RNA–Protein interactions for RNA: ENST00000342690.4

RBM38-201, Transcript of RNA binding motif protein 38, humanhuman

TSL 3

Gene RBM38, Length 852 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM38-201ENST00000342690 LSM5Q9Y4Y9 91 aaKnown RBP17.03■□□□□ 0.32
RBM38-201ENST00000342690 CORTO00230 105 aa17.02■□□□□ 0.32
RBM38-201ENST00000342690 MFAP2P55001 183 aa17.02■□□□□ 0.32
RBM38-201ENST00000342690 H2BFSP57053 126 aa17.02■□□□□ 0.32
RBM38-201ENST00000342690 BSXQ3C1V8 233 aa17.02■□□□□ 0.32
RBM38-201ENST00000342690 C2orf83Q53S99 150 aa17.02■□□□□ 0.32
RBM38-201ENST00000342690 C11orf87Q6NUJ2 197 aa17.02■□□□□ 0.32
RBM38-201ENST00000342690 C4orf3Q8WVX3 66 aa17.02■□□□□ 0.32
RBM38-201ENST00000342690 RAB40CQ96S21 281 aa17.02■□□□□ 0.32
RBM38-201ENST00000342690 RCL1Q9Y2P8 373 aaKnown RBP17.02■□□□□ 0.32
RBM38-201ENST00000342690 DMRT1Q9Y5R6 373 aa17.02■□□□□ 0.32
RBM38-201ENST00000342690 K7EPK0 472 aa17.01■□□□□ 0.31
RBM38-201ENST00000342690 ATP5IP56385 69 aaPredicted RBP17.01■□□□□ 0.31
RBM38-201ENST00000342690 EXOSC2Q13868 293 aaKnown RBP17.01■□□□□ 0.31
RBM38-201ENST00000342690 C15orf32Q32M92 178 aa17.01■□□□□ 0.31
RBM38-201ENST00000342690 OR11H7Q8NGC8 314 aa17.01■□□□□ 0.31
RBM38-201ENST00000342690 L7N2F9 121 aa17■□□□□ 0.31
RBM38-201ENST00000342690 NDUFB8O95169 186 aa17■□□□□ 0.31
RBM38-201ENST00000342690 IGHV3-11P01762 117 aa17■□□□□ 0.31
RBM38-201ENST00000342690 CXCL3P19876 107 aa17■□□□□ 0.31
RBM38-201ENST00000342690 PVALBP20472 110 aaPredicted RBP17■□□□□ 0.31
RBM38-201ENST00000342690 VAMP2P63027 116 aa17■□□□□ 0.31
RBM38-201ENST00000342690 IL15RAQ13261 267 aa17■□□□□ 0.31
RBM38-201ENST00000342690 RAB32Q13637 225 aa17■□□□□ 0.31
RBM38-201ENST00000342690 ETV3LQ6ZN32 361 aa17■□□□□ 0.31
RBM38-201ENST00000342690 EEF1AKMT3Q96AZ1 226 aa17■□□□□ 0.31
RBM38-201ENST00000342690 CXorf58Q96LI9 332 aa17■□□□□ 0.31
RBM38-201ENST00000342690 OR5B12Q96R08 314 aa17■□□□□ 0.31
RBM38-201ENST00000342690 PSENENQ9NZ42 101 aa17■□□□□ 0.31
RBM38-201ENST00000342690 LGALS1P09382 135 aaKnown RBP16.99■□□□□ 0.31
RBM38-201ENST00000342690 RAB11AP62491 216 aa16.99■□□□□ 0.31
RBM38-201ENST00000342690 DEFB136Q30KP8 78 aa16.99■□□□□ 0.31
RBM38-201ENST00000342690 Q6ZNX1 250 aa16.99■□□□□ 0.31
RBM38-201ENST00000342690 PINX1Q96BK5 328 aaKnown RBP16.99■□□□□ 0.31
RBM38-201ENST00000342690 SMIM8Q96KF7 97 aa16.99■□□□□ 0.31
RBM38-201ENST00000342690 DUX3Q96PT4 197 aa16.99■□□□□ 0.31
RBM38-201ENST00000342690 PAIP2BQ9ULR5 123 aaKnown RBP16.99■□□□□ 0.31
RBM38-201ENST00000342690 STRAPQ9Y3F4 350 aaKnown RBP16.99■□□□□ 0.31
RBM38-201ENST00000342690 I3L521 148 aa16.98■□□□□ 0.31
RBM38-201ENST00000342690 RLN2P04090 185 aa16.98■□□□□ 0.31
RBM38-201ENST00000342690 OR8U8P0C7N1 319 aa16.98■□□□□ 0.31
RBM38-201ENST00000342690 TAS2R30P59541 319 aa16.98■□□□□ 0.31
RBM38-201ENST00000342690 LRRC37A5PQ49AS3 106 aa16.98■□□□□ 0.31
RBM38-201ENST00000342690 FAM209BQ5JX69 171 aa16.98■□□□□ 0.31
RBM38-201ENST00000342690 SPANXN5Q5MJ07 72 aa16.98■□□□□ 0.31
RBM38-201ENST00000342690 PVRIGQ6DKI7 326 aa16.98■□□□□ 0.31
RBM38-201ENST00000342690 TREML4Q6UXN2 200 aa16.98■□□□□ 0.31
RBM38-201ENST00000342690 RNASEH2CQ8TDP1 164 aaKnown RBP16.98■□□□□ 0.31
RBM38-201ENST00000342690 VN1R17PQ8TDU5 208 aa16.98■□□□□ 0.31
RBM38-201ENST00000342690 RAX2Q96IS3 184 aa16.98■□□□□ 0.31
RBM38-201ENST00000342690 TRBV7-1A0A0A6YYK4 115 aa16.97■□□□□ 0.31
RBM38-201ENST00000342690 H3BP45 60 aa16.97■□□□□ 0.31
RBM38-201ENST00000342690 PF4P02776 101 aa16.97■□□□□ 0.31
RBM38-201ENST00000342690 IFNA4P05014 189 aa16.97■□□□□ 0.31
RBM38-201ENST00000342690 PET100P0DJ07 73 aa16.97■□□□□ 0.31
RBM38-201ENST00000342690 OPRK1P41145 380 aa16.97■□□□□ 0.31
RBM38-201ENST00000342690 RUNX1Q01196 453 aa16.97■□□□□ 0.31
RBM38-201ENST00000342690 ZNF343Q6P1L6 599 aa16.97■□□□□ 0.31
RBM38-201ENST00000342690 PPP1R1CQ8WVI7 109 aa16.97■□□□□ 0.31
RBM38-201ENST00000342690 ASB13Q8WXK3 278 aa16.97■□□□□ 0.31
RBM38-201ENST00000342690 ZNF436Q9C0F3 470 aaPredicted RBP16.97■□□□□ 0.31
RBM38-201ENST00000342690 RPS10-NUDT3A0A1W2PQS6 291 aa16.96■□□□□ 0.31
RBM38-201ENST00000342690 MFSD2BA6NFX1 497 aa16.96■□□□□ 0.31
RBM38-201ENST00000342690 C15orf62A8K5M9 175 aa16.96■□□□□ 0.31
RBM38-201ENST00000342690 K7EIM0 57 aa16.96■□□□□ 0.31
RBM38-201ENST00000342690 TSC22D2O75157 780 aa16.96■□□□□ 0.31
RBM38-201ENST00000342690 MT-CO2P00403 227 aa16.96■□□□□ 0.31
RBM38-201ENST00000342690 MYCNOSP40205 109 aa16.96■□□□□ 0.31
RBM38-201ENST00000342690 OR4C12Q96R67 309 aa16.96■□□□□ 0.31
RBM38-201ENST00000342690 S4R3C0 116 aa16.96■□□□□ 0.31
RBM38-201ENST00000342690 TRRAPQ9Y4A5 3859 aa16.96■□□□□ 0.3
RBM38-201ENST00000342690 IGHV3-21A0A0B4J1V1 117 aa16.95■□□□□ 0.3
RBM38-201ENST00000342690 I3L2K1 104 aa16.95■□□□□ 0.3
RBM38-201ENST00000342690 CCL24O00175 119 aa16.95■□□□□ 0.3
RBM38-201ENST00000342690 DEDDO75618 318 aa16.95■□□□□ 0.3
RBM38-201ENST00000342690 GIPP09681 153 aaPredicted RBP16.95■□□□□ 0.3
RBM38-201ENST00000342690 BCAP31P51572 246 aa16.95■□□□□ 0.3
RBM38-201ENST00000342690 PAX9P55771 341 aa16.95■□□□□ 0.3
RBM38-201ENST00000342690 TMEM170AQ8WVE7 144 aa16.95■□□□□ 0.3
RBM38-201ENST00000342690 C21orf62Q9NYP8 219 aa16.95■□□□□ 0.3
RBM38-201ENST00000342690 ANKRD34BA5PLL1 514 aa16.94■□□□□ 0.3
RBM38-201ENST00000342690 TMEM50AO95807 157 aa16.94■□□□□ 0.3
RBM38-201ENST00000342690 IGHV3-23P01764 117 aa16.94■□□□□ 0.3
RBM38-201ENST00000342690 ETFRF1Q6IPR1 90 aa16.94■□□□□ 0.3
RBM38-201ENST00000342690 OR11H1Q8NG94 326 aa16.94■□□□□ 0.3
RBM38-201ENST00000342690 ZNF502Q8TBZ5 544 aa16.94■□□□□ 0.3
RBM38-201ENST00000342690 SCARB1Q8WTV0 552 aa16.94■□□□□ 0.3
RBM38-201ENST00000342690 WDR89Q96FK6 387 aaPredicted RBP16.94■□□□□ 0.3
RBM38-201ENST00000342690 PEF1Q9UBV8 284 aaKnown RBP16.94■□□□□ 0.3
RBM38-201ENST00000342690 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.93■□□□□ 0.3
RBM38-201ENST00000342690 CAV2P51636 162 aa16.93■□□□□ 0.3
RBM38-201ENST00000342690 MFAP4P55083 255 aa16.93■□□□□ 0.3
RBM38-201ENST00000342690 RAP2BP61225 183 aa16.93■□□□□ 0.3
RBM38-201ENST00000342690 FHL3Q13643 280 aa16.93■□□□□ 0.3
RBM38-201ENST00000342690 ACSM6Q6P461 480 aa16.93■□□□□ 0.3
RBM38-201ENST00000342690 LINC00482Q8N8I6 264 aa16.93■□□□□ 0.3
RBM38-201ENST00000342690 DPF1Q92782 380 aa16.93■□□□□ 0.3
RBM38-201ENST00000342690 CCDC140Q96MF4 163 aa16.93■□□□□ 0.3
RBM38-201ENST00000342690 C11orf1Q9H5F2 150 aa16.93■□□□□ 0.3
RBM38-201ENST00000342690 RANGRFQ9HD47 186 aaPredicted RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms