RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 WFDC5Q8TCV5 224 aa2.8□□□□□ -1.96
CSMD3-202ENST00000339701 TSKUQ8WUA8 353 aa2.8□□□□□ -1.96
CSMD3-202ENST00000339701 RHOVQ96L33 236 aa2.8□□□□□ -1.96
CSMD3-202ENST00000339701 PGLYRP3Q96LB9 341 aa2.8□□□□□ -1.96
CSMD3-202ENST00000339701 NPCDR1Q9BY65 106 aa2.8□□□□□ -1.96
CSMD3-202ENST00000339701 WFDC1Q9HC57 220 aa2.8□□□□□ -1.96
CSMD3-202ENST00000339701 SPTBN4Q9H254 2564 aa2.8□□□□□ -1.96
CSMD3-202ENST00000339701 A0A1W2PPI3 338 aa2.8□□□□□ -1.96
CSMD3-202ENST00000339701 PRSS2P07478 247 aa2.8□□□□□ -1.96
CSMD3-202ENST00000339701 EFNA4P52798 201 aa2.8□□□□□ -1.96
CSMD3-202ENST00000339701 FAM78BQ5VT40 261 aa2.8□□□□□ -1.96
CSMD3-202ENST00000339701 ZNF645Q8N7E2 425 aa2.8□□□□□ -1.96
CSMD3-202ENST00000339701 DLX4Q92988 240 aaPredicted RBP2.8□□□□□ -1.96
CSMD3-202ENST00000339701 HARBI1Q96MB7 349 aa2.8□□□□□ -1.96
CSMD3-202ENST00000339701 EMCNQ9ULC0 261 aa2.8□□□□□ -1.96
CSMD3-202ENST00000339701 HS3ST3B1Q9Y662 390 aa2.8□□□□□ -1.96
CSMD3-202ENST00000339701 A0A0A6YYD5 115 aa2.79□□□□□ -1.96
CSMD3-202ENST00000339701 A6NNC1 897 aa2.79□□□□□ -1.96
CSMD3-202ENST00000339701 FAM157AC9JC47 383 aa2.79□□□□□ -1.96
CSMD3-202ENST00000339701 FXYD1O00168 92 aa2.79□□□□□ -1.96
CSMD3-202ENST00000339701 ICOSLGO75144 302 aa2.79□□□□□ -1.96
CSMD3-202ENST00000339701 NDUFB1O75438 58 aa2.79□□□□□ -1.96
CSMD3-202ENST00000339701 SMIM18P0DKX4 95 aa2.79□□□□□ -1.96
CSMD3-202ENST00000339701 SRSF1Q07955 248 aaKnown RBP eCLIP2.79□□□□□ -1.96
CSMD3-202ENST00000339701 LINC00303Q3SY05 128 aa2.79□□□□□ -1.96
CSMD3-202ENST00000339701 FZR1Q9UM11 496 aa2.79□□□□□ -1.96
CSMD3-202ENST00000339701 CISD3P0C7P0 127 aa2.79□□□□□ -1.96
CSMD3-202ENST00000339701 TSPO2Q5TGU0 170 aa2.79□□□□□ -1.96
CSMD3-202ENST00000339701 FOXB2Q5VYV0 432 aa2.79□□□□□ -1.96
CSMD3-202ENST00000339701 C11orf42Q8N5U0 333 aa2.79□□□□□ -1.96
CSMD3-202ENST00000339701 SCARF2Q96GP6 870 aaPredicted RBP2.79□□□□□ -1.96
CSMD3-202ENST00000339701 HSPB9Q9BQS6 159 aa2.79□□□□□ -1.96
CSMD3-202ENST00000339701 TAS2R4Q9NYW5 299 aa2.79□□□□□ -1.96
CSMD3-202ENST00000339701 MUC4Q99102 2169 aa2.79□□□□□ -1.96
CSMD3-202ENST00000339701 FLG2Q5D862 2391 aaPredicted RBP2.79□□□□□ -1.96
CSMD3-202ENST00000339701 PSMB11A5LHX3 300 aa2.79□□□□□ -1.96
CSMD3-202ENST00000339701 C9JQL5 133 aa2.79□□□□□ -1.96
CSMD3-202ENST00000339701 PRB1P04280 392 aa2.79□□□□□ -1.96
CSMD3-202ENST00000339701 REG1AP05451 166 aa2.79□□□□□ -1.96
CSMD3-202ENST00000339701 WNT3P56703 355 aa2.79□□□□□ -1.96
CSMD3-202ENST00000339701 GLMPQ8WWB7 406 aa2.79□□□□□ -1.96
CSMD3-202ENST00000339701 ISOC2Q96AB3 205 aa2.79□□□□□ -1.96
CSMD3-202ENST00000339701 TRAV27A0A087WT01 109 aa2.79□□□□□ -1.96
CSMD3-202ENST00000339701 RNF223E7ERA6 249 aa2.79□□□□□ -1.96
CSMD3-202ENST00000339701 F5H697 171 aa2.79□□□□□ -1.96
CSMD3-202ENST00000339701 HBDP02042 147 aa2.79□□□□□ -1.96
CSMD3-202ENST00000339701 IL6RP08887 468 aaPredicted RBP2.79□□□□□ -1.96
CSMD3-202ENST00000339701 ZNF121P58317 390 aaPredicted RBP2.79□□□□□ -1.96
CSMD3-202ENST00000339701 SLC35E4Q6ICL7 350 aa2.79□□□□□ -1.96
CSMD3-202ENST00000339701 GTSF1LQ9H1H1 148 aa2.79□□□□□ -1.96
CSMD3-202ENST00000339701 KLF12Q9Y4X4 402 aa2.79□□□□□ -1.96
CSMD3-202ENST00000339701 IGHV3-15A0A0B4J1V0 119 aa2.79□□□□□ -1.96
CSMD3-202ENST00000339701 RNF222A6NCQ9 220 aa2.79□□□□□ -1.96
CSMD3-202ENST00000339701 PRSS53Q2L4Q9 553 aa2.79□□□□□ -1.96
CSMD3-202ENST00000339701 ZNF683Q8IZ20 524 aa2.79□□□□□ -1.96
CSMD3-202ENST00000339701 FAM24BQ8N5W8 94 aa2.79□□□□□ -1.96
CSMD3-202ENST00000339701 C16orf52Q8NHV5 167 aa2.79□□□□□ -1.96
CSMD3-202ENST00000339701 MZB1Q8WU39 189 aa2.79□□□□□ -1.96
CSMD3-202ENST00000339701 UBL5Q9BZL1 73 aa2.79□□□□□ -1.96
CSMD3-202ENST00000339701 PDFQ9HBH1 243 aa2.79□□□□□ -1.96
CSMD3-202ENST00000339701 RFNGQ9Y644 331 aa2.79□□□□□ -1.96
CSMD3-202ENST00000339701 NKX2-6A6NCS4 301 aa2.79□□□□□ -1.96
CSMD3-202ENST00000339701 SAP30O75446 220 aa2.79□□□□□ -1.96
CSMD3-202ENST00000339701 NDUFB8O95169 186 aa2.79□□□□□ -1.96
CSMD3-202ENST00000339701 GATA4P43694 442 aa2.79□□□□□ -1.96
CSMD3-202ENST00000339701 SELENOPP49908 381 aa2.79□□□□□ -1.96
CSMD3-202ENST00000339701 PPP1R1AQ13522 171 aa2.79□□□□□ -1.96
CSMD3-202ENST00000339701 CEACAM21Q3KPI0 293 aa2.79□□□□□ -1.96
CSMD3-202ENST00000339701 ZNF506Q5JVG8 444 aa2.79□□□□□ -1.96
CSMD3-202ENST00000339701 OR10S1Q8NGN2 331 aa2.79□□□□□ -1.96
CSMD3-202ENST00000339701 SMIM3Q9BZL3 60 aa2.79□□□□□ -1.96
CSMD3-202ENST00000339701 FRRS1LQ9P0K9 344 aa2.79□□□□□ -1.96
CSMD3-202ENST00000339701 AGRNO00468 2067 aa2.79□□□□□ -1.96
CSMD3-202ENST00000339701 TRGV11A0A075B6L2 103 aa2.79□□□□□ -1.96
CSMD3-202ENST00000339701 IGHV1-45A0A0A0MS14 117 aa2.79□□□□□ -1.96
CSMD3-202ENST00000339701 PRR32B1ATL7 298 aa2.79□□□□□ -1.96
CSMD3-202ENST00000339701 NMBP08949 121 aa2.79□□□□□ -1.96
CSMD3-202ENST00000339701 ZNF25P17030 456 aaPredicted RBP2.79□□□□□ -1.96
CSMD3-202ENST00000339701 KLK2P20151 261 aa2.79□□□□□ -1.96
CSMD3-202ENST00000339701 ELLP55199 621 aaPredicted RBP2.79□□□□□ -1.96
CSMD3-202ENST00000339701 ECSCRQ19T08 205 aa2.79□□□□□ -1.96
CSMD3-202ENST00000339701 PYY3Q5JQD4 70 aa2.79□□□□□ -1.96
CSMD3-202ENST00000339701 NHLRC3Q5JS37 347 aa2.79□□□□□ -1.96
CSMD3-202ENST00000339701 PUSL1Q8N0Z8 303 aaKnown RBP2.79□□□□□ -1.96
CSMD3-202ENST00000339701 SLC25A45Q8N413 288 aa2.79□□□□□ -1.96
CSMD3-202ENST00000339701 COX14Q96I36 57 aa2.79□□□□□ -1.96
CSMD3-202ENST00000339701 LINC00470Q9BZP3 86 aa2.79□□□□□ -1.96
CSMD3-202ENST00000339701 ZFHX2Q9C0A1 2572 aaPredicted RBP2.79□□□□□ -1.96
CSMD3-202ENST00000339701 IGHV3OR16-12A0A075B7B8 117 aa2.79□□□□□ -1.96
CSMD3-202ENST00000339701 RPL27AP46776 148 aaKnown RBP2.79□□□□□ -1.96
CSMD3-202ENST00000339701 CCL20P78556 96 aa2.79□□□□□ -1.96
CSMD3-202ENST00000339701 FAM90A2PQ658T7 463 aa2.79□□□□□ -1.96
CSMD3-202ENST00000339701 Q6ZS49 121 aa2.79□□□□□ -1.96
CSMD3-202ENST00000339701 TMEM123Q8N131 208 aa2.79□□□□□ -1.96
CSMD3-202ENST00000339701 RMI2Q96E14 147 aa2.79□□□□□ -1.96
CSMD3-202ENST00000339701 MYEOVQ96EZ4 313 aa2.79□□□□□ -1.96
CSMD3-202ENST00000339701 MESP1Q9BRJ9 268 aa2.79□□□□□ -1.96
CSMD3-202ENST00000339701 MRPL18Q9H0U6 180 aaKnown RBP2.79□□□□□ -1.96
CSMD3-202ENST00000339701 LOC107984156A0A0G2JMH3 177 aa2.79□□□□□ -1.96
CSMD3-202ENST00000339701 TMEM272A0A1B0GTI8 110 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms