RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 NUDT11Q96G61 164 aa7.89□□□□□ -1.15
HOXA1-201ENST00000343060 SLC25A2Q9BXI2 301 aa7.89□□□□□ -1.15
HOXA1-201ENST00000343060 GCM1Q9NP62 436 aa7.89□□□□□ -1.15
HOXA1-201ENST00000343060 OBP2BQ9NPH6 170 aa7.89□□□□□ -1.15
HOXA1-201ENST00000343060 ZNF355PQ9NSJ1 428 aa7.89□□□□□ -1.15
HOXA1-201ENST00000343060 CLEC5AQ9NY25 188 aa7.89□□□□□ -1.15
HOXA1-201ENST00000343060 DUSP13Q9UII6 198 aa7.89□□□□□ -1.15
HOXA1-201ENST00000343060 ZNF257Q9Y2Q1 563 aa7.89□□□□□ -1.15
HOXA1-201ENST00000343060 SYS1-DBNDD2H3BUS1 97 aa7.89□□□□□ -1.15
HOXA1-201ENST00000343060 ZNF134P52741 427 aa7.89□□□□□ -1.15
HOXA1-201ENST00000343060 PRCDQ00LT1 54 aa7.89□□□□□ -1.15
HOXA1-201ENST00000343060 C2orf83Q53S99 150 aa7.89□□□□□ -1.15
HOXA1-201ENST00000343060 C1orf229Q6ZS94 237 aaPredicted RBP7.89□□□□□ -1.15
HOXA1-201ENST00000343060 CXorf67Q86X51 503 aaPredicted RBP7.89□□□□□ -1.15
HOXA1-201ENST00000343060 NHLRC2Q8NBF2 726 aa7.89□□□□□ -1.15
HOXA1-201ENST00000343060 ZNF714Q96N38 554 aa7.89□□□□□ -1.15
HOXA1-201ENST00000343060 HES7Q9BYE0 225 aa7.89□□□□□ -1.15
HOXA1-201ENST00000343060 FAM234AQ9H0X4 552 aa7.89□□□□□ -1.15
HOXA1-201ENST00000343060 C12orf49Q9H741 205 aa7.89□□□□□ -1.15
HOXA1-201ENST00000343060 SCRT2Q9NQ03 307 aa7.89□□□□□ -1.15
HOXA1-201ENST00000343060 FSCN3Q9NQT6 498 aa7.89□□□□□ -1.15
HOXA1-201ENST00000343060 ZNF835Q9Y2P0 537 aa7.89□□□□□ -1.15
HOXA1-201ENST00000343060 CFAP54Q96N23 3096 aa7.89□□□□□ -1.15
HOXA1-201ENST00000343060 OR2T8A6NH00 312 aa7.88□□□□□ -1.15
HOXA1-201ENST00000343060 VWC2LB2RUY7 222 aa7.88□□□□□ -1.15
HOXA1-201ENST00000343060 CD5LO43866 347 aa7.88□□□□□ -1.15
HOXA1-201ENST00000343060 LTC4SQ16873 150 aa7.88□□□□□ -1.15
HOXA1-201ENST00000343060 FAM71F2Q6NXP2 309 aa7.88□□□□□ -1.15
HOXA1-201ENST00000343060 SMIM12Q96EX1 92 aa7.88□□□□□ -1.15
HOXA1-201ENST00000343060 VPS25Q9BRG1 176 aa7.88□□□□□ -1.15
HOXA1-201ENST00000343060 TP73-AS1Q9UF72 201 aa7.88□□□□□ -1.15
HOXA1-201ENST00000343060 PRNDQ9UKY0 176 aa7.88□□□□□ -1.15
HOXA1-201ENST00000343060 IGHV1-24A0A0C4DH33 117 aa7.88□□□□□ -1.15
HOXA1-201ENST00000343060 HIGD1CA8MV81 97 aa7.88□□□□□ -1.15
HOXA1-201ENST00000343060 PEX7O00628 323 aa7.88□□□□□ -1.15
HOXA1-201ENST00000343060 NUDT3O95989 172 aa7.88□□□□□ -1.15
HOXA1-201ENST00000343060 UBE2L3P68036 154 aaKnown RBP7.88□□□□□ -1.15
HOXA1-201ENST00000343060 C3AR1Q16581 482 aa7.88□□□□□ -1.15
HOXA1-201ENST00000343060 ALKBH2Q6NS38 261 aa7.88□□□□□ -1.15
HOXA1-201ENST00000343060 ZNF329Q86UD4 541 aa7.88□□□□□ -1.15
HOXA1-201ENST00000343060 CT55Q8WUE5 264 aa7.88□□□□□ -1.15
HOXA1-201ENST00000343060 ST6GALNAC6Q969X2 333 aa7.88□□□□□ -1.15
HOXA1-201ENST00000343060 CSTL1Q9H114 145 aa7.88□□□□□ -1.15
HOXA1-201ENST00000343060 MS4A6AQ9H2W1 248 aa7.88□□□□□ -1.15
HOXA1-201ENST00000343060 NCOR1P1Q9H4R4 102 aa7.88□□□□□ -1.15
HOXA1-201ENST00000343060 WASHC3Q9Y3C0 194 aa7.88□□□□□ -1.15
HOXA1-201ENST00000343060 AMMECR1Q9Y4X0 333 aaPredicted RBP7.88□□□□□ -1.15
HOXA1-201ENST00000343060 OR51B2Q9Y5P1 312 aa7.88□□□□□ -1.15
HOXA1-201ENST00000343060 SOX21Q9Y651 276 aaPredicted RBP7.88□□□□□ -1.15
HOXA1-201ENST00000343060 COL27A1Q8IZC6 1860 aaPredicted RBP7.87□□□□□ -1.15
HOXA1-201ENST00000343060 MUC21A0A0G2JKD1 596 aa7.87□□□□□ -1.15
HOXA1-201ENST00000343060 MUC21A0A140T8X8 626 aa7.87□□□□□ -1.15
HOXA1-201ENST00000343060 HIST1H1EP10412 219 aaKnown RBP7.87□□□□□ -1.15
HOXA1-201ENST00000343060 PRDX2P32119 198 aa7.87□□□□□ -1.15
HOXA1-201ENST00000343060 GPR6P46095 362 aaPredicted RBP7.87□□□□□ -1.15
HOXA1-201ENST00000343060 HIST1H1AQ02539 215 aaPredicted RBP7.87□□□□□ -1.15
HOXA1-201ENST00000343060 EDDM3AQ14507 147 aa7.87□□□□□ -1.15
HOXA1-201ENST00000343060 MUC21Q5SSG8 566 aa7.87□□□□□ -1.15
HOXA1-201ENST00000343060 MOB3BQ86TA1 216 aa7.87□□□□□ -1.15
HOXA1-201ENST00000343060 OR1L8Q8NGR8 309 aa7.87□□□□□ -1.15
HOXA1-201ENST00000343060 TMEM191AQ9H0A3 160 aa7.87□□□□□ -1.15
HOXA1-201ENST00000343060 MGST3O14880 152 aa7.87□□□□□ -1.15
HOXA1-201ENST00000343060 OR5AL1P0C617 328 aa7.87□□□□□ -1.15
HOXA1-201ENST00000343060 CGB3P0DN86 165 aa7.87□□□□□ -1.15
HOXA1-201ENST00000343060 CGB7P0DN87 165 aa7.87□□□□□ -1.15
HOXA1-201ENST00000343060 GATA2P23769 480 aaPredicted RBP7.87□□□□□ -1.15
HOXA1-201ENST00000343060 MYCNOSP40205 109 aa7.87□□□□□ -1.15
HOXA1-201ENST00000343060 HBBP68871 147 aa7.87□□□□□ -1.15
HOXA1-201ENST00000343060 PSG9Q00887 426 aa7.87□□□□□ -1.15
HOXA1-201ENST00000343060 CT83Q5H943 113 aa7.87□□□□□ -1.15
HOXA1-201ENST00000343060 PET117Q6UWS5 81 aa7.87□□□□□ -1.15
HOXA1-201ENST00000343060 ADTRPQ96IZ2 230 aa7.87□□□□□ -1.15
HOXA1-201ENST00000343060 LINC00479Q96M42 142 aa7.87□□□□□ -1.15
HOXA1-201ENST00000343060 ZPBPQ9BS86 351 aa7.87□□□□□ -1.15
HOXA1-201ENST00000343060 SSBP4Q9BWG4 385 aaPredicted RBP7.87□□□□□ -1.15
HOXA1-201ENST00000343060 CLCF1Q9UBD9 225 aa7.87□□□□□ -1.15
HOXA1-201ENST00000343060 IGKV1D-17A0A075B6S4 117 aa7.86□□□□□ -1.15
HOXA1-201ENST00000343060 hDV102S1A0JD36 115 aa7.86□□□□□ -1.15
HOXA1-201ENST00000343060 CBY3A6NI87 242 aa7.86□□□□□ -1.15
HOXA1-201ENST00000343060 SP9P0CG40 484 aa7.86□□□□□ -1.15
HOXA1-201ENST00000343060 RNASE2P10153 161 aaKnown RBP7.86□□□□□ -1.15
HOXA1-201ENST00000343060 MORN5Q5VZ52 161 aa7.86□□□□□ -1.15
HOXA1-201ENST00000343060 AMMECR1LQ6DCA0 310 aa7.86□□□□□ -1.15
HOXA1-201ENST00000343060 INO80CQ6PI98 192 aaPredicted RBP7.86□□□□□ -1.15
HOXA1-201ENST00000343060 OR2T6Q8NHC8 308 aa7.86□□□□□ -1.15
HOXA1-201ENST00000343060 PLPPR2Q96GM1 343 aa7.86□□□□□ -1.15
HOXA1-201ENST00000343060 DNAJC13O75165 2243 aa7.86□□□□□ -1.15
HOXA1-201ENST00000343060 EYSQ5T1H1 3165 aa7.86□□□□□ -1.15
HOXA1-201ENST00000343060 SH2D7A6NKC9 451 aaPredicted RBP7.86□□□□□ -1.15
HOXA1-201ENST00000343060 K7ERU9 68 aa7.86□□□□□ -1.15
HOXA1-201ENST00000343060 UPK2O00526 184 aa7.86□□□□□ -1.15
HOXA1-201ENST00000343060 MYOD1P15172 320 aa7.86□□□□□ -1.15
HOXA1-201ENST00000343060 IGHV1-2P23083 117 aa7.86□□□□□ -1.15
HOXA1-201ENST00000343060 BPIFB3P59826 476 aa7.86□□□□□ -1.15
HOXA1-201ENST00000343060 CD69Q07108 199 aa7.86□□□□□ -1.15
HOXA1-201ENST00000343060 ZNF841Q6ZN19 808 aa7.86□□□□□ -1.15
HOXA1-201ENST00000343060 LINC00173Q6ZV60 143 aa7.86□□□□□ -1.15
HOXA1-201ENST00000343060 SSX8Q7RTT4 187 aa7.86□□□□□ -1.15
HOXA1-201ENST00000343060 OR9G1Q8NH87 305 aa7.86□□□□□ -1.15
HOXA1-201ENST00000343060 CALYQ9NYX4 217 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms