RNA–Protein interactions for RNA: ENST00000341697.7

SEMA6C-201, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 5,262 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-201ENST00000341697 MAP1LC3CQ9BXW4 147 aa16.19■□□□□ 0.18
SEMA6C-201ENST00000341697 SLC25A16P16260 332 aa16.18■□□□□ 0.18
SEMA6C-201ENST00000341697 FOXI3A8MTJ6 420 aaPredicted RBP16.18■□□□□ 0.18
SEMA6C-201ENST00000341697 LY6HO94772 140 aa16.18■□□□□ 0.18
SEMA6C-201ENST00000341697 TMEM155Q4W5P6 130 aa16.18■□□□□ 0.18
SEMA6C-201ENST00000341697 TPTE2P1Q5T6R2 138 aa16.18■□□□□ 0.18
SEMA6C-201ENST00000341697 RNF126Q9BV68 326 aa16.18■□□□□ 0.18
SEMA6C-201ENST00000341697 FER1L5A0AVI2 2057 aa16.18■□□□□ 0.18
SEMA6C-201ENST00000341697 IGHV3OR16-8A0A075B7F1 116 aa16.18■□□□□ 0.18
SEMA6C-201ENST00000341697 LY6G6FQ5SQ64 297 aa16.18■□□□□ 0.18
SEMA6C-201ENST00000341697 PUSL1Q8N0Z8 303 aaKnown RBP16.18■□□□□ 0.18
SEMA6C-201ENST00000341697 MYOZ3Q8TDC0 251 aa16.18■□□□□ 0.18
SEMA6C-201ENST00000341697 COQ2Q96H96 371 aa16.18■□□□□ 0.18
SEMA6C-201ENST00000341697 CGAP01215 116 aa16.18■□□□□ 0.18
SEMA6C-201ENST00000341697 HNRNPA3P51991 378 aaKnown RBP16.18■□□□□ 0.18
SEMA6C-201ENST00000341697 RHOGP84095 191 aa16.18■□□□□ 0.18
SEMA6C-201ENST00000341697 KLRD1Q13241 179 aa16.18■□□□□ 0.18
SEMA6C-201ENST00000341697 TMEM183BQ1AE95 376 aa16.18■□□□□ 0.18
SEMA6C-201ENST00000341697 SMUG1Q53HV7 270 aa16.18■□□□□ 0.18
SEMA6C-201ENST00000341697 TMEM97Q5BJF2 176 aa16.18■□□□□ 0.18
SEMA6C-201ENST00000341697 ASCL4Q6XD76 172 aa16.18■□□□□ 0.18
SEMA6C-201ENST00000341697 GATA2P23769 480 aaPredicted RBP16.17■□□□□ 0.18
SEMA6C-201ENST00000341697 MOB4Q9Y3A3 225 aa16.17■□□□□ 0.18
SEMA6C-201ENST00000341697 IGHV1-3A0A0C4DH29 117 aa16.17■□□□□ 0.18
SEMA6C-201ENST00000341697 IFITM2Q01629 132 aa16.17■□□□□ 0.18
SEMA6C-201ENST00000341697 ZNF506Q5JVG8 444 aa16.17■□□□□ 0.18
SEMA6C-201ENST00000341697 PEMTQ9UBM1 199 aa16.17■□□□□ 0.18
SEMA6C-201ENST00000341697 CD99P14209 185 aa16.17■□□□□ 0.18
SEMA6C-201ENST00000341697 SMAGPQ0VAQ4 97 aa16.17■□□□□ 0.18
SEMA6C-201ENST00000341697 PGLYRP4Q96LB8 373 aa16.17■□□□□ 0.18
SEMA6C-201ENST00000341697 BPESC1Q9GZL8 116 aa16.17■□□□□ 0.18
SEMA6C-201ENST00000341697 FAM215AQ9Y5M1 114 aa16.17■□□□□ 0.18
SEMA6C-201ENST00000341697 A0A1W2PRX2 142 aa16.17■□□□□ 0.18
SEMA6C-201ENST00000341697 SNCGO76070 127 aa16.17■□□□□ 0.18
SEMA6C-201ENST00000341697 IGKV3-20P01619 116 aa16.17■□□□□ 0.18
SEMA6C-201ENST00000341697 WT1P19544 449 aaPredicted RBP16.17■□□□□ 0.18
SEMA6C-201ENST00000341697 NUTF2P61970 127 aaKnown RBP16.17■□□□□ 0.18
SEMA6C-201ENST00000341697 CD69Q07108 199 aa16.17■□□□□ 0.18
SEMA6C-201ENST00000341697 HLA-DRB1P01911 266 aa16.16■□□□□ 0.18
SEMA6C-201ENST00000341697 SLC25A48Q6ZT89 311 aaKnown RBP16.16■□□□□ 0.18
SEMA6C-201ENST00000341697 HSPB8Q9UJY1 196 aa16.16■□□□□ 0.18
SEMA6C-201ENST00000341697 BDP1A6H8Y1 2624 aa16.16■□□□□ 0.18
SEMA6C-201ENST00000341697 CD81P60033 236 aa16.16■□□□□ 0.18
SEMA6C-201ENST00000341697 PVRIGQ6DKI7 326 aa16.16■□□□□ 0.18
SEMA6C-201ENST00000341697 GCGP01275 180 aa16.16■□□□□ 0.18
SEMA6C-201ENST00000341697 CYB5R2Q6BCY4 276 aa16.16■□□□□ 0.18
SEMA6C-201ENST00000341697 RNF5Q99942 180 aa16.16■□□□□ 0.18
SEMA6C-201ENST00000341697 CKS2P33552 79 aa16.16■□□□□ 0.18
SEMA6C-201ENST00000341697 EP400Q96L91 3159 aa16.16■□□□□ 0.18
SEMA6C-201ENST00000341697 FAM159AQ6UWV7 190 aa16.15■□□□□ 0.18
SEMA6C-201ENST00000341697 LYPD2Q6UXB3 125 aa16.15■□□□□ 0.18
SEMA6C-201ENST00000341697 KIF26AQ9ULI4 1882 aaPredicted RBP16.15■□□□□ 0.18
SEMA6C-201ENST00000341697 HLA-DQA1P01909 254 aa16.15■□□□□ 0.18
SEMA6C-201ENST00000341697 MYOD1P15172 320 aa16.15■□□□□ 0.18
SEMA6C-201ENST00000341697 AGAP20933 346 aa16.15■□□□□ 0.18
SEMA6C-201ENST00000341697 CENPWQ5EE01 88 aa16.15■□□□□ 0.18
SEMA6C-201ENST00000341697 FAM209BQ5JX69 171 aa16.15■□□□□ 0.18
SEMA6C-201ENST00000341697 OR4D5Q8NGN0 318 aa16.15■□□□□ 0.18
SEMA6C-201ENST00000341697 HERVK_113P61574 105 aa16.15■□□□□ 0.18
SEMA6C-201ENST00000341697 Q1RN00 199 aa16.15■□□□□ 0.18
SEMA6C-201ENST00000341697 C2orf16Q68DN1 1984 aa16.15■□□□□ 0.18
SEMA6C-201ENST00000341697 LOC389332A0A1B0GUA5 103 aa16.14■□□□□ 0.17
SEMA6C-201ENST00000341697 NDUFS8O00217 210 aa16.14■□□□□ 0.17
SEMA6C-201ENST00000341697 MIR17HGQ75NE6 70 aa16.14■□□□□ 0.17
SEMA6C-201ENST00000341697 ZNF257Q9Y2Q1 563 aa16.14■□□□□ 0.17
SEMA6C-201ENST00000341697 HEATR5AQ86XA9 2040 aa16.14■□□□□ 0.17
SEMA6C-201ENST00000341697 PCNX1Q96RV3 2341 aa16.14■□□□□ 0.17
SEMA6C-201ENST00000341697 A6NNC1 897 aa16.14■□□□□ 0.17
SEMA6C-201ENST00000341697 PRSS8Q16651 343 aa16.14■□□□□ 0.17
SEMA6C-201ENST00000341697 USF3Q68DE3 2245 aa16.14■□□□□ 0.17
SEMA6C-201ENST00000341697 MDKP21741 143 aaPredicted RBP16.14■□□□□ 0.17
SEMA6C-201ENST00000341697 ZNF600Q6ZNG1 722 aa16.14■□□□□ 0.17
SEMA6C-201ENST00000341697 GSX1Q9H4S2 264 aaPredicted RBP16.13■□□□□ 0.17
SEMA6C-201ENST00000341697 ZNF343Q6P1L6 599 aa16.13■□□□□ 0.17
SEMA6C-201ENST00000341697 SAMD13Q5VXD3 122 aa16.13■□□□□ 0.17
SEMA6C-201ENST00000341697 Q6ZS49 121 aa16.13■□□□□ 0.17
SEMA6C-201ENST00000341697 TP53BP1Q12888 1972 aaPredicted RBP16.13■□□□□ 0.17
SEMA6C-201ENST00000341697 TRAV20A0A0B4J274 112 aa16.13■□□□□ 0.17
SEMA6C-201ENST00000341697 CD55P08174 381 aa16.13■□□□□ 0.17
SEMA6C-201ENST00000341697 NPFFO15130 113 aa16.12■□□□□ 0.17
SEMA6C-201ENST00000341697 RNF125Q96EQ8 232 aa16.12■□□□□ 0.17
SEMA6C-201ENST00000341697 TRAV41A0A0B4J266 112 aa16.12■□□□□ 0.17
SEMA6C-201ENST00000341697 RPL29P47914 159 aaKnown RBP16.12■□□□□ 0.17
SEMA6C-201ENST00000341697 MEOX2P50222 304 aa16.12■□□□□ 0.17
SEMA6C-201ENST00000341697 OR8A1Q8NGG7 326 aa16.12■□□□□ 0.17
SEMA6C-201ENST00000341697 PACRGQ96M98 296 aaPredicted RBP16.12■□□□□ 0.17
SEMA6C-201ENST00000341697 ZNF581Q9P0T4 197 aa16.12■□□□□ 0.17
SEMA6C-201ENST00000341697 CDC42EP3Q9UKI2 254 aa16.12■□□□□ 0.17
SEMA6C-201ENST00000341697 H0YIZ8 118 aa16.12■□□□□ 0.17
SEMA6C-201ENST00000341697 TCRBV4S1A1TA0A5B7 111 aa16.12■□□□□ 0.17
SEMA6C-201ENST00000341697 BUB1B-PAK6H3BSN5 160 aa16.12■□□□□ 0.17
SEMA6C-201ENST00000341697 FAM53AQ6NSI3 398 aaPredicted RBP16.12■□□□□ 0.17
SEMA6C-201ENST00000341697 IGFL2Q6UWQ7 119 aa16.12■□□□□ 0.17
SEMA6C-201ENST00000341697 BRD3OSQ6XYD6 125 aa16.12■□□□□ 0.17
SEMA6C-201ENST00000341697 GPR82Q96P67 336 aa16.12■□□□□ 0.17
SEMA6C-201ENST00000341697 TRAV34A0A0B4J273 112 aa16.11■□□□□ 0.17
SEMA6C-201ENST00000341697 NPIPB6E9PJ23 425 aa16.11■□□□□ 0.17
SEMA6C-201ENST00000341697 PEX7O00628 323 aa16.11■□□□□ 0.17
SEMA6C-201ENST00000341697 VENTXO95231 258 aa16.11■□□□□ 0.17
SEMA6C-201ENST00000341697 TRGC1P0CF51 173 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 123.7 ms