RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 GPR12P47775 334 aa7.95□□□□□ -1.14
PTCHD4-201ENST00000339488 TAS2R45P59539 299 aa7.95□□□□□ -1.14
PTCHD4-201ENST00000339488 ZNF816Q0VGE8 651 aaPredicted RBP7.95□□□□□ -1.14
PTCHD4-201ENST00000339488 KLF5Q13887 457 aaPredicted RBP7.95□□□□□ -1.14
PTCHD4-201ENST00000339488 ANKRD37Q7Z713 158 aa7.95□□□□□ -1.14
PTCHD4-201ENST00000339488 CCL4L1Q8NHW4 92 aa7.95□□□□□ -1.14
PTCHD4-201ENST00000339488 C10orf35Q96D05 121 aa7.95□□□□□ -1.14
PTCHD4-201ENST00000339488 ADTRPQ96IZ2 230 aa7.95□□□□□ -1.14
PTCHD4-201ENST00000339488 TMUB1Q9BVT8 246 aa7.95□□□□□ -1.14
PTCHD4-201ENST00000339488 TRIOBPQ9H2D6 2365 aa7.95□□□□□ -1.14
PTCHD4-201ENST00000339488 PTPRSQ13332 1948 aa7.95□□□□□ -1.14
PTCHD4-201ENST00000339488 A0A087WX48 190 aa7.95□□□□□ -1.14
PTCHD4-201ENST00000339488 SMAD7O15105 426 aaKnown RBP7.95□□□□□ -1.14
PTCHD4-201ENST00000339488 CXCL10P02778 98 aa7.95□□□□□ -1.14
PTCHD4-201ENST00000339488 DEFB103AP81534 67 aa7.95□□□□□ -1.14
PTCHD4-201ENST00000339488 C20orf204Q6ZNR8 217 aa7.95□□□□□ -1.14
PTCHD4-201ENST00000339488 FGFBP3Q8TAT2 258 aa7.95□□□□□ -1.14
PTCHD4-201ENST00000339488 BORCS8Q96FH0 119 aa7.95□□□□□ -1.14
PTCHD4-201ENST00000339488 AJUBAQ96IF1 538 aa7.95□□□□□ -1.14
PTCHD4-201ENST00000339488 FZR1Q9UM11 496 aa7.95□□□□□ -1.14
PTCHD4-201ENST00000339488 LTBP2Q14767 1821 aa7.94□□□□□ -1.14
PTCHD4-201ENST00000339488 TMSB15BA0A087X1C1 80 aa7.94□□□□□ -1.14
PTCHD4-201ENST00000339488 TRAV5A0A0B4J249 113 aa7.94□□□□□ -1.14
PTCHD4-201ENST00000339488 C21orf140B9A014 251 aa7.94□□□□□ -1.14
PTCHD4-201ENST00000339488 IGHMP01871 453 aa7.94□□□□□ -1.14
PTCHD4-201ENST00000339488 RBM11P57052 281 aaKnown RBP7.94□□□□□ -1.14
PTCHD4-201ENST00000339488 GAGE13Q4V321 117 aa7.94□□□□□ -1.14
PTCHD4-201ENST00000339488 Q6AWC8 147 aa7.94□□□□□ -1.14
PTCHD4-201ENST00000339488 PIP4P2Q8N4L2 257 aa7.94□□□□□ -1.14
PTCHD4-201ENST00000339488 GTSF1Q8WW33 167 aa7.94□□□□□ -1.14
PTCHD4-201ENST00000339488 RP1P56715 2156 aa7.94□□□□□ -1.14
PTCHD4-201ENST00000339488 HCFC1P51610 2035 aa7.94□□□□□ -1.14
PTCHD4-201ENST00000339488 COL4A6Q14031 1691 aa7.94□□□□□ -1.14
PTCHD4-201ENST00000339488 FABP5P3A8MUU1 101 aa7.94□□□□□ -1.14
PTCHD4-201ENST00000339488 F8W1H4 67 aa7.94□□□□□ -1.14
PTCHD4-201ENST00000339488 PRRG2O14669 202 aa7.94□□□□□ -1.14
PTCHD4-201ENST00000339488 CXorf1O96002 111 aa7.94□□□□□ -1.14
PTCHD4-201ENST00000339488 GABRG2P18507 467 aa7.94□□□□□ -1.14
PTCHD4-201ENST00000339488 CA6P23280 308 aa7.94□□□□□ -1.14
PTCHD4-201ENST00000339488 REG1BP48304 166 aa7.94□□□□□ -1.14
PTCHD4-201ENST00000339488 FBXW4P57775 412 aa7.94□□□□□ -1.14
PTCHD4-201ENST00000339488 ZNF766Q5HY98 468 aa7.94□□□□□ -1.14
PTCHD4-201ENST00000339488 TEPPQ6URK8 271 aa7.94□□□□□ -1.14
PTCHD4-201ENST00000339488 C16orf47Q6ZP98 133 aaPredicted RBP7.94□□□□□ -1.14
PTCHD4-201ENST00000339488 WFDC3Q8IUB2 231 aa7.94□□□□□ -1.14
PTCHD4-201ENST00000339488 OR4A16Q8NH70 328 aa7.94□□□□□ -1.14
PTCHD4-201ENST00000339488 C12orf49Q9H741 205 aa7.94□□□□□ -1.14
PTCHD4-201ENST00000339488 HEYLQ9NQ87 328 aaPredicted RBP7.94□□□□□ -1.14
PTCHD4-201ENST00000339488 FREM2Q5SZK8 3169 aa7.94□□□□□ -1.14
PTCHD4-201ENST00000339488 HIGD1CA8MV81 97 aa7.93□□□□□ -1.14
PTCHD4-201ENST00000339488 C9JCJ5 164 aa7.93□□□□□ -1.14
PTCHD4-201ENST00000339488 LTAP01374 205 aa7.93□□□□□ -1.14
PTCHD4-201ENST00000339488 IGLV2-8P01709 118 aa7.93□□□□□ -1.14
PTCHD4-201ENST00000339488 CT45A6P0DMU7 189 aa7.93□□□□□ -1.14
PTCHD4-201ENST00000339488 CT45A5P0DMU8 189 aa7.93□□□□□ -1.14
PTCHD4-201ENST00000339488 CT45A7P0DMV0 189 aa7.93□□□□□ -1.14
PTCHD4-201ENST00000339488 CSN1S1P47710 185 aa7.93□□□□□ -1.14
PTCHD4-201ENST00000339488 LINC00205P59089 165 aa7.93□□□□□ -1.14
PTCHD4-201ENST00000339488 FOXI1Q12951 378 aa7.93□□□□□ -1.14
PTCHD4-201ENST00000339488 MRPL23Q16540 153 aaKnown RBP7.93□□□□□ -1.14
PTCHD4-201ENST00000339488 CT45A1Q5HYN5 189 aa7.93□□□□□ -1.14
PTCHD4-201ENST00000339488 LINC01545Q5VT33 79 aa7.93□□□□□ -1.14
PTCHD4-201ENST00000339488 FAM53AQ6NSI3 398 aaPredicted RBP7.93□□□□□ -1.14
PTCHD4-201ENST00000339488 MOB1BQ7L9L4 216 aa7.93□□□□□ -1.14
PTCHD4-201ENST00000339488 CT45A3Q8NHU0 189 aa7.93□□□□□ -1.14
PTCHD4-201ENST00000339488 PATE1Q8WXA2 126 aa7.93□□□□□ -1.14
PTCHD4-201ENST00000339488 ELSPBP1Q96BH3 223 aa7.93□□□□□ -1.14
PTCHD4-201ENST00000339488 A8MWL6 223 aa7.93□□□□□ -1.14
PTCHD4-201ENST00000339488 RBP4P02753 201 aa7.93□□□□□ -1.14
PTCHD4-201ENST00000339488 FGFRL1Q8N441 504 aa7.93□□□□□ -1.14
PTCHD4-201ENST00000339488 OR5AN1Q8NGI8 311 aa7.93□□□□□ -1.14
PTCHD4-201ENST00000339488 OSTCQ9NRP0 149 aa7.93□□□□□ -1.14
PTCHD4-201ENST00000339488 THADAQ6YHU6 1953 aa7.93□□□□□ -1.14
PTCHD4-201ENST00000339488 EXPH5Q8NEV8 1989 aa7.93□□□□□ -1.14
PTCHD4-201ENST00000339488 DHHO43323 396 aa7.92□□□□□ -1.14
PTCHD4-201ENST00000339488 CLPSP04118 112 aa7.92□□□□□ -1.14
PTCHD4-201ENST00000339488 FAM106CPP0CH98 169 aa7.92□□□□□ -1.14
PTCHD4-201ENST00000339488 KLRD1Q13241 179 aa7.92□□□□□ -1.14
PTCHD4-201ENST00000339488 FAM106AQ4KMX7 169 aa7.92□□□□□ -1.14
PTCHD4-201ENST00000339488 ZFAND6Q6FIF0 208 aa7.92□□□□□ -1.14
PTCHD4-201ENST00000339488 TMEM211Q6ICI0 200 aa7.92□□□□□ -1.14
PTCHD4-201ENST00000339488 FAM159AQ6UWV7 190 aa7.92□□□□□ -1.14
PTCHD4-201ENST00000339488 H1FNTQ75WM6 255 aaPredicted RBP7.92□□□□□ -1.14
PTCHD4-201ENST00000339488 SNRNP40Q96DI7 357 aaKnown RBP7.92□□□□□ -1.14
PTCHD4-201ENST00000339488 GAGE12JA6NER3 117 aa7.92□□□□□ -1.14
PTCHD4-201ENST00000339488 GAGE7O76087 117 aa7.92□□□□□ -1.14
PTCHD4-201ENST00000339488 OR5AL1P0C617 328 aa7.92□□□□□ -1.14
PTCHD4-201ENST00000339488 GAGE12FP0CL80 117 aa7.92□□□□□ -1.14
PTCHD4-201ENST00000339488 GAGE12GP0CL81 117 aa7.92□□□□□ -1.14
PTCHD4-201ENST00000339488 GAGE12IP0CL82 117 aa7.92□□□□□ -1.14
PTCHD4-201ENST00000339488 P2RY2P41231 377 aa7.92□□□□□ -1.14
PTCHD4-201ENST00000339488 GAGE4Q13068 117 aa7.92□□□□□ -1.14
PTCHD4-201ENST00000339488 TEX29Q8N6K0 151 aa7.92□□□□□ -1.14
PTCHD4-201ENST00000339488 OR13H1Q8NG92 308 aa7.92□□□□□ -1.14
PTCHD4-201ENST00000339488 TRIB1Q96RU8 372 aa7.92□□□□□ -1.14
PTCHD4-201ENST00000339488 PRTFDC1Q9NRG1 225 aa7.92□□□□□ -1.14
PTCHD4-201ENST00000339488 PRO0461Q9UI25 63 aa7.92□□□□□ -1.14
PTCHD4-201ENST00000339488 CSDC2Q9Y534 153 aaKnown RBP7.92□□□□□ -1.14
PTCHD4-201ENST00000339488 LAMA1P25391 3075 aa7.92□□□□□ -1.14
PTCHD4-201ENST00000339488 LOC107984640A0A0U1RRK4 108 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms