RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 BEX4Q9NWD9 120 aaPredicted RBP3.18□□□□□ -1.9
SYNE2-202ENST00000344113 ATP23Q9Y6H3 246 aa3.18□□□□□ -1.9
SYNE2-202ENST00000344113 ZFAND5O76080 213 aa3.18□□□□□ -1.9
SYNE2-202ENST00000344113 ZNF708P17019 499 aa3.18□□□□□ -1.9
SYNE2-202ENST00000344113 INSM2Q96T92 566 aaPredicted RBP3.18□□□□□ -1.9
SYNE2-202ENST00000344113 CFHR5Q9BXR6 569 aa3.18□□□□□ -1.9
SYNE2-202ENST00000344113 WNT10AQ9GZT5 417 aa3.18□□□□□ -1.9
SYNE2-202ENST00000344113 PRRC2AP48634 2157 aaKnown RBP3.18□□□□□ -1.9
SYNE2-202ENST00000344113 PI3P19957 117 aa3.18□□□□□ -1.9
SYNE2-202ENST00000344113 IFI27P40305 119 aaPredicted RBP3.18□□□□□ -1.9
SYNE2-202ENST00000344113 ASPHD1Q5U4P2 390 aa3.18□□□□□ -1.9
SYNE2-202ENST00000344113 CDPF1Q6NVV7 123 aa3.18□□□□□ -1.9
SYNE2-202ENST00000344113 FAM231DQ6ZW35 169 aa3.18□□□□□ -1.9
SYNE2-202ENST00000344113 PRR19A6NJB7 356 aa3.18□□□□□ -1.9
SYNE2-202ENST00000344113 GCHFRP30047 84 aa3.18□□□□□ -1.9
SYNE2-202ENST00000344113 TMEM187Q14656 261 aa3.18□□□□□ -1.9
SYNE2-202ENST00000344113 C2orf73Q8N5S3 287 aaPredicted RBP3.18□□□□□ -1.9
SYNE2-202ENST00000344113 MGST3O14880 152 aa3.18□□□□□ -1.9
SYNE2-202ENST00000344113 TBX6O95947 436 aaPredicted RBP3.18□□□□□ -1.9
SYNE2-202ENST00000344113 EGR2P11161 476 aaPredicted RBP3.18□□□□□ -1.9
SYNE2-202ENST00000344113 ID1P41134 155 aa3.18□□□□□ -1.9
SYNE2-202ENST00000344113 UNC119Q13432 240 aa3.18□□□□□ -1.9
SYNE2-202ENST00000344113 FGF11Q92914 225 aa3.18□□□□□ -1.9
SYNE2-202ENST00000344113 GJD4Q96KN9 370 aaPredicted RBP3.18□□□□□ -1.9
SYNE2-202ENST00000344113 KIAA1644Q3SXP7 199 aa3.18□□□□□ -1.9
SYNE2-202ENST00000344113 GTSF1Q8WW33 167 aa3.18□□□□□ -1.9
SYNE2-202ENST00000344113 SLC25A38Q96DW6 304 aa3.18□□□□□ -1.9
SYNE2-202ENST00000344113 HOXA4Q00056 320 aaPredicted RBP3.18□□□□□ -1.9
SYNE2-202ENST00000344113 POU3F1Q03052 451 aaPredicted RBP3.18□□□□□ -1.9
SYNE2-202ENST00000344113 PEMTQ9UBM1 199 aa3.18□□□□□ -1.9
SYNE2-202ENST00000344113 MDKP21741 143 aaPredicted RBP3.18□□□□□ -1.9
SYNE2-202ENST00000344113 GP6Q9HCN6 339 aa3.18□□□□□ -1.9
SYNE2-202ENST00000344113 IAPPP10997 89 aa3.18□□□□□ -1.9
SYNE2-202ENST00000344113 LINC00643Q86TS7 51 aa3.18□□□□□ -1.9
SYNE2-202ENST00000344113 MBNL3Q9NUK0 354 aaKnown RBP3.18□□□□□ -1.9
SYNE2-202ENST00000344113 ZNF785A8K8V0 405 aa3.18□□□□□ -1.9
SYNE2-202ENST00000344113 TMEM230Q96A57 120 aa3.18□□□□□ -1.9
SYNE2-202ENST00000344113 PAQR4Q8N4S7 273 aaPredicted RBP3.18□□□□□ -1.9
SYNE2-202ENST00000344113 PGLYRP4Q96LB8 373 aa3.18□□□□□ -1.9
SYNE2-202ENST00000344113 PRORYQ9H606 182 aa3.18□□□□□ -1.9
SYNE2-202ENST00000344113 IGLV3-10A0A075B6K4 115 aa3.18□□□□□ -1.9
SYNE2-202ENST00000344113 LEPROTO15243 131 aa3.18□□□□□ -1.9
SYNE2-202ENST00000344113 P04436 131 aa3.18□□□□□ -1.9
SYNE2-202ENST00000344113 LIFP15018 202 aa3.18□□□□□ -1.9
SYNE2-202ENST00000344113 MUC4Q99102 2169 aa3.18□□□□□ -1.9
SYNE2-202ENST00000344113 CTLA4P16410 223 aa3.18□□□□□ -1.9
SYNE2-202ENST00000344113 UBE2AP49459 152 aa3.18□□□□□ -1.9
SYNE2-202ENST00000344113 SUSD3Q96L08 255 aa3.18□□□□□ -1.9
SYNE2-202ENST00000344113 TTTY10Q9BZA0 68 aa3.18□□□□□ -1.9
SYNE2-202ENST00000344113 FAM78AQ5JUQ0 283 aa3.17□□□□□ -1.9
SYNE2-202ENST00000344113 MIC13Q5XKP0 118 aa3.17□□□□□ -1.9
SYNE2-202ENST00000344113 PLXDC1Q8IUK5 500 aa3.17□□□□□ -1.9
SYNE2-202ENST00000344113 RETNQ9HD89 108 aa3.17□□□□□ -1.9
SYNE2-202ENST00000344113 KLK14Q9P0G3 267 aa3.17□□□□□ -1.9
SYNE2-202ENST00000344113 H7C2G1 150 aa3.17□□□□□ -1.9
SYNE2-202ENST00000344113 CGAP01215 116 aa3.17□□□□□ -1.9
SYNE2-202ENST00000344113 WFDC12Q8WWY7 111 aa3.17□□□□□ -1.9
SYNE2-202ENST00000344113 CICQ96RK0 1608 aaPredicted RBP3.17□□□□□ -1.9
SYNE2-202ENST00000344113 TRBV5-4A0A0C4DH59 114 aa3.17□□□□□ -1.9
SYNE2-202ENST00000344113 HOXD3P31249 432 aaPredicted RBP3.17□□□□□ -1.9
SYNE2-202ENST00000344113 TM2D2Q9BX73 214 aa3.17□□□□□ -1.9
SYNE2-202ENST00000344113 ZNF319Q9P2F9 582 aa3.17□□□□□ -1.9
SYNE2-202ENST00000344113 A0A1W2PS18 150 aa3.17□□□□□ -1.9
SYNE2-202ENST00000344113 CCL8P80075 99 aa3.17□□□□□ -1.9
SYNE2-202ENST00000344113 SCAMP5Q8TAC9 235 aa3.17□□□□□ -1.9
SYNE2-202ENST00000344113 CNRIP1Q96F85 164 aaPredicted RBP3.17□□□□□ -1.9
SYNE2-202ENST00000344113 KIF13BQ9NQT8 1826 aa3.17□□□□□ -1.9
SYNE2-202ENST00000344113 CLDN14O95500 239 aa3.17□□□□□ -1.9
SYNE2-202ENST00000344113 MDP1Q86V88 176 aa3.17□□□□□ -1.9
SYNE2-202ENST00000344113 KLK13Q9UKR3 277 aa3.17□□□□□ -1.9
SYNE2-202ENST00000344113 MAP2P11137 1827 aaKnown RBP3.17□□□□□ -1.9
SYNE2-202ENST00000344113 SSC5DA1L4H1 1573 aa3.17□□□□□ -1.9
SYNE2-202ENST00000344113 C8orf86Q6ZUL3 223 aa3.17□□□□□ -1.9
SYNE2-202ENST00000344113 PHF3Q92576 2039 aaKnown RBP3.17□□□□□ -1.9
SYNE2-202ENST00000344113 USP17L23D6RBM5 183 aa3.17□□□□□ -1.9
SYNE2-202ENST00000344113 M0R135 149 aa3.17□□□□□ -1.9
SYNE2-202ENST00000344113 ARL14EPLP0DKL9 152 aa3.17□□□□□ -1.9
SYNE2-202ENST00000344113 IL11RAQ14626 422 aa3.17□□□□□ -1.9
SYNE2-202ENST00000344113 ICAM4Q14773 271 aa3.17□□□□□ -1.9
SYNE2-202ENST00000344113 ECSCRQ19T08 205 aa3.17□□□□□ -1.9
SYNE2-202ENST00000344113 CEND1Q8N111 149 aa3.17□□□□□ -1.9
SYNE2-202ENST00000344113 ZNF799Q96GE5 643 aa3.17□□□□□ -1.9
SYNE2-202ENST00000344113 LRRC37A3O60309 1634 aa3.17□□□□□ -1.9
SYNE2-202ENST00000344113 hDV102S1A0JD36 115 aa3.17□□□□□ -1.9
SYNE2-202ENST00000344113 CCL22O00626 93 aa3.17□□□□□ -1.9
SYNE2-202ENST00000344113 SS18L1O75177 396 aaPredicted RBP3.17□□□□□ -1.9
SYNE2-202ENST00000344113 MRPL33O75394 65 aaKnown RBP3.17□□□□□ -1.9
SYNE2-202ENST00000344113 CRIM1Q9NZV1 1036 aa3.17□□□□□ -1.9
SYNE2-202ENST00000344113 MPV17P39210 176 aa3.17□□□□□ -1.9
SYNE2-202ENST00000344113 A0A0B4J2C4 111 aa3.17□□□□□ -1.9
SYNE2-202ENST00000344113 MP68P56378 58 aa3.17□□□□□ -1.9
SYNE2-202ENST00000344113 SRSF3P84103 164 aaKnown RBP3.17□□□□□ -1.9
SYNE2-202ENST00000344113 SRSF2Q01130 221 aaKnown RBP3.17□□□□□ -1.9
SYNE2-202ENST00000344113 BAALCQ8WXS3 180 aa3.17□□□□□ -1.9
SYNE2-202ENST00000344113 GLIS2Q9BZE0 524 aaPredicted RBP3.17□□□□□ -1.9
SYNE2-202ENST00000344113 IL23AQ9NPF7 189 aa3.17□□□□□ -1.9
SYNE2-202ENST00000344113 CXorf66Q5JRM2 361 aaPredicted RBP3.17□□□□□ -1.9
SYNE2-202ENST00000344113 C11orf52Q96A22 123 aa3.17□□□□□ -1.9
SYNE2-202ENST00000344113 RNF183Q96D59 192 aa3.17□□□□□ -1.9
SYNE2-202ENST00000344113 PRR15LQ9BU68 103 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms