RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 KLF14Q8TD94 323 aaPredicted RBP10.15□□□□□ -0.78
COL12A1-202ENST00000345356 MRPL27Q9P0M9 148 aaKnown RBP10.15□□□□□ -0.78
COL12A1-202ENST00000345356 LILRA1O75019 489 aa10.15□□□□□ -0.78
COL12A1-202ENST00000345356 IGLC2P0DOY2 106 aa10.15□□□□□ -0.78
COL12A1-202ENST00000345356 IGLC3P0DOY3 106 aa10.15□□□□□ -0.78
COL12A1-202ENST00000345356 HES7Q9BYE0 225 aa10.15□□□□□ -0.78
COL12A1-202ENST00000345356 EPDR1Q9UM22 224 aa10.15□□□□□ -0.78
COL12A1-202ENST00000345356 PRTN3P24158 256 aa10.15□□□□□ -0.79
COL12A1-202ENST00000345356 CLEC7AQ9BXN2 247 aa10.15□□□□□ -0.79
COL12A1-202ENST00000345356 FAM186AA6NE01 2351 aa10.14□□□□□ -0.79
COL12A1-202ENST00000345356 A0A1W2PS18 150 aa10.14□□□□□ -0.79
COL12A1-202ENST00000345356 FAM231BA6NCW3 169 aa10.14□□□□□ -0.79
COL12A1-202ENST00000345356 NMSQ5H8A3 153 aa10.14□□□□□ -0.79
COL12A1-202ENST00000345356 CDCP2Q5VXM1 449 aa10.14□□□□□ -0.79
COL12A1-202ENST00000345356 PSG3Q16557 428 aa10.14□□□□□ -0.79
COL12A1-202ENST00000345356 F2RL2O00254 374 aa10.14□□□□□ -0.79
COL12A1-202ENST00000345356 DNM1P46Q6ZS02 220 aa10.14□□□□□ -0.79
COL12A1-202ENST00000345356 OR13A1Q8NGR1 328 aa10.14□□□□□ -0.79
COL12A1-202ENST00000345356 RAB1CQ92928 201 aa10.14□□□□□ -0.79
COL12A1-202ENST00000345356 SIGLEC12Q96PQ1 595 aa10.14□□□□□ -0.79
COL12A1-202ENST00000345356 METTL26Q96S19 204 aa10.14□□□□□ -0.79
COL12A1-202ENST00000345356 GFRALQ6UXV0 394 aa10.14□□□□□ -0.79
COL12A1-202ENST00000345356 MRAP2Q96G30 205 aa10.14□□□□□ -0.79
COL12A1-202ENST00000345356 Q6ZWC4 215 aa10.13□□□□□ -0.79
COL12A1-202ENST00000345356 MCRIP2Q9BUT9 160 aaKnown RBP10.13□□□□□ -0.79
COL12A1-202ENST00000345356 ID1P41134 155 aa10.13□□□□□ -0.79
COL12A1-202ENST00000345356 SLC25A2Q9BXI2 301 aa10.13□□□□□ -0.79
COL12A1-202ENST00000345356 IGHV1-45A0A0A0MS14 117 aa10.13□□□□□ -0.79
COL12A1-202ENST00000345356 FAM74A4Q5TZK3 123 aa10.13□□□□□ -0.79
COL12A1-202ENST00000345356 RASL11AQ6T310 242 aa10.13□□□□□ -0.79
COL12A1-202ENST00000345356 CACNG8Q8WXS5 425 aa10.13□□□□□ -0.79
COL12A1-202ENST00000345356 RAB1BQ9H0U4 201 aa10.13□□□□□ -0.79
COL12A1-202ENST00000345356 GEMIN7Q9H840 131 aaKnown RBP10.13□□□□□ -0.79
COL12A1-202ENST00000345356 IGKV3D-15A0A087WSY6 115 aa10.13□□□□□ -0.79
COL12A1-202ENST00000345356 M0R381 172 aa10.13□□□□□ -0.79
COL12A1-202ENST00000345356 IGKV3-15P01624 115 aa10.13□□□□□ -0.79
COL12A1-202ENST00000345356 Q0VG73 95 aa10.13□□□□□ -0.79
COL12A1-202ENST00000345356 SPATA31B1PQ5VZV4 182 aa10.13□□□□□ -0.79
COL12A1-202ENST00000345356 OR5AN1Q8NGI8 311 aa10.13□□□□□ -0.79
COL12A1-202ENST00000345356 FGF11Q92914 225 aa10.13□□□□□ -0.79
COL12A1-202ENST00000345356 TREML4Q6UXN2 200 aa10.13□□□□□ -0.79
COL12A1-202ENST00000345356 GTSCR1Q86UQ5 136 aa10.13□□□□□ -0.79
COL12A1-202ENST00000345356 NUP37Q8NFH4 326 aa10.13□□□□□ -0.79
COL12A1-202ENST00000345356 ZNF837Q96EG3 531 aaPredicted RBP10.13□□□□□ -0.79
COL12A1-202ENST00000345356 ZNRF1Q8ND25 227 aa10.12□□□□□ -0.79
COL12A1-202ENST00000345356 TP53BP1Q12888 1972 aaPredicted RBP10.12□□□□□ -0.79
COL12A1-202ENST00000345356 CDKN1BP46527 198 aa10.12□□□□□ -0.79
COL12A1-202ENST00000345356 PAPPA-AS1Q5QFB9 102 aa10.12□□□□□ -0.79
COL12A1-202ENST00000345356 KIR3DL3Q8N743 410 aa10.12□□□□□ -0.79
COL12A1-202ENST00000345356 LSM4Q9Y4Z0 139 aaKnown RBP10.12□□□□□ -0.79
COL12A1-202ENST00000345356 ZNF815PA8K554 130 aa10.12□□□□□ -0.79
COL12A1-202ENST00000345356 CITED1Q99966 193 aa10.12□□□□□ -0.79
COL12A1-202ENST00000345356 DCTN5Q9BTE1 182 aa10.12□□□□□ -0.79
COL12A1-202ENST00000345356 GGTLC1Q9BX51 225 aa10.12□□□□□ -0.79
COL12A1-202ENST00000345356 STPG4Q8N801 248 aa10.12□□□□□ -0.79
COL12A1-202ENST00000345356 TRAV8-1A0A0A6YYK1 113 aa10.12□□□□□ -0.79
COL12A1-202ENST00000345356 TMEM249Q2WGJ8 235 aa10.12□□□□□ -0.79
COL12A1-202ENST00000345356 C1QTNF5Q9BXJ0 243 aa10.12□□□□□ -0.79
COL12A1-202ENST00000345356 OTORQ9NRC9 128 aa10.12□□□□□ -0.79
COL12A1-202ENST00000345356 ZNF56Q15929 161 aa10.11□□□□□ -0.79
COL12A1-202ENST00000345356 RNFT1Q5M7Z0 435 aa10.11□□□□□ -0.79
COL12A1-202ENST00000345356 TSSC4Q9Y5U2 329 aaPredicted RBP10.11□□□□□ -0.79
COL12A1-202ENST00000345356 PPP1R17O96001 155 aa10.11□□□□□ -0.79
COL12A1-202ENST00000345356 ACP7Q6ZNF0 438 aa10.11□□□□□ -0.79
COL12A1-202ENST00000345356 REPIN1Q9BWE0 567 aaKnown RBP10.11□□□□□ -0.79
COL12A1-202ENST00000345356 QRFPP83859 136 aa10.11□□□□□ -0.79
COL12A1-202ENST00000345356 JMJD8Q96S16 334 aa10.11□□□□□ -0.79
COL12A1-202ENST00000345356 SPAG8Q99932 426 aaPredicted RBP10.11□□□□□ -0.79
COL12A1-202ENST00000345356 OR9G9P0C7N8 305 aa10.11□□□□□ -0.79
COL12A1-202ENST00000345356 RAB9AP51151 201 aa10.11□□□□□ -0.79
COL12A1-202ENST00000345356 TMEM155Q4W5P6 130 aa10.11□□□□□ -0.79
COL12A1-202ENST00000345356 UNQ6494/PRO21346Q6UXR6 183 aa10.11□□□□□ -0.79
COL12A1-202ENST00000345356 RNF144BQ7Z419 303 aa10.11□□□□□ -0.79
COL12A1-202ENST00000345356 OSR1Q8TAX0 266 aaPredicted RBP10.11□□□□□ -0.79
COL12A1-202ENST00000345356 ARRDC1-AS1Q9H2J1 176 aa10.11□□□□□ -0.79
COL12A1-202ENST00000345356 NXT2Q9NPJ8 142 aaKnown RBP10.11□□□□□ -0.79
COL12A1-202ENST00000345356 K7EP13 123 aa10.1□□□□□ -0.79
COL12A1-202ENST00000345356 SS18L1O75177 396 aaPredicted RBP10.1□□□□□ -0.79
COL12A1-202ENST00000345356 CCDC144NLQ6NUI1 221 aa10.1□□□□□ -0.79
COL12A1-202ENST00000345356 NUP35Q8NFH5 326 aa10.1□□□□□ -0.79
COL12A1-202ENST00000345356 IGHV3-35A0A0C4DH35 117 aa10.1□□□□□ -0.79
COL12A1-202ENST00000345356 IGKV1-12A0A0C4DH73 117 aa10.1□□□□□ -0.79
COL12A1-202ENST00000345356 IFNL4K9M1U5 179 aa10.1□□□□□ -0.79
COL12A1-202ENST00000345356 FOXH1O75593 365 aa10.1□□□□□ -0.79
COL12A1-202ENST00000345356 IGKV1D-12P01611 117 aa10.1□□□□□ -0.79
COL12A1-202ENST00000345356 LINC00271P0C7V0 271 aa10.1□□□□□ -0.79
COL12A1-202ENST00000345356 SCARF2Q96GP6 870 aaPredicted RBP10.1□□□□□ -0.79
COL12A1-202ENST00000345356 LY96Q9Y6Y9 160 aa10.1□□□□□ -0.79
COL12A1-202ENST00000345356 C15orf61A6NNL5 157 aa10.1□□□□□ -0.79
COL12A1-202ENST00000345356 TMEM14EPQ6UXP3 125 aa10.1□□□□□ -0.79
COL12A1-202ENST00000345356 SEPSECSQ9HD40 501 aaKnown RBP10.1□□□□□ -0.79
COL12A1-202ENST00000345356 TRAV12-3A0A0B4J271 114 aa10.1□□□□□ -0.79
COL12A1-202ENST00000345356 SNRNP200O75643 2136 aaKnown RBP10.1□□□□□ -0.79
COL12A1-202ENST00000345356 KIF26BQ2KJY2 2108 aa10.1□□□□□ -0.79
COL12A1-202ENST00000345356 FAM214BQ7L5A3 538 aa10.1□□□□□ -0.79
COL12A1-202ENST00000345356 DLX4Q92988 240 aaPredicted RBP10.1□□□□□ -0.79
COL12A1-202ENST00000345356 RSPO3Q9BXY4 272 aaPredicted RBP10.1□□□□□ -0.79
COL12A1-202ENST00000345356 NHSL1Q5SYE7 1610 aa10.1□□□□□ -0.79
COL12A1-202ENST00000345356 ATP6V0BQ99437 205 aa10.1□□□□□ -0.79
COL12A1-202ENST00000345356 E9PQ18 207 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms