RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 PRR33A8MZF0 331 aa11.79□□□□□ -0.52
CPSF7-201ENST00000340437 LGALS4P56470 323 aa11.79□□□□□ -0.52
CPSF7-201ENST00000340437 LINC00310P59036 64 aa11.79□□□□□ -0.52
CPSF7-201ENST00000340437 IBA57Q5T440 356 aaKnown RBP11.79□□□□□ -0.52
CPSF7-201ENST00000340437 COMMD5Q9GZQ3 224 aa11.79□□□□□ -0.52
CPSF7-201ENST00000340437 TECRQ9NZ01 308 aaKnown RBP11.79□□□□□ -0.52
CPSF7-201ENST00000340437 CSPG4Q6UVK1 2322 aa11.78□□□□□ -0.52
CPSF7-201ENST00000340437 IGHV3-72A0A0B4J1Y9 119 aa11.78□□□□□ -0.52
CPSF7-201ENST00000340437 PRSS46E5RG02 174 aa11.78□□□□□ -0.52
CPSF7-201ENST00000340437 ENSAO43768 121 aaKnown RBP11.78□□□□□ -0.52
CPSF7-201ENST00000340437 TDGF1P3P51864 188 aa11.78□□□□□ -0.52
CPSF7-201ENST00000340437 RANP62826 216 aaKnown RBP11.78□□□□□ -0.52
CPSF7-201ENST00000340437 MZT1Q08AG7 82 aa11.78□□□□□ -0.52
CPSF7-201ENST00000340437 LBHQ53QV2 105 aaPredicted RBP11.78□□□□□ -0.52
CPSF7-201ENST00000340437 FAM168AQ92567 244 aa11.78□□□□□ -0.52
CPSF7-201ENST00000340437 ZNF355PQ9NSJ1 428 aa11.78□□□□□ -0.52
CPSF7-201ENST00000340437 ZNF586Q9NXT0 402 aa11.78□□□□□ -0.52
CPSF7-201ENST00000340437 LSM4Q9Y4Z0 139 aaKnown RBP11.78□□□□□ -0.52
CPSF7-201ENST00000340437 MALRD1Q5VYJ5 2156 aa11.78□□□□□ -0.52
CPSF7-201ENST00000340437 ZFYVE26Q68DK2 2539 aa11.78□□□□□ -0.52
CPSF7-201ENST00000340437 FTH1P19P0C7X4 201 aa11.78□□□□□ -0.52
CPSF7-201ENST00000340437 CCL3L1P16619 93 aa11.78□□□□□ -0.52
CPSF7-201ENST00000340437 RAB7AP51149 207 aa11.78□□□□□ -0.52
CPSF7-201ENST00000340437 SSBP2P81877 361 aaPredicted RBP11.78□□□□□ -0.52
CPSF7-201ENST00000340437 FAM27E3Q08E93 113 aa11.78□□□□□ -0.52
CPSF7-201ENST00000340437 TMEM183BQ1AE95 376 aa11.78□□□□□ -0.52
CPSF7-201ENST00000340437 TXN2Q99757 166 aa11.78□□□□□ -0.52
CPSF7-201ENST00000340437 SSBP4Q9BWG4 385 aaPredicted RBP11.78□□□□□ -0.52
CPSF7-201ENST00000340437 KBTBD11-OT1A0A1B0GTJ5 212 aa11.78□□□□□ -0.52
CPSF7-201ENST00000340437 SELENOVP59797 346 aa11.78□□□□□ -0.52
CPSF7-201ENST00000340437 V9GYV3 84 aa11.78□□□□□ -0.52
CPSF7-201ENST00000340437 SETD2Q9BYW2 2564 aaPredicted RBP11.77□□□□□ -0.52
CPSF7-201ENST00000340437 C19orf67A6NJJ6 358 aa11.77□□□□□ -0.53
CPSF7-201ENST00000340437 GGTLC3B5MD39 225 aa11.77□□□□□ -0.53
CPSF7-201ENST00000340437 LINC00869P0C866 280 aa11.77□□□□□ -0.53
CPSF7-201ENST00000340437 YPEL3P61236 119 aaPredicted RBP11.77□□□□□ -0.53
CPSF7-201ENST00000340437 TMEM68Q96MH6 324 aa11.77□□□□□ -0.53
CPSF7-201ENST00000340437 TRAV17A0A0B4J275 112 aa11.77□□□□□ -0.53
CPSF7-201ENST00000340437 USF1P22415 310 aaPredicted RBP11.77□□□□□ -0.53
CPSF7-201ENST00000340437 RTL8BQ17RB0 113 aa11.77□□□□□ -0.53
CPSF7-201ENST00000340437 LCN12Q6JVE5 192 aa11.77□□□□□ -0.53
CPSF7-201ENST00000340437 HARBI1Q96MB7 349 aa11.77□□□□□ -0.53
CPSF7-201ENST00000340437 ZNF331Q9NQX6 463 aaPredicted RBP11.77□□□□□ -0.53
CPSF7-201ENST00000340437 ZNF891A8MT65 544 aaPredicted RBP11.76□□□□□ -0.53
CPSF7-201ENST00000340437 TNFSF13O75888 250 aa11.76□□□□□ -0.53
CPSF7-201ENST00000340437 SAA1P0DJI8 122 aaPredicted RBP11.76□□□□□ -0.53
CPSF7-201ENST00000340437 ORM2P19652 201 aa11.76□□□□□ -0.53
CPSF7-201ENST00000340437 PAFAH1B2P68402 229 aa11.76□□□□□ -0.53
CPSF7-201ENST00000340437 STUMQ69YW2 141 aa11.76□□□□□ -0.53
CPSF7-201ENST00000340437 NRN1Q9NPD7 142 aa11.76□□□□□ -0.53
CPSF7-201ENST00000340437 RNF7Q9UBF6 113 aa11.76□□□□□ -0.53
CPSF7-201ENST00000340437 TEX50A0A1B0GTY4 177 aa11.76□□□□□ -0.53
CPSF7-201ENST00000340437 ZNF883P0CG24 379 aa11.76□□□□□ -0.53
CPSF7-201ENST00000340437 MFAP2P55001 183 aa11.76□□□□□ -0.53
CPSF7-201ENST00000340437 DLX1P56177 255 aa11.76□□□□□ -0.53
CPSF7-201ENST00000340437 GNG5P63218 68 aa11.76□□□□□ -0.53
CPSF7-201ENST00000340437 TPTE2P1Q5T6R2 138 aa11.76□□□□□ -0.53
CPSF7-201ENST00000340437 OR52E5Q8NH55 327 aa11.76□□□□□ -0.53
CPSF7-201ENST00000340437 NEU1Q99519 415 aa11.76□□□□□ -0.53
CPSF7-201ENST00000340437 RPLP1P05386 114 aaKnown RBP11.76□□□□□ -0.53
CPSF7-201ENST00000340437 CD24P25063 80 aa11.76□□□□□ -0.53
CPSF7-201ENST00000340437 BRS3P32247 399 aa11.76□□□□□ -0.53
CPSF7-201ENST00000340437 MMDQ15546 238 aa11.76□□□□□ -0.53
CPSF7-201ENST00000340437 NOTCH2Q04721 2471 aa11.75□□□□□ -0.53
CPSF7-201ENST00000340437 SPATA45Q537H7 98 aa11.75□□□□□ -0.53
CPSF7-201ENST00000340437 MBNL2Q5VZF2 373 aaKnown RBP11.75□□□□□ -0.53
CPSF7-201ENST00000340437 C22orf34Q6ZV56 151 aa11.75□□□□□ -0.53
CPSF7-201ENST00000340437 TXNDC17Q9BRA2 123 aa11.75□□□□□ -0.53
CPSF7-201ENST00000340437 MRPL20Q9BYC9 149 aaKnown RBP11.75□□□□□ -0.53
CPSF7-201ENST00000340437 PRO3102Q9H379 93 aa11.75□□□□□ -0.53
CPSF7-201ENST00000340437 TMEM167BQ9NRX6 74 aa11.75□□□□□ -0.53
CPSF7-201ENST00000340437 TMEM14BQ9NUH8 114 aa11.75□□□□□ -0.53
CPSF7-201ENST00000340437 SLC25A15Q9Y619 301 aa11.75□□□□□ -0.53
CPSF7-201ENST00000340437 H0Y8G0 127 aa11.75□□□□□ -0.53
CPSF7-201ENST00000340437 COX7A2P2O60397 106 aa11.75□□□□□ -0.53
CPSF7-201ENST00000340437 NPSP0C0P6 89 aa11.75□□□□□ -0.53
CPSF7-201ENST00000340437 CT45A6P0DMU7 189 aa11.75□□□□□ -0.53
CPSF7-201ENST00000340437 CT45A5P0DMU8 189 aa11.75□□□□□ -0.53
CPSF7-201ENST00000340437 CT45A7P0DMV0 189 aa11.75□□□□□ -0.53
CPSF7-201ENST00000340437 PAX1P15863 534 aa11.75□□□□□ -0.53
CPSF7-201ENST00000340437 KIR2DS2P43631 304 aa11.75□□□□□ -0.53
CPSF7-201ENST00000340437 DIAPH2-AS1Q14236 149 aa11.75□□□□□ -0.53
CPSF7-201ENST00000340437 MAJINQ3KP22 176 aa11.75□□□□□ -0.53
CPSF7-201ENST00000340437 HCP5Q6MZN7 132 aa11.75□□□□□ -0.53
CPSF7-201ENST00000340437 C19orf35Q6ZS72 473 aa11.75□□□□□ -0.53
CPSF7-201ENST00000340437 NPIPB3Q92617 1050 aa11.75□□□□□ -0.53
CPSF7-201ENST00000340437 ZZEF1O43149 2961 aa11.75□□□□□ -0.53
CPSF7-201ENST00000340437 TAS2R45P59539 299 aa11.75□□□□□ -0.53
CPSF7-201ENST00000340437 ZNF474Q6S9Z5 364 aaPredicted RBP11.75□□□□□ -0.53
CPSF7-201ENST00000340437 RBMXL3Q8N7X1 1067 aaKnown RBP11.75□□□□□ -0.53
CPSF7-201ENST00000340437 CCL17Q92583 94 aa11.75□□□□□ -0.53
CPSF7-201ENST00000340437 SLC35E1Q96K37 410 aa11.75□□□□□ -0.53
CPSF7-201ENST00000340437 PLSCR4Q9NRQ2 329 aa11.75□□□□□ -0.53
CPSF7-201ENST00000340437 PRNDQ9UKY0 176 aa11.75□□□□□ -0.53
CPSF7-201ENST00000340437 CENPEQ02224 2701 aa11.75□□□□□ -0.53
CPSF7-201ENST00000340437 E7EUB6 86 aa11.74□□□□□ -0.53
CPSF7-201ENST00000340437 F2RL2O00254 374 aa11.74□□□□□ -0.53
CPSF7-201ENST00000340437 RPL19P84098 196 aaKnown RBP11.74□□□□□ -0.53
CPSF7-201ENST00000340437 FOXC1Q12948 553 aa11.74□□□□□ -0.53
CPSF7-201ENST00000340437 DDB2Q92466 427 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms