45□□□□□ -1.22
ATG4A-202ENST00000345734 LHX4Q969G2 390 aa7.45□□□□□ -1.22
ATG4A-202ENST00000345734 PINX1Q96BK5 328 aaKnown RBP7.45□□□□□ -1.22
ATG4A-202ENST00000345734 FLYWCH2Q96CP2 140 aaKnown RBP7.45□□□□□ -1.22
ATG4A-202ENST00000345734 NUDT11Q96G61 164 aa7.45□□□□□ -1.22
ATG4A-202ENST00000345734 CLCC1Q96S66 551 aa7.45□□□□□ -1.22
ATG4A-202ENST00000345734 SNHG12Q9BXW3 62 aa7.45□□□□□ -1.22
ATG4A-202ENST00000345734 PARD6GQ9BYG4 376 aaPredicted RBP7.45□□□□□ -1.22
ATG4A-202ENST00000345734 PRO1933Q9H354 126 aa7.45□□□□□ -1.22
ATG4A-202ENST00000345734 RPRMQ9NS64 109 aa7.45□□□□□ -1.22
ATG4A-202ENST00000345734 TEX50A0A1B0GTY4 177 aa7.44□□□□□ -1.22
ATG4A-202ENST00000345734 A0A1W2PPH5 198 aa7.44□□□□□ -1.22
ATG4A-202ENST00000345734 FAM157AC9JC47 383 aa7.44□□□□□ -1.22
ATG4A-202ENST00000345734 PPP1R2P9O14990 202 aa7.44□□□□□ -1.22
ATG4A-202ENST00000345734 KBTBD11O94819 623 aa7.44□□□□□ -1.22
ATG4A-202ENST00000345734 LIPFP07098 398 aa7.44□□□□□ -1.22
ATG4A-202ENST00000345734 GPR6P46095 362 aaPredicted RBP7.44□□□□□ -1.22
ATG4A-202ENST00000345734 DVL1P1P54792 670 aaPredicted RBP7.44□□□□□ -1.22
ATG4A-202ENST00000345734 ARF6P62330 175 aa7.44□□□□□ -1.22
ATG4A-202ENST00000345734 DLK1P80370 383 aa7.44□□□□□ -1.22
ATG4A-202ENST00000345734 KIAA0141Q14154 515 aaPredicted RBP7.44□□□□□ -1.22
ATG4A-202ENST00000345734 GUK1Q16774 197 aa7.44□□□□□ -1.22
ATG4A-202ENST00000345734 HLA-DRB5Q30154 266 aa7.44□□□□□ -1.22
ATG4A-202ENST00000345734 PDPNQ86YL7 162 aa7.44□□□□□ -1.22
ATG4A-202ENST00000345734 ATG101Q9BSB4 218 aa7.44□□□□□ -1.22
ATG4A-202ENST00000345734 PSMG3Q9BT73 122 aaPredicted RBP7.44□□□□□ -1.22
ATG4A-202ENST00000345734 SSBP3Q9BWW4 388 aaPredicted RBP7.44□□□□□ -1.22
ATG4A-202ENST00000345734 CLEC7AQ9BXN2 247 aa7.44□□□□□ -1.22
ATG4A-202ENST00000345734 BET1LQ9NYM9 111 aa7.44□□□□□ -1.22
ATG4A-202ENST00000345734 PRNDQ9UKY0 176 aa7.44□□□□□ -1.22
ATG4A-202ENST00000345734 RPH3ALQ9UNE2 315 aa7.44□□□□□ -1.22
ATG4A-202ENST00000345734 WASHC3Q9Y3C0 194 aa7.44□□□□□ -1.22
ATG4A-202ENST00000345734 LOC105371242A0A075B767 164 aa7.43□□□□□ -1.22
ATG4A-202ENST00000345734 TMEM238C9JI98 176 aa7.43□□□□□ -1.22
ATG4A-202ENST00000345734 BUB1B-PAK6H3BSN5 160 aa7.43□□□□□ -1.22
ATG4A-202ENST00000345734 IGLV2-23P01705 113 aa7.43□□□□□ -1.22
ATG4A-202ENST00000345734 SNRPCP09234 159 aaKnown RBP7.43□□□□□ -1.22
ATG4A-202ENST00000345734 SFTA3P0C7M3 94 aa7.43□□□□□ -1.22
ATG4A-202ENST00000345734 IL3RAP26951 378 aa7.43□□□□□ -1.22
ATG4A-202ENST00000345734 PRRX1P54821 245 aa7.43□□□□□ -1.22
ATG4A-202ENST00000345734 ZNF726P1Q15940 193 aa7.43□□□□□ -1.22
ATG4A-202ENST00000345734 VWC2Q2TAL6 325 aa7.43□□□□□ -1.22
ATG4A-202ENST00000345734 SP5Q6BEB4 398 aaPredicted RBP7.43□□□□□ -1.22
ATG4A-202ENST00000345734 ACSM6Q6P461 480 aa7.43□□□□□ -1.22
ATG4A-202ENST00000345734 SSX7Q7RTT5 188 aa7.43□□□□□ -1.22
ATG4A-202ENST00000345734 PNKDQ8N490 385 aa7.43□□□□□ -1.22
ATG4A-202ENST00000345734 OR4P4Q8NGL7 312 aa7.43□□□□□ -1.22
ATG4A-202ENST00000345734 OR4C13Q8NGP0 309 aa7.43□□□□□ -1.22
ATG4A-202ENST00000345734 RNASEH2CQ8TDP1 164 aaKnown RBP7.43□□□□□ -1.22
ATG4A-202ENST00000345734 PUS1Q9Y606 427 aaKnown RBP eCLIP7.43□□□□□ -1.22
ATG4A-202ENST00000345734 FAM208BQ5VWN6 2430 aa7.43□□□□□ -1.22
ATG4A-202ENST00000345734 CENPEQ02224 2701 aa7.43□□□□□ -1.22
ATG4A-202ENST00000345734 PRSS46E5RG02 174 aa7.43□□□□□ -1.22
ATG4A-202ENST00000345734 ENSAO43768 121 aaKnown RBP7.43□□□□□ -1.22
ATG4A-202ENST00000345734 CA2P00918 260 aa7.43□□□□□ -1.22
ATG4A-202ENST00000345734 RBP4P02753 201 aa7.43□□□□□ -1.22
ATG4A-202ENST00000345734 EFNA4P52798 201 aa7.43□□□□□ -1.22
ATG4A-202ENST00000345734 PRCDQ00LT1 54 aa7.43□□□□□ -1.22
ATG4A-202ENST00000345734 JOSD1Q15040 202 aaPredicted RBP7.43□□□□□ -1.22
ATG4A-202ENST00000345734 LDLRAD2Q5SZI1 272 aa7.43□□□□□ -1.22
ATG4A-202ENST00000345734 LEMD1Q68G75 181 aa7.43□□□□□ -1.22
ATG4A-202ENST00000345734 COMMD1Q8N668 190 aa7.43□□□□□ -1.22
ATG4A-202ENST00000345734 RARRES2Q99969 163 aa7.43□□□□□ -1.22
ATG4A-202ENST00000345734 NPCDR1Q9BY65 106 aa7.43□□□□□ -1.22
ATG4A-202ENST00000345734 ACTR3CQ9C0K3 210 aaPredicted RBP7.43□□□□□ -1.22
ATG4A-202ENST00000345734 EIF5A2Q9GZV4 153 aaKnown RBP7.43□□□□□ -1.22
ATG4A-202ENST00000345734 ENY2Q9NPA8 101 aa7.43□□□□□ -1.22
ATG4A-202ENST00000345734 UBR5O95071 2799 aaPredicted RBP7.43□□□□□ -1.22
ATG4A-202ENST00000345734 LRRK2Q5S007 2527 aa7.43□□□□□ -1.22
ATG4A-202ENST00000345734 SMCO3A2RU48 225 aa7.42□□□□□ -1.22
ATG4A-202ENST00000345734 E7EUB6 86 aa7.42□□□□□ -1.22
ATG4A-202ENST00000345734 YIF1AO95070 293 aa7.42□□□□□ -1.22
ATG4A-202ENST00000345734 IGKV1D-33P01593 117 aa7.42□□□□□ -1.22
ATG4A-202ENST00000345734 IGKV1-33P01594 117 aa7.42□□□□□ -1.22
ATG4A-202ENST00000345734 MDKP21741 143 aaPredicted RBP7.42□□□□□ -1.22
ATG4A-202ENST00000345734 NPY1RP25929 384 aa7.42□□□□□ -1.22
ATG4A-202ENST00000345734 ZFP36P26651 326 aaKnown RBP7.42□□□□□ -1.22
ATG4A-202ENST00000345734 SERF2P84101 59 aa7.42□□□□□ -1.22
ATG4A-202ENST00000345734 KLRD1Q13241 179 aa7.42□□□□□ -1.22
ATG4A-202ENST00000345734 RHEBQ15382 184 aa7.42□□□□□ -1.22
ATG4A-202ENST00000345734 MLANAQ16655 118 aa7.42□□□□□ -1.22
ATG4A-202ENST00000345734 TMEM41BQ5BJD5 291 aa7.42□□□□□ -1.22
ATG4A-202ENST00000345734 DPPA3Q6W0C5 159 aa7.42□□□□□ -1.22
ATG4A-202ENST00000345734 CENPVQ7Z7K6 275 aaPredicted RBP7.42□□□□□ -1.22
ATG4A-202ENST00000345734 OR10W1Q8NGF6 305 aa7.42□□□□□ -1.22
ATG4A-202ENST00000345734 IGFBPL1Q8WX77 278 aa7.42□□□□□ -1.22
ATG4A-202ENST00000345734 PLEKHA3Q9HB20 300 aa7.42□□□□□ -1.22
ATG4A-202ENST00000345734 ZNF257Q9Y2Q1 563 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms