RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 ZNF114Q8NC26 417 aa12.16□□□□□ -0.46
ATG4B-201ENST00000344376 SCARB1Q8WTV0 552 aa12.16□□□□□ -0.46
ATG4B-201ENST00000344376 THAP7Q9BT49 309 aaPredicted RBP12.16□□□□□ -0.46
ATG4B-201ENST00000344376 SCP2D1Q9UJQ7 156 aa12.16□□□□□ -0.46
ATG4B-201ENST00000344376 IGHV3-21A0A0B4J1V1 117 aa12.15□□□□□ -0.46
ATG4B-201ENST00000344376 ANKRD20A5PA0PJZ0 165 aa12.15□□□□□ -0.46
ATG4B-201ENST00000344376 ELLP55199 621 aaPredicted RBP12.15□□□□□ -0.46
ATG4B-201ENST00000344376 CD81P60033 236 aa12.15□□□□□ -0.46
ATG4B-201ENST00000344376 ZNF57Q68EA5 555 aaPredicted RBP12.15□□□□□ -0.46
ATG4B-201ENST00000344376 MZT2BQ6NZ67 158 aa12.15□□□□□ -0.46
ATG4B-201ENST00000344376 UXS1Q8NBZ7 420 aa12.15□□□□□ -0.46
ATG4B-201ENST00000344376 OR51S1Q8NGJ8 323 aa12.15□□□□□ -0.46
ATG4B-201ENST00000344376 CACNG8Q8WXS5 425 aa12.15□□□□□ -0.46
ATG4B-201ENST00000344376 MISP3Q96FF7 219 aa12.15□□□□□ -0.46
ATG4B-201ENST00000344376 SCGB3A2Q96PL1 93 aa12.15□□□□□ -0.46
ATG4B-201ENST00000344376 ZNF436Q9C0F3 470 aaPredicted RBP12.15□□□□□ -0.46
ATG4B-201ENST00000344376 TMEM222Q9H0R3 208 aa12.15□□□□□ -0.46
ATG4B-201ENST00000344376 NAA60Q9H7X0 242 aa12.15□□□□□ -0.46
ATG4B-201ENST00000344376 C19orf73Q9NVV2 129 aa12.15□□□□□ -0.46
ATG4B-201ENST00000344376 IGHV3-35A0A0C4DH35 117 aa12.14□□□□□ -0.47
ATG4B-201ENST00000344376 K7EIM0 57 aa12.14□□□□□ -0.47
ATG4B-201ENST00000344376 IFNA17P01571 189 aa12.14□□□□□ -0.47
ATG4B-201ENST00000344376 P0C879 139 aa12.14□□□□□ -0.47
ATG4B-201ENST00000344376 EDN2P20800 178 aa12.14□□□□□ -0.47
ATG4B-201ENST00000344376 DHODHQ02127 395 aa12.14□□□□□ -0.47
ATG4B-201ENST00000344376 IZUMO4Q1ZYL8 232 aa12.14□□□□□ -0.47
ATG4B-201ENST00000344376 UNQ9165/PRO28630Q6UXU0 137 aa12.14□□□□□ -0.47
ATG4B-201ENST00000344376 RCHY1Q96PM5 261 aa12.14□□□□□ -0.47
ATG4B-201ENST00000344376 RTBDNQ9BSG5 229 aaPredicted RBP12.14□□□□□ -0.47
ATG4B-201ENST00000344376 C5orf66Q9H5L9 145 aa12.14□□□□□ -0.47
ATG4B-201ENST00000344376 ENY2Q9NPA8 101 aa12.14□□□□□ -0.47
ATG4B-201ENST00000344376 MCUBQ9NWR8 336 aa12.14□□□□□ -0.47
ATG4B-201ENST00000344376 A0A0B4J293 547 aa12.13□□□□□ -0.47
ATG4B-201ENST00000344376 OR5AC1P0C628 307 aa12.13□□□□□ -0.47
ATG4B-201ENST00000344376 SNCAP37840 140 aa12.13□□□□□ -0.47
ATG4B-201ENST00000344376 EIF2B2P49770 351 aaKnown RBP12.13□□□□□ -0.47
ATG4B-201ENST00000344376 TM4SF20Q53R12 229 aa12.13□□□□□ -0.47
ATG4B-201ENST00000344376 NRARPQ7Z6K4 114 aa12.13□□□□□ -0.47
ATG4B-201ENST00000344376 FAM219AQ8IW50 185 aa12.13□□□□□ -0.47
ATG4B-201ENST00000344376 TMEM190Q8WZ59 177 aa12.13□□□□□ -0.47
ATG4B-201ENST00000344376 MRPL27Q9P0M9 148 aaKnown RBP12.13□□□□□ -0.47
ATG4B-201ENST00000344376 GPR132Q9UNW8 380 aa12.13□□□□□ -0.47
ATG4B-201ENST00000344376 ZNF785A8K8V0 405 aa12.13□□□□□ -0.47
ATG4B-201ENST00000344376 NDUFA4O00483 81 aa12.13□□□□□ -0.47
ATG4B-201ENST00000344376 ST8SIA3O43173 380 aa12.13□□□□□ -0.47
ATG4B-201ENST00000344376 FAUP35544 74 aaKnown RBP12.13□□□□□ -0.47
ATG4B-201ENST00000344376 INPP1P49441 399 aa12.13□□□□□ -0.47
ATG4B-201ENST00000344376 HOXA1P49639 335 aaPredicted RBP12.13□□□□□ -0.47
ATG4B-201ENST00000344376 MFAP4P55083 255 aa12.13□□□□□ -0.47
ATG4B-201ENST00000344376 AP3S2P59780 193 aa12.13□□□□□ -0.47
ATG4B-201ENST00000344376 SPINK9Q5DT21 86 aa12.13□□□□□ -0.47
ATG4B-201ENST00000344376 SLC16A13Q7RTY0 426 aa12.13□□□□□ -0.47
ATG4B-201ENST00000344376 RBPMSQ93062 196 aaKnown RBP12.13□□□□□ -0.47
ATG4B-201ENST00000344376 TRIM63Q969Q1 353 aa12.13□□□□□ -0.47
ATG4B-201ENST00000344376 WDR89Q96FK6 387 aaPredicted RBP12.13□□□□□ -0.47
ATG4B-201ENST00000344376 DAZ1Q9NQZ3 744 aaKnown RBP12.13□□□□□ -0.47
ATG4B-201ENST00000344376 MLXQ9UH92 298 aa12.13□□□□□ -0.47
ATG4B-201ENST00000344376 CRYM-AS1A6NIL9 109 aa12.12□□□□□ -0.47
ATG4B-201ENST00000344376 INS-IGF2F8WCM5 200 aa12.12□□□□□ -0.47
ATG4B-201ENST00000344376 PLA2G10O15496 165 aa12.12□□□□□ -0.47
ATG4B-201ENST00000344376 NUPL2O15504 423 aaKnown RBP12.12□□□□□ -0.47
ATG4B-201ENST00000344376 CDS2O95674 445 aa12.12□□□□□ -0.47
ATG4B-201ENST00000344376 MT-CO2P00403 227 aa12.12□□□□□ -0.47
ATG4B-201ENST00000344376 SUB1P53999 127 aaKnown RBP eCLIP12.12□□□□□ -0.47
ATG4B-201ENST00000344376 RELQ04864 619 aaPredicted RBP12.12□□□□□ -0.47
ATG4B-201ENST00000344376 BTNL8Q6UX41 500 aa12.12□□□□□ -0.47
ATG4B-201ENST00000344376 RBPMS2Q6ZRY4 209 aaKnown RBP12.12□□□□□ -0.47
ATG4B-201ENST00000344376 TMEM61Q8N0U2 210 aa12.12□□□□□ -0.47
ATG4B-201ENST00000344376 DUSP18Q8NEJ0 188 aa12.12□□□□□ -0.47
ATG4B-201ENST00000344376 ENKURQ8TC29 256 aa12.12□□□□□ -0.47
ATG4B-201ENST00000344376 PINX1Q96BK5 328 aaKnown RBP12.12□□□□□ -0.47
ATG4B-201ENST00000344376 TXN2Q99757 166 aa12.12□□□□□ -0.47
ATG4B-201ENST00000344376 C7orf50Q9BRJ6 194 aaKnown RBP12.12□□□□□ -0.47
ATG4B-201ENST00000344376 CHRDL1Q9BU40 450 aa12.12□□□□□ -0.47
ATG4B-201ENST00000344376 KCNIP3Q9Y2W7 256 aa12.12□□□□□ -0.47
ATG4B-201ENST00000344376 I3L2K1 104 aa12.11□□□□□ -0.47
ATG4B-201ENST00000344376 LYRM1O43325 122 aa12.11□□□□□ -0.47
ATG4B-201ENST00000344376 C8orf88P0DMB2 117 aa12.11□□□□□ -0.47
ATG4B-201ENST00000344376 ANKRD55Q3KP44 614 aa12.11□□□□□ -0.47
ATG4B-201ENST00000344376 GLYATL2Q8WU03 294 aa12.11□□□□□ -0.47
ATG4B-201ENST00000344376 C20orf24Q9BUV8 137 aa12.11□□□□□ -0.47
ATG4B-201ENST00000344376 TRAV25A0A0B4J276 109 aa12.1□□□□□ -0.47
ATG4B-201ENST00000344376 F8W735 103 aaPredicted RBP12.1□□□□□ -0.47
ATG4B-201ENST00000344376 CORTO00230 105 aa12.1□□□□□ -0.47
ATG4B-201ENST00000344376 FCGR2BP31994 310 aaPredicted RBP12.1□□□□□ -0.47
ATG4B-201ENST00000344376 TMEM268Q5VZI3 342 aa12.1□□□□□ -0.47
ATG4B-201ENST00000344376 TM2D3Q9BRN9 247 aa12.1□□□□□ -0.47
ATG4B-201ENST00000344376 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.1□□□□□ -0.47
ATG4B-201ENST00000344376 SELENOKQ9Y6D0 94 aa12.1□□□□□ -0.47
ATG4B-201ENST00000344376 A0A0G2JRQ6 117 aa12.09□□□□□ -0.47
ATG4B-201ENST00000344376 GNG7O60262 68 aa12.09□□□□□ -0.47
ATG4B-201ENST00000344376 SCAF4O95104 1147 aaKnown RBP12.09□□□□□ -0.47
ATG4B-201ENST00000344376 CD7P09564 240 aa12.09□□□□□ -0.47
ATG4B-201ENST00000344376 ADMP35318 185 aa12.09□□□□□ -0.47
ATG4B-201ENST00000344376 SPCS3P61009 180 aa12.09□□□□□ -0.47
ATG4B-201ENST00000344376 CD300CQ08708 224 aa12.09□□□□□ -0.47
ATG4B-201ENST00000344376 SELENOHQ8IZQ5 122 aaKnown RBP12.09□□□□□ -0.47
ATG4B-201ENST00000344376 TOMM5Q8N4H5 51 aa12.09□□□□□ -0.47
ATG4B-201ENST00000344376 OR52B4Q8NGK2 314 aa12.09□□□□□ -0.47
ATG4B-201ENST00000344376 DEDD2Q8WXF8 326 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms