RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 TMEM230Q96A57 120 aa11.02□□□□□ -0.65
ERCC1-203ENST00000340192 WDR89Q96FK6 387 aaPredicted RBP11.02□□□□□ -0.65
ERCC1-203ENST00000340192 SCGB3A2Q96PL1 93 aa11.02□□□□□ -0.65
ERCC1-203ENST00000340192 C19orf73Q9NVV2 129 aa11.02□□□□□ -0.65
ERCC1-203ENST00000340192 UFC1Q9Y3C8 167 aa11.02□□□□□ -0.65
ERCC1-203ENST00000340192 INS-IGF2F8WCM5 200 aa11.01□□□□□ -0.65
ERCC1-203ENST00000340192 MT-CO2P00403 227 aa11.01□□□□□ -0.65
ERCC1-203ENST00000340192 IGHV3-48P01763 117 aa11.01□□□□□ -0.65
ERCC1-203ENST00000340192 ADMP35318 185 aa11.01□□□□□ -0.65
ERCC1-203ENST00000340192 FAUP35544 74 aaKnown RBP11.01□□□□□ -0.65
ERCC1-203ENST00000340192 SNCAP37840 140 aa11.01□□□□□ -0.65
ERCC1-203ENST00000340192 HOXA1P49639 335 aaPredicted RBP11.01□□□□□ -0.65
ERCC1-203ENST00000340192 ELLP55199 621 aaPredicted RBP11.01□□□□□ -0.65
ERCC1-203ENST00000340192 AP3S2P59780 193 aa11.01□□□□□ -0.65
ERCC1-203ENST00000340192 CD81P60033 236 aa11.01□□□□□ -0.65
ERCC1-203ENST00000340192 GUCA2BQ16661 112 aa11.01□□□□□ -0.65
ERCC1-203ENST00000340192 TMEM268Q5VZI3 342 aa11.01□□□□□ -0.65
ERCC1-203ENST00000340192 ZNF57Q68EA5 555 aaPredicted RBP11.01□□□□□ -0.65
ERCC1-203ENST00000340192 BTNL8Q6UX41 500 aa11.01□□□□□ -0.65
ERCC1-203ENST00000340192 TOMM5Q8N4H5 51 aa11.01□□□□□ -0.65
ERCC1-203ENST00000340192 TMEM190Q8WZ59 177 aa11.01□□□□□ -0.65
ERCC1-203ENST00000340192 MARC2Q969Z3 335 aa11.01□□□□□ -0.65
ERCC1-203ENST00000340192 PINX1Q96BK5 328 aaKnown RBP11.01□□□□□ -0.65
ERCC1-203ENST00000340192 WWC2-AS2Q96NR7 200 aa11.01□□□□□ -0.65
ERCC1-203ENST00000340192 TMEM56-RWDD3S4R434 201 aa11.01□□□□□ -0.65
ERCC1-203ENST00000340192 NDUFA4O00483 81 aa11□□□□□ -0.65
ERCC1-203ENST00000340192 CTSGP08311 255 aa11□□□□□ -0.65
ERCC1-203ENST00000340192 C8orf88P0DMB2 117 aa11□□□□□ -0.65
ERCC1-203ENST00000340192 AKR1C4P17516 323 aa11□□□□□ -0.65
ERCC1-203ENST00000340192 MFAP4P55083 255 aa11□□□□□ -0.65
ERCC1-203ENST00000340192 AARDQ4LEZ3 155 aa11□□□□□ -0.65
ERCC1-203ENST00000340192 TMEM61Q8N0U2 210 aa11□□□□□ -0.65
ERCC1-203ENST00000340192 GALNT14Q96FL9 552 aa11□□□□□ -0.65
ERCC1-203ENST00000340192 NEURL2Q9BR09 285 aa11□□□□□ -0.65
ERCC1-203ENST00000340192 TUBA4BQ9H853 241 aa11□□□□□ -0.65
ERCC1-203ENST00000340192 ENY2Q9NPA8 101 aa11□□□□□ -0.65
ERCC1-203ENST00000340192 DAZ1Q9NQZ3 744 aaKnown RBP11□□□□□ -0.65
ERCC1-203ENST00000340192 CTNNBIP1Q9NSA3 81 aaPredicted RBP11□□□□□ -0.65
ERCC1-203ENST00000340192 GAR1Q9NY12 217 aaKnown RBP11□□□□□ -0.65
ERCC1-203ENST00000340192 PRR13Q9NZ81 148 aa11□□□□□ -0.65
ERCC1-203ENST00000340192 MRPL27Q9P0M9 148 aaKnown RBP11□□□□□ -0.65
ERCC1-203ENST00000340192 KCNIP3Q9Y2W7 256 aa11□□□□□ -0.65
ERCC1-203ENST00000340192 IGHV3OR16-8A0A075B7F1 116 aa10.99□□□□□ -0.65
ERCC1-203ENST00000340192 NUPL2O15504 423 aaKnown RBP10.99□□□□□ -0.65
ERCC1-203ENST00000340192 CD7P09564 240 aa10.99□□□□□ -0.65
ERCC1-203ENST00000340192 RNASE2P10153 161 aaKnown RBP10.99□□□□□ -0.65
ERCC1-203ENST00000340192 FCGR2BP31994 310 aaPredicted RBP10.99□□□□□ -0.65
ERCC1-203ENST00000340192 SPCS3P61009 180 aa10.99□□□□□ -0.65
ERCC1-203ENST00000340192 SUPT4H1P63272 117 aaKnown RBP10.99□□□□□ -0.65
ERCC1-203ENST00000340192 TMEM187Q14656 261 aa10.99□□□□□ -0.65
ERCC1-203ENST00000340192 SPANXN2Q5MJ10 180 aa10.99□□□□□ -0.65
ERCC1-203ENST00000340192 GPR146Q96CH1 333 aa10.99□□□□□ -0.65
ERCC1-203ENST00000340192 TXN2Q99757 166 aa10.99□□□□□ -0.65
ERCC1-203ENST00000340192 C20orf24Q9BUV8 137 aa10.99□□□□□ -0.65
ERCC1-203ENST00000340192 CACNG5Q9UF02 275 aa10.99□□□□□ -0.65
ERCC1-203ENST00000340192 TENM3Q9P273 2699 aa10.99□□□□□ -0.65
ERCC1-203ENST00000340192 SCAF4O95104 1147 aaKnown RBP10.98□□□□□ -0.65
ERCC1-203ENST00000340192 SUB1P53999 127 aaKnown RBP eCLIP10.98□□□□□ -0.65
ERCC1-203ENST00000340192 RELQ04864 619 aaPredicted RBP10.98□□□□□ -0.65
ERCC1-203ENST00000340192 PVRIGQ6DKI7 326 aa10.98□□□□□ -0.65
ERCC1-203ENST00000340192 OR52E5Q8NH55 327 aa10.98□□□□□ -0.65
ERCC1-203ENST00000340192 IL22RA2Q969J5 263 aa10.98□□□□□ -0.65
ERCC1-203ENST00000340192 ZNF414Q96IQ9 312 aa10.98□□□□□ -0.65
ERCC1-203ENST00000340192 RCHY1Q96PM5 261 aa10.98□□□□□ -0.65
ERCC1-203ENST00000340192 TM2D3Q9BRN9 247 aa10.98□□□□□ -0.65
ERCC1-203ENST00000340192 ZMAT4Q9H898 229 aa10.98□□□□□ -0.65
ERCC1-203ENST00000340192 STAB2Q8WWQ8 2551 aa10.98□□□□□ -0.65
ERCC1-203ENST00000340192 ZNF207O43670 478 aaKnown RBP10.97□□□□□ -0.65
ERCC1-203ENST00000340192 GNG7O60262 68 aa10.97□□□□□ -0.65
ERCC1-203ENST00000340192 BSXQ3C1V8 233 aa10.97□□□□□ -0.65
ERCC1-203ENST00000340192 RBPMS2Q6ZRY4 209 aaKnown RBP10.97□□□□□ -0.65
ERCC1-203ENST00000340192 TMED4Q7Z7H5 227 aa10.97□□□□□ -0.65
ERCC1-203ENST00000340192 DEFB125Q8N687 156 aa10.97□□□□□ -0.65
ERCC1-203ENST00000340192 DEDD2Q8WXF8 326 aa10.97□□□□□ -0.65
ERCC1-203ENST00000340192 SRRQ9GZT4 340 aa10.97□□□□□ -0.65
ERCC1-203ENST00000340192 WFDC10AQ9H1F0 79 aa10.97□□□□□ -0.65
ERCC1-203ENST00000340192 TRAV25A0A0B4J276 109 aa10.96□□□□□ -0.65
ERCC1-203ENST00000340192 C15orf62A8K5M9 175 aa10.96□□□□□ -0.65
ERCC1-203ENST00000340192 OR11H12B2RN74 326 aa10.96□□□□□ -0.65
ERCC1-203ENST00000340192 K7EMT4 169 aa10.96□□□□□ -0.65
ERCC1-203ENST00000340192 CORTO00230 105 aa10.96□□□□□ -0.65
ERCC1-203ENST00000340192 NXPH3O95157 252 aa10.96□□□□□ -0.65
ERCC1-203ENST00000340192 ANXA3P12429 323 aa10.96□□□□□ -0.65
ERCC1-203ENST00000340192 HAGHQ16775 308 aa10.96□□□□□ -0.65
ERCC1-203ENST00000340192 SLC16A13Q7RTY0 426 aa10.96□□□□□ -0.65
ERCC1-203ENST00000340192 LYZL2Q7Z4W2 148 aa10.96□□□□□ -0.65
ERCC1-203ENST00000340192 DUSP18Q8NEJ0 188 aa10.96□□□□□ -0.65
ERCC1-203ENST00000340192 OR52B4Q8NGK2 314 aa10.96□□□□□ -0.65
ERCC1-203ENST00000340192 HEYLQ9NQ87 328 aaPredicted RBP10.96□□□□□ -0.65
ERCC1-203ENST00000340192 A0A0B4J2A0 478 aa10.95□□□□□ -0.66
ERCC1-203ENST00000340192 CEBPZOSA8MTT3 80 aa10.95□□□□□ -0.66
ERCC1-203ENST00000340192 YIF1AO95070 293 aa10.95□□□□□ -0.66
ERCC1-203ENST00000340192 SULT1A3P0DMM9 295 aa10.95□□□□□ -0.66
ERCC1-203ENST00000340192 SULT1A4P0DMN0 295 aa10.95□□□□□ -0.66
ERCC1-203ENST00000340192 HTR2BP41595 481 aa10.95□□□□□ -0.66
ERCC1-203ENST00000340192 NPBWR1P48145 328 aa10.95□□□□□ -0.66
ERCC1-203ENST00000340192 SRPXP78539 464 aa10.95□□□□□ -0.66
ERCC1-203ENST00000340192 ANKRD55Q3KP44 614 aa10.95□□□□□ -0.66
ERCC1-203ENST00000340192 TMEM128Q5BJH2 165 aa10.95□□□□□ -0.66
ERCC1-203ENST00000340192 NMSQ5H8A3 153 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms