RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 ZNF497Q6ZNH5 498 aa14.62□□□□□ -0.07
SPAST-202ENST00000345662 TEX29Q8N6K0 151 aa14.62□□□□□ -0.07
SPAST-202ENST00000345662 ANAPC13Q9BS18 74 aa14.62□□□□□ -0.07
SPAST-202ENST00000345662 TIAF1O95411 115 aa14.62□□□□□ -0.07
SPAST-202ENST00000345662 LEPP41159 167 aa14.62□□□□□ -0.07
SPAST-202ENST00000345662 CACNG7P62955 275 aa14.62□□□□□ -0.07
SPAST-202ENST00000345662 FAM90A2PQ658T7 463 aa14.62□□□□□ -0.07
SPAST-202ENST00000345662 TP53BP1Q12888 1972 aaPredicted RBP14.62□□□□□ -0.07
SPAST-202ENST00000345662 NPIPB11E5RHQ5 1161 aa14.62□□□□□ -0.07
SPAST-202ENST00000345662 RFPL3SP0C7P2 107 aa14.62□□□□□ -0.07
SPAST-202ENST00000345662 DCTN5Q9BTE1 182 aa14.62□□□□□ -0.07
SPAST-202ENST00000345662 OTORQ9NRC9 128 aa14.62□□□□□ -0.07
SPAST-202ENST00000345662 PDCD11Q14690 1871 aaKnown RBP14.62□□□□□ -0.07
SPAST-202ENST00000345662 PPP1R17O96001 155 aa14.62□□□□□ -0.07
SPAST-202ENST00000345662 HGFACQ04756 655 aa14.62□□□□□ -0.07
SPAST-202ENST00000345662 OR9G4Q8NGQ1 327 aa14.62□□□□□ -0.07
SPAST-202ENST00000345662 MTCL1Q9Y4B5 1905 aaKnown RBP14.62□□□□□ -0.07
SPAST-202ENST00000345662 IGHV1-69-2A0A0G2JMI3 117 aa14.61□□□□□ -0.07
SPAST-202ENST00000345662 CDCP2Q5VXM1 449 aa14.61□□□□□ -0.07
SPAST-202ENST00000345662 IGKV1-12A0A0C4DH73 117 aa14.61□□□□□ -0.07
SPAST-202ENST00000345662 NDUFA3O95167 84 aa14.61□□□□□ -0.07
SPAST-202ENST00000345662 IGKV1D-12P01611 117 aa14.61□□□□□ -0.07
SPAST-202ENST00000345662 SPEM2Q0P670 501 aa14.61□□□□□ -0.07
SPAST-202ENST00000345662 PMS2CLQ68D20 193 aa14.61□□□□□ -0.07
SPAST-202ENST00000345662 SIPA1L1O43166 1804 aa14.61□□□□□ -0.07
SPAST-202ENST00000345662 AHCTF1Q8WYP5 2266 aa14.61□□□□□ -0.07
SPAST-202ENST00000345662 TRAV8-2A0A0B4J237 113 aa14.61□□□□□ -0.07
SPAST-202ENST00000345662 C10orf91Q5T1B1 145 aa14.61□□□□□ -0.07
SPAST-202ENST00000345662 ZNF479Q96JC4 524 aa14.61□□□□□ -0.07
SPAST-202ENST00000345662 SNHG12Q9BXW3 62 aa14.61□□□□□ -0.07
SPAST-202ENST00000345662 CRIM1Q9NZV1 1036 aa14.61□□□□□ -0.07
SPAST-202ENST00000345662 KBTBD11-OT1A0A1B0GTJ5 212 aa14.61□□□□□ -0.07
SPAST-202ENST00000345662 IGHV2-5P01817 119 aa14.61□□□□□ -0.07
SPAST-202ENST00000345662 MPV17L2Q567V2 206 aa14.61□□□□□ -0.07
SPAST-202ENST00000345662 TPTE2P1Q5T6R2 138 aa14.61□□□□□ -0.07
SPAST-202ENST00000345662 TDRD6O60522 2096 aaKnown RBP14.6□□□□□ -0.07
SPAST-202ENST00000345662 TREML4Q6UXN2 200 aa14.6□□□□□ -0.07
SPAST-202ENST00000345662 FREM3P0C091 2139 aa14.6□□□□□ -0.07
SPAST-202ENST00000345662 QRFPP83859 136 aa14.6□□□□□ -0.07
SPAST-202ENST00000345662 RASL11AQ6T310 242 aa14.6□□□□□ -0.07
SPAST-202ENST00000345662 LOXL4Q96JB6 756 aa14.6□□□□□ -0.07
SPAST-202ENST00000345662 LTBP4Q8N2S1 1624 aa14.6□□□□□ -0.07
SPAST-202ENST00000345662 CEP290O15078 2479 aa14.6□□□□□ -0.07
SPAST-202ENST00000345662 TM4SF5O14894 197 aa14.6□□□□□ -0.07
SPAST-202ENST00000345662 CD33P20138 364 aa14.6□□□□□ -0.07
SPAST-202ENST00000345662 FLVCR1-AS1Q8TAF5 88 aa14.6□□□□□ -0.07
SPAST-202ENST00000345662 C20orf144Q9BQM9 153 aa14.6□□□□□ -0.07
SPAST-202ENST00000345662 CLEC7AQ9BXN2 247 aa14.6□□□□□ -0.07
SPAST-202ENST00000345662 FAM90A9PA6NNJ1 464 aa14.6□□□□□ -0.07
SPAST-202ENST00000345662 TMEM262E9PQX1 116 aa14.6□□□□□ -0.07
SPAST-202ENST00000345662 UPK2O00526 184 aa14.59□□□□□ -0.07
SPAST-202ENST00000345662 DPM2O94777 84 aa14.59□□□□□ -0.07
SPAST-202ENST00000345662 TGFAP01135 160 aa14.59□□□□□ -0.07
SPAST-202ENST00000345662 PYYP10082 97 aa14.59□□□□□ -0.07
SPAST-202ENST00000345662 ZNF585BQ52M93 769 aa14.59□□□□□ -0.07
SPAST-202ENST00000345662 GEMIN7Q9H840 131 aaKnown RBP14.59□□□□□ -0.07
SPAST-202ENST00000345662 SPSB3Q6PJ21 355 aa14.59□□□□□ -0.07
SPAST-202ENST00000345662 DEFB123Q8N688 67 aa14.59□□□□□ -0.07
SPAST-202ENST00000345662 FGF11Q92914 225 aa14.59□□□□□ -0.07
SPAST-202ENST00000345662 COQ2Q96H96 371 aa14.59□□□□□ -0.07
SPAST-202ENST00000345662 POLR3KQ9Y2Y1 108 aaPredicted RBP14.59□□□□□ -0.07
SPAST-202ENST00000345662 A0A0G2JLM5 398 aa14.59□□□□□ -0.07
SPAST-202ENST00000345662 LCN12Q6JVE5 192 aa14.59□□□□□ -0.07
SPAST-202ENST00000345662 Q6ZT83 130 aa14.59□□□□□ -0.07
SPAST-202ENST00000345662 MAFAQ8NHW3 353 aaPredicted RBP14.59□□□□□ -0.07
SPAST-202ENST00000345662 GGTLC1Q9BX51 225 aa14.59□□□□□ -0.07
SPAST-202ENST00000345662 GP6Q9HCN6 339 aa14.59□□□□□ -0.07
SPAST-202ENST00000345662 YPEL1O60688 119 aa14.59□□□□□ -0.07
SPAST-202ENST00000345662 DNAL4O96015 105 aa14.59□□□□□ -0.07
SPAST-202ENST00000345662 MEIG1Q5JSS6 88 aa14.59□□□□□ -0.07
SPAST-202ENST00000345662 YPEL2Q96QA6 119 aa14.59□□□□□ -0.07
SPAST-202ENST00000345662 ZNF71Q9NQZ8 489 aaPredicted RBP14.59□□□□□ -0.07
SPAST-202ENST00000345662 RTTNQ86VV8 2226 aa14.58□□□□□ -0.07
SPAST-202ENST00000345662 NPPCP23582 126 aa14.58□□□□□ -0.07
SPAST-202ENST00000345662 GAGE13Q4V321 117 aa14.58□□□□□ -0.07
SPAST-202ENST00000345662 STPG1Q5TH74 334 aa14.58□□□□□ -0.07
SPAST-202ENST00000345662 FAM74A4Q5TZK3 123 aa14.58□□□□□ -0.07
SPAST-202ENST00000345662 TMEM14EPQ6UXP3 125 aa14.58□□□□□ -0.07
SPAST-202ENST00000345662 SHISA5Q8N114 240 aa14.58□□□□□ -0.07
SPAST-202ENST00000345662 PILRBQ9UKJ0 227 aa14.58□□□□□ -0.07
SPAST-202ENST00000345662 PPIAL4CA0A0B4J2A2 164 aa14.58□□□□□ -0.08
SPAST-202ENST00000345662 A0A1W2PR77 199 aa14.58□□□□□ -0.08
SPAST-202ENST00000345662 OR9G9P0C7N8 305 aa14.58□□□□□ -0.08
SPAST-202ENST00000345662 PPIAL4GP0DN37 164 aa14.58□□□□□ -0.08
SPAST-202ENST00000345662 PSG7Q13046 419 aa14.58□□□□□ -0.08
SPAST-202ENST00000345662 ZNF56Q15929 161 aa14.58□□□□□ -0.08
SPAST-202ENST00000345662 LY96Q9Y6Y9 160 aa14.58□□□□□ -0.08
SPAST-202ENST00000345662 ERVK11-1P61568 191 aa14.58□□□□□ -0.08
SPAST-202ENST00000345662 IFI27L1Q96BM0 104 aa14.58□□□□□ -0.08
SPAST-202ENST00000345662 E9PQ18 207 aa14.58□□□□□ -0.08
SPAST-202ENST00000345662 M0R381 172 aa14.58□□□□□ -0.08
SPAST-202ENST00000345662 HOXA3O43365 443 aaPredicted RBP14.57□□□□□ -0.08
SPAST-202ENST00000345662 OR5AN1Q8NGI8 311 aa14.57□□□□□ -0.08
SPAST-202ENST00000345662 TIMP4Q99727 224 aa14.57□□□□□ -0.08
SPAST-202ENST00000345662 MRPL27Q9P0M9 148 aaKnown RBP14.57□□□□□ -0.08
SPAST-202ENST00000345662 COX11Q9Y6N1 276 aa14.57□□□□□ -0.08
SPAST-202ENST00000345662 NXT2Q9NPJ8 142 aaKnown RBP14.57□□□□□ -0.08
SPAST-202ENST00000345662 SAA1P0DJI8 122 aaPredicted RBP14.57□□□□□ -0.08
SPAST-202ENST00000345662 CRYGSP22914 178 aa14.57□□□□□ -0.08
SPAST-202ENST00000345662 CD69Q07108 199 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms