RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 CENPFP49454 3210 aa5.97□□□□□ -1.45
VCAN-202ENST00000342785 OR2T8A6NH00 312 aa5.97□□□□□ -1.45
VCAN-202ENST00000342785 IFITM10A6NMD0 228 aa5.97□□□□□ -1.45
VCAN-202ENST00000342785 NPIPB11E5RHQ5 1161 aa5.97□□□□□ -1.45
VCAN-202ENST00000342785 J3KRW8 73 aa5.97□□□□□ -1.45
VCAN-202ENST00000342785 LIPFP07098 398 aa5.97□□□□□ -1.45
VCAN-202ENST00000342785 SOD3P08294 240 aa5.97□□□□□ -1.45
VCAN-202ENST00000342785 MFAP4P55083 255 aa5.97□□□□□ -1.45
VCAN-202ENST00000342785 TEX38Q6PEX7 206 aa5.97□□□□□ -1.45
VCAN-202ENST00000342785 CD177Q8N6Q3 437 aa5.97□□□□□ -1.45
VCAN-202ENST00000342785 GGTLC1Q9BX51 225 aa5.97□□□□□ -1.45
VCAN-202ENST00000342785 UQCR10Q9UDW1 63 aa5.97□□□□□ -1.45
VCAN-202ENST00000342785 TMEM189A5PLL7 270 aa5.97□□□□□ -1.45
VCAN-202ENST00000342785 IL4P05112 153 aa5.97□□□□□ -1.45
VCAN-202ENST00000342785 CD69Q07108 199 aa5.97□□□□□ -1.45
VCAN-202ENST00000342785 TCF23Q7RTU1 214 aa5.97□□□□□ -1.45
VCAN-202ENST00000342785 ZCCHC14Q8WYQ9 949 aaKnown RBP5.97□□□□□ -1.45
VCAN-202ENST00000342785 HSPB8Q9UJY1 196 aa5.97□□□□□ -1.45
VCAN-202ENST00000342785 CBY3A6NI87 242 aa5.97□□□□□ -1.45
VCAN-202ENST00000342785 APOBEC3AP31941 199 aaPredicted RBP5.97□□□□□ -1.45
VCAN-202ENST00000342785 SPATA45Q537H7 98 aa5.97□□□□□ -1.45
VCAN-202ENST00000342785 HELZP42694 1942 aaKnown RBP5.96□□□□□ -1.45
VCAN-202ENST00000342785 PLXND1Q9Y4D7 1925 aa5.96□□□□□ -1.45
VCAN-202ENST00000342785 IGLV3-1P01715 115 aa5.96□□□□□ -1.45
VCAN-202ENST00000342785 PPOXP50336 477 aa5.96□□□□□ -1.45
VCAN-202ENST00000342785 C1QL4Q86Z23 238 aa5.96□□□□□ -1.45
VCAN-202ENST00000342785 ATOH7Q8N100 152 aa5.96□□□□□ -1.45
VCAN-202ENST00000342785 TMEM116Q8NCL8 245 aa5.96□□□□□ -1.45
VCAN-202ENST00000342785 OR52E5Q8NH55 327 aa5.96□□□□□ -1.45
VCAN-202ENST00000342785 EAF1Q96JC9 268 aaPredicted RBP5.96□□□□□ -1.45
VCAN-202ENST00000342785 GOLT1BQ9Y3E0 138 aa5.96□□□□□ -1.45
VCAN-202ENST00000342785 HINT1P49773 126 aaPredicted RBP5.96□□□□□ -1.46
VCAN-202ENST00000342785 PRCDQ00LT1 54 aa5.96□□□□□ -1.46
VCAN-202ENST00000342785 UNQ5815/PRO19632Q6UWF5 114 aa5.96□□□□□ -1.46
VCAN-202ENST00000342785 HIST3H2BBQ8N257 126 aa5.96□□□□□ -1.46
VCAN-202ENST00000342785 CYYR1Q96J86 154 aa5.96□□□□□ -1.46
VCAN-202ENST00000342785 MBNL3Q9NUK0 354 aaKnown RBP5.96□□□□□ -1.46
VCAN-202ENST00000342785 DPM3Q9P2X0 92 aa5.96□□□□□ -1.46
VCAN-202ENST00000342785 TLN1Q9Y490 2541 aaKnown RBP5.96□□□□□ -1.46
VCAN-202ENST00000342785 PEX7O00628 323 aa5.96□□□□□ -1.46
VCAN-202ENST00000342785 IGHV1-46P01743 117 aa5.96□□□□□ -1.46
VCAN-202ENST00000342785 RPL7P18124 248 aaKnown RBP5.96□□□□□ -1.46
VCAN-202ENST00000342785 TAS2R60P59551 318 aa5.96□□□□□ -1.46
VCAN-202ENST00000342785 FAM90A2PQ658T7 463 aa5.96□□□□□ -1.46
VCAN-202ENST00000342785 TRAV3A0A0B4J244 114 aa5.96□□□□□ -1.46
VCAN-202ENST00000342785 SERF1AO75920 110 aa5.96□□□□□ -1.46
VCAN-202ENST00000342785 NEU1Q99519 415 aa5.96□□□□□ -1.46
VCAN-202ENST00000342785 RNASE7Q9H1E1 156 aaKnown RBP5.96□□□□□ -1.46
VCAN-202ENST00000342785 DOCK11Q5JSL3 2073 aa5.96□□□□□ -1.46
VCAN-202ENST00000342785 PYY3Q5JQD4 70 aa5.96□□□□□ -1.46
VCAN-202ENST00000342785 C10orf55Q5SWW7 151 aa5.96□□□□□ -1.46
VCAN-202ENST00000342785 LINC01551Q86U37 167 aa5.96□□□□□ -1.46
VCAN-202ENST00000342785 SLC25A33Q9BSK2 321 aa5.96□□□□□ -1.46
VCAN-202ENST00000342785 CDC42EP3Q9UKI2 254 aa5.96□□□□□ -1.46
VCAN-202ENST00000342785 A0A1W2PRE2 83 aa5.95□□□□□ -1.46
VCAN-202ENST00000342785 J3QR89 54 aa5.95□□□□□ -1.46
VCAN-202ENST00000342785 JOSD1Q15040 202 aaPredicted RBP5.95□□□□□ -1.46
VCAN-202ENST00000342785 RNF138Q8WVD3 245 aa5.95□□□□□ -1.46
VCAN-202ENST00000342785 LOC389332A0A1B0GUA5 103 aa5.95□□□□□ -1.46
VCAN-202ENST00000342785 FAM90A9PA6NNJ1 464 aa5.95□□□□□ -1.46
VCAN-202ENST00000342785 RNASEH2CQ8TDP1 164 aaKnown RBP5.95□□□□□ -1.46
VCAN-202ENST00000342785 DERL1Q9BUN8 251 aa5.95□□□□□ -1.46
VCAN-202ENST00000342785 SEPSECSQ9HD40 501 aaKnown RBP5.95□□□□□ -1.46
VCAN-202ENST00000342785 SLC25A15Q9Y619 301 aa5.95□□□□□ -1.46
VCAN-202ENST00000342785 BMI1P35226 326 aa5.95□□□□□ -1.46
VCAN-202ENST00000342785 PAX9P55771 341 aa5.95□□□□□ -1.46
VCAN-202ENST00000342785 GPR82Q96P67 336 aa5.95□□□□□ -1.46
VCAN-202ENST00000342785 CRIM1Q9NZV1 1036 aa5.95□□□□□ -1.46
VCAN-202ENST00000342785 TBL2Q9Y4P3 447 aaKnown RBP5.95□□□□□ -1.46
VCAN-202ENST00000342785 NCOR2Q9Y618 2525 aa5.95□□□□□ -1.46
VCAN-202ENST00000342785 ZNF503-AS2A6NEH8 195 aa5.95□□□□□ -1.46
VCAN-202ENST00000342785 DPRXA6NFQ7 191 aa5.95□□□□□ -1.46
VCAN-202ENST00000342785 FAM106CPP0CH98 169 aa5.95□□□□□ -1.46
VCAN-202ENST00000342785 PYYP10082 97 aa5.95□□□□□ -1.46
VCAN-202ENST00000342785 TBR1Q16650 682 aa5.95□□□□□ -1.46
VCAN-202ENST00000342785 S4R3C0 116 aa5.95□□□□□ -1.46
VCAN-202ENST00000342785 TRAV9-1A0A075B6T8 112 aa5.95□□□□□ -1.46
VCAN-202ENST00000342785 TRAV30A0A087WSZ9 112 aa5.95□□□□□ -1.46
VCAN-202ENST00000342785 GFRA3O60609 400 aa5.95□□□□□ -1.46
VCAN-202ENST00000342785 IGHG3P01860 377 aa5.95□□□□□ -1.46
VCAN-202ENST00000342785 HBBP68871 147 aa5.95□□□□□ -1.46
VCAN-202ENST00000342785 PRB3Q04118 309 aaPredicted RBP5.95□□□□□ -1.46
VCAN-202ENST00000342785 ANOS1P23352 680 aa5.95□□□□□ -1.46
VCAN-202ENST00000342785 CKS2P33552 79 aa5.95□□□□□ -1.46
VCAN-202ENST00000342785 SRSF6Q13247 344 aaKnown RBP5.95□□□□□ -1.46
VCAN-202ENST00000342785 SPANXN1Q5VSR9 72 aa5.95□□□□□ -1.46
VCAN-202ENST00000342785 OR10W1Q8NGF6 305 aa5.95□□□□□ -1.46
VCAN-202ENST00000342785 LOC105371242A0A075B767 164 aa5.94□□□□□ -1.46
VCAN-202ENST00000342785 IGHV3OR16-13A0A075B7E8 117 aa5.94□□□□□ -1.46
VCAN-202ENST00000342785 IGHV3-74A0A0B4J1X5 117 aa5.94□□□□□ -1.46
VCAN-202ENST00000342785 C15orf62A8K5M9 175 aa5.94□□□□□ -1.46
VCAN-202ENST00000342785 AMBPP02760 352 aa5.94□□□□□ -1.46
VCAN-202ENST00000342785 TCTAP57738 103 aa5.94□□□□□ -1.46
VCAN-202ENST00000342785 SPATA31B1PQ5VZV4 182 aa5.94□□□□□ -1.46
VCAN-202ENST00000342785 FAM19A2Q8N3H0 131 aa5.94□□□□□ -1.46
VCAN-202ENST00000342785 AGMATQ9BSE5 352 aa5.94□□□□□ -1.46
VCAN-202ENST00000342785 PIEZO2Q9H5I5 2752 aa5.94□□□□□ -1.46
VCAN-202ENST00000342785 IGKV1D-17A0A075B6S4 117 aa5.94□□□□□ -1.46
VCAN-202ENST00000342785 TMEM78Q5T7P6 136 aa5.94□□□□□ -1.46
VCAN-202ENST00000342785 MBNL2Q5VZF2 373 aaKnown RBP5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 130.4 ms