RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 IGHV2-70P01814 119 aa8.21□□□□□ -1.09
RBFOX1-202ENST00000340209 GAMTQ14353 236 aa8.21□□□□□ -1.09
RBFOX1-202ENST00000340209 C9orf152Q5JTZ5 239 aa8.21□□□□□ -1.09
RBFOX1-202ENST00000340209 SCO2A0A1W2PP80 73 aa8.21□□□□□ -1.1
RBFOX1-202ENST00000340209 A0A1W2PPI3 338 aa8.21□□□□□ -1.1
RBFOX1-202ENST00000340209 USF1P22415 310 aaPredicted RBP8.21□□□□□ -1.1
RBFOX1-202ENST00000340209 HTR1DP28221 377 aa8.21□□□□□ -1.1
RBFOX1-202ENST00000340209 SPNS3Q6ZMD2 512 aa8.21□□□□□ -1.1
RBFOX1-202ENST00000340209 C22orf15Q8WYQ4 148 aa8.21□□□□□ -1.1
RBFOX1-202ENST00000340209 PERPQ96FX8 193 aa8.21□□□□□ -1.1
RBFOX1-202ENST00000340209 TNFRSF19Q9NS68 423 aa8.21□□□□□ -1.1
RBFOX1-202ENST00000340209 MIOXQ9UGB7 285 aa8.21□□□□□ -1.1
RBFOX1-202ENST00000340209 CSMD2Q7Z408 3487 aa8.21□□□□□ -1.1
RBFOX1-202ENST00000340209 MGST1P10620 155 aaKnown RBP8.21□□□□□ -1.1
RBFOX1-202ENST00000340209 RAB5AP20339 215 aa8.21□□□□□ -1.1
RBFOX1-202ENST00000340209 PRR31Q5SQ13 230 aa8.21□□□□□ -1.1
RBFOX1-202ENST00000340209 OR4X1Q8NH49 305 aa8.21□□□□□ -1.1
RBFOX1-202ENST00000340209 ELOVL1Q9BW60 279 aa8.21□□□□□ -1.1
RBFOX1-202ENST00000340209 ZANQ9Y493 2812 aa8.21□□□□□ -1.1
RBFOX1-202ENST00000340209 CELSR2Q9HCU4 2923 aa8.2□□□□□ -1.1
RBFOX1-202ENST00000340209 COLCA2A8K830 154 aa8.2□□□□□ -1.1
RBFOX1-202ENST00000340209 BUB1B-PAK6H3BSN5 160 aa8.2□□□□□ -1.1
RBFOX1-202ENST00000340209 NDUFA6P56556 154 aa8.2□□□□□ -1.1
RBFOX1-202ENST00000340209 PAX5Q02548 391 aa8.2□□□□□ -1.1
RBFOX1-202ENST00000340209 TMEM241Q24JQ0 296 aa8.2□□□□□ -1.1
RBFOX1-202ENST00000340209 FAM90A2PQ658T7 463 aa8.2□□□□□ -1.1
RBFOX1-202ENST00000340209 SSX8Q7RTT4 187 aa8.2□□□□□ -1.1
RBFOX1-202ENST00000340209 VSTM2AQ8TAG5 236 aa8.2□□□□□ -1.1
RBFOX1-202ENST00000340209 ITLN2Q8WWU7 325 aaPredicted RBP8.2□□□□□ -1.1
RBFOX1-202ENST00000340209 FKBP11Q9NYL4 201 aa8.2□□□□□ -1.1
RBFOX1-202ENST00000340209 VPS13CQ709C8 3753 aa8.2□□□□□ -1.1
RBFOX1-202ENST00000340209 H7BYZ3 331 aa8.2□□□□□ -1.1
RBFOX1-202ENST00000340209 PYYP10082 97 aa8.2□□□□□ -1.1
RBFOX1-202ENST00000340209 RNASE2P10153 161 aaKnown RBP8.2□□□□□ -1.1
RBFOX1-202ENST00000340209 RHOBP62745 196 aa8.2□□□□□ -1.1
RBFOX1-202ENST00000340209 PDPNQ86YL7 162 aa8.2□□□□□ -1.1
RBFOX1-202ENST00000340209 MAPK1IP1LQ8NDC0 245 aa8.2□□□□□ -1.1
RBFOX1-202ENST00000340209 OR5AN1Q8NGI8 311 aa8.2□□□□□ -1.1
RBFOX1-202ENST00000340209 MRPL36Q9P0J6 103 aaKnown RBP8.2□□□□□ -1.1
RBFOX1-202ENST00000340209 IGKV1OR2-108A0A075B7D4 117 aa8.2□□□□□ -1.1
RBFOX1-202ENST00000340209 CXCL1P09341 107 aa8.2□□□□□ -1.1
RBFOX1-202ENST00000340209 FAM3BP58499 235 aaPredicted RBP8.2□□□□□ -1.1
RBFOX1-202ENST00000340209 SSTP61278 116 aa8.2□□□□□ -1.1
RBFOX1-202ENST00000340209 LYZP61626 148 aa8.2□□□□□ -1.1
RBFOX1-202ENST00000340209 C10orf91Q5T1B1 145 aa8.2□□□□□ -1.1
RBFOX1-202ENST00000340209 DPPA3Q6W0C5 159 aa8.2□□□□□ -1.1
RBFOX1-202ENST00000340209 C16orf82Q7Z2V1 217 aa8.2□□□□□ -1.1
RBFOX1-202ENST00000340209 Q8WTZ3 238 aa8.2□□□□□ -1.1
RBFOX1-202ENST00000340209 SLC25A33Q9BSK2 321 aa8.2□□□□□ -1.1
RBFOX1-202ENST00000340209 SERTAD4Q9NUC0 356 aa8.2□□□□□ -1.1
RBFOX1-202ENST00000340209 TRBV23-1A0A0A0MS06 115 aa8.19□□□□□ -1.1
RBFOX1-202ENST00000340209 UBE2L3P68036 154 aaKnown RBP8.19□□□□□ -1.1
RBFOX1-202ENST00000340209 BSXQ3C1V8 233 aa8.19□□□□□ -1.1
RBFOX1-202ENST00000340209 PRR27Q6MZM9 219 aa8.19□□□□□ -1.1
RBFOX1-202ENST00000340209 OR5B3Q8NH48 314 aa8.19□□□□□ -1.1
RBFOX1-202ENST00000340209 MBD3L1Q8WWY6 194 aa8.19□□□□□ -1.1
RBFOX1-202ENST00000340209 FRZBQ92765 325 aa8.19□□□□□ -1.1
RBFOX1-202ENST00000340209 OR5B12Q96R08 314 aa8.19□□□□□ -1.1
RBFOX1-202ENST00000340209 P2RX4Q99571 388 aa8.19□□□□□ -1.1
RBFOX1-202ENST00000340209 PRORYQ9H606 182 aa8.19□□□□□ -1.1
RBFOX1-202ENST00000340209 MT-CO2P00403 227 aa8.19□□□□□ -1.1
RBFOX1-202ENST00000340209 ZFP36P26651 326 aaKnown RBP8.19□□□□□ -1.1
RBFOX1-202ENST00000340209 SUB1P53999 127 aaKnown RBP eCLIP8.19□□□□□ -1.1
RBFOX1-202ENST00000340209 SUMO1P63165 101 aaKnown RBP8.19□□□□□ -1.1
RBFOX1-202ENST00000340209 ZNF841Q6ZN19 808 aa8.19□□□□□ -1.1
RBFOX1-202ENST00000340209 VMO1Q7Z5L0 202 aa8.19□□□□□ -1.1
RBFOX1-202ENST00000340209 ZNF596Q8TC21 504 aa8.19□□□□□ -1.1
RBFOX1-202ENST00000340209 BET1LQ9NYM9 111 aa8.19□□□□□ -1.1
RBFOX1-202ENST00000340209 ACANP16112 2415 aa8.19□□□□□ -1.1
RBFOX1-202ENST00000340209 SLC35B1P78383 322 aa8.19□□□□□ -1.1
RBFOX1-202ENST00000340209 C11orf42Q8N5U0 333 aa8.19□□□□□ -1.1
RBFOX1-202ENST00000340209 FNDC4Q9H6D8 234 aaPredicted RBP8.19□□□□□ -1.1
RBFOX1-202ENST00000340209 LINC00527Q9UJ94 153 aa8.19□□□□□ -1.1
RBFOX1-202ENST00000340209 TIMM9Q9Y5J7 89 aa8.19□□□□□ -1.1
RBFOX1-202ENST00000340209 MTORP42345 2549 aa8.19□□□□□ -1.1
RBFOX1-202ENST00000340209 MC5RP33032 325 aa8.19□□□□□ -1.1
RBFOX1-202ENST00000340209 LDLRAD2Q5SZI1 272 aa8.19□□□□□ -1.1
RBFOX1-202ENST00000340209 MORN5Q5VZ52 161 aa8.19□□□□□ -1.1
RBFOX1-202ENST00000340209 RUSC1-AS1Q66K80 236 aa8.19□□□□□ -1.1
RBFOX1-202ENST00000340209 OR5AU1Q8NGC0 362 aa8.19□□□□□ -1.1
RBFOX1-202ENST00000340209 OR52E5Q8NH55 327 aa8.19□□□□□ -1.1
RBFOX1-202ENST00000340209 MT-ND4LP03901 98 aa8.18□□□□□ -1.1
RBFOX1-202ENST00000340209 GCHFRP30047 84 aa8.18□□□□□ -1.1
RBFOX1-202ENST00000340209 TCL1AP56279 114 aa8.18□□□□□ -1.1
RBFOX1-202ENST00000340209 ECSCRQ19T08 205 aa8.18□□□□□ -1.1
RBFOX1-202ENST00000340209 BRD3OSQ6XYD6 125 aa8.18□□□□□ -1.1
RBFOX1-202ENST00000340209 PPP1R27Q86WC6 154 aa8.18□□□□□ -1.1
RBFOX1-202ENST00000340209 CHODLQ9H9P2 273 aa8.18□□□□□ -1.1
RBFOX1-202ENST00000340209 YTHDF2Q9Y5A9 579 aaKnown RBP8.18□□□□□ -1.1
RBFOX1-202ENST00000340209 SFTPCP11686 197 aa8.18□□□□□ -1.1
RBFOX1-202ENST00000340209 CRYBB3P26998 211 aa8.18□□□□□ -1.1
RBFOX1-202ENST00000340209 DLX6P56179 175 aa8.18□□□□□ -1.1
RBFOX1-202ENST00000340209 C21orf62-AS1Q17RA5 79 aa8.18□□□□□ -1.1
RBFOX1-202ENST00000340209 C15orf54Q8N8G6 183 aa8.18□□□□□ -1.1
RBFOX1-202ENST00000340209 SRSF12Q8WXF0 261 aaKnown RBP8.18□□□□□ -1.1
RBFOX1-202ENST00000340209 BIN3Q9NQY0 253 aa8.18□□□□□ -1.1
RBFOX1-202ENST00000340209 KAAG1Q9UBP8 84 aa8.18□□□□□ -1.1
RBFOX1-202ENST00000340209 CHD6Q8TD26 2715 aa8.18□□□□□ -1.1
RBFOX1-202ENST00000340209 FASNP49327 2511 aaKnown RBP8.18□□□□□ -1.1
RBFOX1-202ENST00000340209 A0A1W2PN81 502 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms