RNA–Protein interactions for RNA: ENST00000342294.4

TRA2B-202, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best) BASIC

Gene TRA2B, Length 288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-202ENST00000342294 ERVK-16P61578 105 aa12.04□□□□□ -0.48
TRA2B-202ENST00000342294 RCN1Q15293 331 aa12.04□□□□□ -0.48
TRA2B-202ENST00000342294 BEST4Q8NFU0 473 aa12.04□□□□□ -0.48
TRA2B-202ENST00000342294 MISP3Q96FF7 219 aa12.04□□□□□ -0.48
TRA2B-202ENST00000342294 TMEM56Q96MV1 263 aa12.04□□□□□ -0.48
TRA2B-202ENST00000342294 MGLLQ99685 303 aa12.04□□□□□ -0.48
TRA2B-202ENST00000342294 SCN3BQ9NY72 215 aa12.04□□□□□ -0.48
TRA2B-202ENST00000342294 DBX1A6NMT0 343 aa12.03□□□□□ -0.48
TRA2B-202ENST00000342294 GNG7O60262 68 aa12.03□□□□□ -0.48
TRA2B-202ENST00000342294 MT-CO2P00403 227 aa12.03□□□□□ -0.48
TRA2B-202ENST00000342294 ZNF688P0C7X2 276 aa12.03□□□□□ -0.48
TRA2B-202ENST00000342294 ARPC4P59998 168 aa12.03□□□□□ -0.48
TRA2B-202ENST00000342294 ACTL10Q5JWF8 245 aa12.03□□□□□ -0.48
TRA2B-202ENST00000342294 AADACL3Q5VUY0 350 aa12.03□□□□□ -0.48
TRA2B-202ENST00000342294 DUSP21Q9H596 190 aa12.03□□□□□ -0.48
TRA2B-202ENST00000342294 SCRT2Q9NQ03 307 aa12.03□□□□□ -0.48
TRA2B-202ENST00000342294 CASQ2O14958 399 aaPredicted RBP12.02□□□□□ -0.49
TRA2B-202ENST00000342294 SNAPC5O75971 98 aa12.02□□□□□ -0.49
TRA2B-202ENST00000342294 KRASP01116 189 aa12.02□□□□□ -0.49
TRA2B-202ENST00000342294 F2RP25116 425 aa12.02□□□□□ -0.49
TRA2B-202ENST00000342294 FXYD4P59646 89 aa12.02□□□□□ -0.49
TRA2B-202ENST00000342294 ZNF600Q6ZNG1 722 aa12.02□□□□□ -0.49
TRA2B-202ENST00000342294 ZNF114Q8NC26 417 aa12.02□□□□□ -0.49
TRA2B-202ENST00000342294 DCANP1Q8TF63 244 aa12.02□□□□□ -0.49
TRA2B-202ENST00000342294 CCDC90BQ9GZT6 254 aa12.02□□□□□ -0.49
TRA2B-202ENST00000342294 TMEM231Q9H6L2 316 aa12.02□□□□□ -0.49
TRA2B-202ENST00000342294 PRNDQ9UKY0 176 aa12.02□□□□□ -0.49
TRA2B-202ENST00000342294 PUS1Q9Y606 427 aaKnown RBP eCLIP12.02□□□□□ -0.49
TRA2B-202ENST00000342294 A0A1B0GU03 582 aa12.01□□□□□ -0.49
TRA2B-202ENST00000342294 SPART-AS1P0CW21 52 aa12.01□□□□□ -0.49
TRA2B-202ENST00000342294 GNRHRP30968 328 aa12.01□□□□□ -0.49
TRA2B-202ENST00000342294 LPAR6P43657 344 aa12.01□□□□□ -0.49
TRA2B-202ENST00000342294 ZNF367Q7RTV3 350 aa12.01□□□□□ -0.49
TRA2B-202ENST00000342294 HOGA1Q86XE5 327 aa12.01□□□□□ -0.49
TRA2B-202ENST00000342294 STXBP6Q8NFX7 210 aa12.01□□□□□ -0.49
TRA2B-202ENST00000342294 FCAMRQ8WWV6 532 aa12.01□□□□□ -0.49
TRA2B-202ENST00000342294 RAB40CQ96S21 281 aa12.01□□□□□ -0.49
TRA2B-202ENST00000342294 FKBP11Q9NYL4 201 aa12.01□□□□□ -0.49
TRA2B-202ENST00000342294 NACAE9PAV3 2078 aa12□□□□□ -0.49
TRA2B-202ENST00000342294 SCGNO76038 276 aa12□□□□□ -0.49
TRA2B-202ENST00000342294 MYL9P24844 172 aa12□□□□□ -0.49
TRA2B-202ENST00000342294 G6PCP35575 357 aa12□□□□□ -0.49
TRA2B-202ENST00000342294 NEU1Q99519 415 aa12□□□□□ -0.49
TRA2B-202ENST00000342294 RGS10O43665 173 aa11.99□□□□□ -0.49
TRA2B-202ENST00000342294 PGLYRP1O75594 196 aaPredicted RBP11.99□□□□□ -0.49
TRA2B-202ENST00000342294 NPPCP23582 126 aa11.99□□□□□ -0.49
TRA2B-202ENST00000342294 OGFRL1Q5TC84 451 aaPredicted RBP11.99□□□□□ -0.49
TRA2B-202ENST00000342294 ZNF705AQ6ZN79 300 aaPredicted RBP11.99□□□□□ -0.49
TRA2B-202ENST00000342294 TMEM17Q86X19 198 aa11.99□□□□□ -0.49
TRA2B-202ENST00000342294 C1QTNF4Q9BXJ3 329 aa11.99□□□□□ -0.49
TRA2B-202ENST00000342294 XCL2Q9UBD3 114 aa11.99□□□□□ -0.49
TRA2B-202ENST00000342294 TPRKBQ9Y3C4 175 aa11.99□□□□□ -0.49
TRA2B-202ENST00000342294 APOBP04114 4563 aaKnown RBP11.99□□□□□ -0.49
TRA2B-202ENST00000342294 TRDV1A0A1B0GX56 115 aa11.98□□□□□ -0.49
TRA2B-202ENST00000342294 A0A1W2PS18 150 aa11.98□□□□□ -0.49
TRA2B-202ENST00000342294 SMIM30A4D0T7 59 aa11.98□□□□□ -0.49
TRA2B-202ENST00000342294 ZNF705FA8MVS1 300 aaPredicted RBP11.98□□□□□ -0.49
TRA2B-202ENST00000342294 TMEM50AO95807 157 aa11.98□□□□□ -0.49
TRA2B-202ENST00000342294 RLN1P04808 185 aa11.98□□□□□ -0.49
TRA2B-202ENST00000342294 ZNF705DP0CH99 300 aaPredicted RBP11.98□□□□□ -0.49
TRA2B-202ENST00000342294 ZNF705BP0CI00 300 aaPredicted RBP11.98□□□□□ -0.49
TRA2B-202ENST00000342294 CRYBB3P26998 211 aa11.98□□□□□ -0.49
TRA2B-202ENST00000342294 P2RY1P47900 373 aa11.98□□□□□ -0.49
TRA2B-202ENST00000342294 NPBWR1P48145 328 aa11.98□□□□□ -0.49
TRA2B-202ENST00000342294 TPRA1Q86W33 373 aa11.98□□□□□ -0.49
TRA2B-202ENST00000342294 PINX1Q96BK5 328 aaKnown RBP11.98□□□□□ -0.49
TRA2B-202ENST00000342294 MOB3AQ96BX8 217 aa11.98□□□□□ -0.49
TRA2B-202ENST00000342294 DMBT1Q9UGM3 2413 aaPredicted RBP11.98□□□□□ -0.49
TRA2B-202ENST00000342294 TMEM189A5PLL7 270 aa11.97□□□□□ -0.49
TRA2B-202ENST00000342294 FAM3BP58499 235 aaPredicted RBP11.97□□□□□ -0.49
TRA2B-202ENST00000342294 PRSS48Q7RTY5 328 aa11.97□□□□□ -0.49
TRA2B-202ENST00000342294 BORCS5Q969J3 196 aa11.97□□□□□ -0.49
TRA2B-202ENST00000342294 TSC22D3Q99576 134 aa11.97□□□□□ -0.49
TRA2B-202ENST00000342294 NOTOA8MTQ0 251 aa11.96□□□□□ -0.49
TRA2B-202ENST00000342294 FGF9P31371 208 aaPredicted RBP11.96□□□□□ -0.49
TRA2B-202ENST00000342294 NUTF2P61970 127 aaKnown RBP11.96□□□□□ -0.49
TRA2B-202ENST00000342294 PRCDQ00LT1 54 aa11.96□□□□□ -0.49
TRA2B-202ENST00000342294 KCTD21Q4G0X4 260 aa11.96□□□□□ -0.49
TRA2B-202ENST00000342294 OR5AP2Q8NGF4 316 aa11.96□□□□□ -0.49
TRA2B-202ENST00000342294 RNF167Q9H6Y7 350 aa11.96□□□□□ -0.49
TRA2B-202ENST00000342294 NDUFB11Q9NX14 153 aa11.96□□□□□ -0.49
TRA2B-202ENST00000342294 DKK2Q9UBU2 259 aa11.96□□□□□ -0.49
TRA2B-202ENST00000342294 SMIM9A6NGZ8 99 aa11.95□□□□□ -0.5
TRA2B-202ENST00000342294 H3BMM0 161 aa11.95□□□□□ -0.5
TRA2B-202ENST00000342294 PPP5CP53041 499 aa11.95□□□□□ -0.5
TRA2B-202ENST00000342294 EMP1P54849 157 aa11.95□□□□□ -0.5
TRA2B-202ENST00000342294 OXA1LQ15070 435 aa11.95□□□□□ -0.5
TRA2B-202ENST00000342294 PSMG4Q5JS54 123 aa11.95□□□□□ -0.5
TRA2B-202ENST00000342294 C22orf42Q6IC83 251 aa11.95□□□□□ -0.5
TRA2B-202ENST00000342294 DHRS11Q6UWP2 260 aa11.95□□□□□ -0.5
TRA2B-202ENST00000342294 C6orf223Q8N319 242 aa11.95□□□□□ -0.5
TRA2B-202ENST00000342294 METTL26Q96S19 204 aa11.95□□□□□ -0.5
TRA2B-202ENST00000342294 NIPSNAP3BQ9BS92 247 aa11.95□□□□□ -0.5
TRA2B-202ENST00000342294 RHBDL2Q9NX52 303 aa11.95□□□□□ -0.5
TRA2B-202ENST00000342294 U3KQE9 123 aa11.95□□□□□ -0.5
TRA2B-202ENST00000342294 TRAV18A0A075B6X5 111 aa11.94□□□□□ -0.5
TRA2B-202ENST00000342294 HELTA6NFD8 242 aa11.94□□□□□ -0.5
TRA2B-202ENST00000342294 FCER2P06734 321 aa11.94□□□□□ -0.5
TRA2B-202ENST00000342294 HERV-K104P61576 105 aa11.94□□□□□ -0.5
TRA2B-202ENST00000342294 DHRS2Q13268 280 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms