RNA–Protein interactions for RNA: ENST00000339438.10

CSDE1-202, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-202ENST00000339438 SYS1-DBNDD2H3BUS1 97 aa4.59□□□□□ -1.67
CSDE1-202ENST00000339438 ZFAND5O76080 213 aa4.59□□□□□ -1.67
CSDE1-202ENST00000339438 AMY1AP04745 511 aa4.59□□□□□ -1.67
CSDE1-202ENST00000339438 GATA3P23771 443 aa4.59□□□□□ -1.67
CSDE1-202ENST00000339438 RPL31P62899 125 aaKnown RBP4.59□□□□□ -1.67
CSDE1-202ENST00000339438 EIF4EBP1Q13541 118 aaPredicted RBP4.59□□□□□ -1.67
CSDE1-202ENST00000339438 MRPL54Q6P161 138 aaKnown RBP4.59□□□□□ -1.67
CSDE1-202ENST00000339438 SLC25A34Q6PIV7 304 aa4.59□□□□□ -1.67
CSDE1-202ENST00000339438 FAM216AQ8WUB2 273 aa4.59□□□□□ -1.67
CSDE1-202ENST00000339438 FER1L6-AS2Q96M78 137 aa4.59□□□□□ -1.67
CSDE1-202ENST00000339438 PSMG3-AS1Q96PY0 264 aa4.59□□□□□ -1.67
CSDE1-202ENST00000339438 TXNDC17Q9BRA2 123 aa4.59□□□□□ -1.67
CSDE1-202ENST00000339438 ALKBH4Q9NXW9 302 aa4.59□□□□□ -1.67
CSDE1-202ENST00000339438 SH2D7A6NKC9 451 aaPredicted RBP4.59□□□□□ -1.68
CSDE1-202ENST00000339438 OR2J3O76001 311 aa4.59□□□□□ -1.68
CSDE1-202ENST00000339438 PRSS12P56730 875 aa4.59□□□□□ -1.68
CSDE1-202ENST00000339438 SLC35B1P78383 322 aa4.59□□□□□ -1.68
CSDE1-202ENST00000339438 HSD52Q0P140 79 aa4.59□□□□□ -1.68
CSDE1-202ENST00000339438 CDSNQ15517 529 aa4.59□□□□□ -1.68
CSDE1-202ENST00000339438 SPINK14Q6IE38 97 aa4.59□□□□□ -1.68
CSDE1-202ENST00000339438 FAM58AQ8N1B3 248 aa4.59□□□□□ -1.68
CSDE1-202ENST00000339438 FAM168AQ92567 244 aa4.59□□□□□ -1.68
CSDE1-202ENST00000339438 IGF2BP2-AS1Q96M15 143 aa4.59□□□□□ -1.68
CSDE1-202ENST00000339438 TMEM147Q9BVK8 224 aa4.59□□□□□ -1.68
CSDE1-202ENST00000339438 RNASE7Q9H1E1 156 aaKnown RBP4.59□□□□□ -1.68
CSDE1-202ENST00000339438 DEPPQ9NTK1 212 aa4.59□□□□□ -1.68
CSDE1-202ENST00000339438 TLN1Q9Y490 2541 aaKnown RBP4.59□□□□□ -1.68
CSDE1-202ENST00000339438 A0A0G2JMM0 328 aa4.58□□□□□ -1.68
CSDE1-202ENST00000339438 A0A1W2PPB8 328 aa4.58□□□□□ -1.68
CSDE1-202ENST00000339438 GAGE12HA6NDE8 117 aa4.58□□□□□ -1.68
CSDE1-202ENST00000339438 KIR3DP1A8MWS1 328 aa4.58□□□□□ -1.68
CSDE1-202ENST00000339438 FAM90A26D6RGX4 464 aa4.58□□□□□ -1.68
CSDE1-202ENST00000339438 OVOL3O00110 214 aa4.58□□□□□ -1.68
CSDE1-202ENST00000339438 SPINK4O60575 86 aa4.58□□□□□ -1.68
CSDE1-202ENST00000339438 HLA-DQA1P01909 254 aa4.58□□□□□ -1.68
CSDE1-202ENST00000339438 ARL14EPLP0DKL9 152 aa4.58□□□□□ -1.68
CSDE1-202ENST00000339438 NTF3P20783 257 aa4.58□□□□□ -1.68
CSDE1-202ENST00000339438 FAM214BQ7L5A3 538 aa4.58□□□□□ -1.68
CSDE1-202ENST00000339438 RPS19BP1Q86WX3 136 aaKnown RBP4.58□□□□□ -1.68
CSDE1-202ENST00000339438 KRTAP1-3Q8IUG1 177 aa4.58□□□□□ -1.68
CSDE1-202ENST00000339438 TMEM70Q9BUB7 260 aa4.58□□□□□ -1.68
CSDE1-202ENST00000339438 HES7Q9BYE0 225 aa4.58□□□□□ -1.68
CSDE1-202ENST00000339438 ROS1P08922 2347 aa4.58□□□□□ -1.68
CSDE1-202ENST00000339438 IGHV1-24A0A0C4DH33 117 aa4.58□□□□□ -1.68
CSDE1-202ENST00000339438 A0A1W2PNR3 127 aa4.58□□□□□ -1.68
CSDE1-202ENST00000339438 BLACEA4D250 179 aa4.58□□□□□ -1.68
CSDE1-202ENST00000339438 TNFSF11O14788 317 aa4.58□□□□□ -1.68
CSDE1-202ENST00000339438 NKX2-8O15522 239 aa4.58□□□□□ -1.68
CSDE1-202ENST00000339438 CRYGCP07315 174 aa4.58□□□□□ -1.68
CSDE1-202ENST00000339438 COX8AP10176 69 aa4.58□□□□□ -1.68
CSDE1-202ENST00000339438 AREGP15514 252 aa4.58□□□□□ -1.68
CSDE1-202ENST00000339438 GPR183P32249 361 aa4.58□□□□□ -1.68
CSDE1-202ENST00000339438 PPOXP50336 477 aa4.58□□□□□ -1.68
CSDE1-202ENST00000339438 CCL11P51671 97 aa4.58□□□□□ -1.68
CSDE1-202ENST00000339438 CKS1BP61024 79 aa4.58□□□□□ -1.68
CSDE1-202ENST00000339438 SEC11AP67812 179 aa4.58□□□□□ -1.68
CSDE1-202ENST00000339438 SRYQ05066 204 aa4.58□□□□□ -1.68
CSDE1-202ENST00000339438 CD300EQ496F6 205 aaPredicted RBP4.58□□□□□ -1.68
CSDE1-202ENST00000339438 FAM180AQ6UWF9 173 aa4.58□□□□□ -1.68
CSDE1-202ENST00000339438 ADAMTSL5Q6ZMM2 481 aa4.58□□□□□ -1.68
CSDE1-202ENST00000339438 SEM1Q6ZVN7 128 aa4.58□□□□□ -1.68
CSDE1-202ENST00000339438 MRPL21Q7Z2W9 205 aaKnown RBP4.58□□□□□ -1.68
CSDE1-202ENST00000339438 C5orf30Q96GV9 206 aa4.58□□□□□ -1.68
CSDE1-202ENST00000339438 SETXQ7Z333 2677 aaKnown RBP4.58□□□□□ -1.68
CSDE1-202ENST00000339438 ZNF207O43670 478 aaKnown RBP4.58□□□□□ -1.68
CSDE1-202ENST00000339438 OR7C1O76099 320 aaPredicted RBP4.58□□□□□ -1.68
CSDE1-202ENST00000339438 CCL3P10147 92 aa4.58□□□□□ -1.68
CSDE1-202ENST00000339438 TGFBR3Q03167 851 aa4.58□□□□□ -1.68
CSDE1-202ENST00000339438 ASPHD1Q5U4P2 390 aa4.58□□□□□ -1.68
CSDE1-202ENST00000339438 TEPPQ6URK8 271 aa4.58□□□□□ -1.68
CSDE1-202ENST00000339438 PET117Q6UWS5 81 aa4.58□□□□□ -1.68
CSDE1-202ENST00000339438 Q6ZS92 163 aa4.58□□□□□ -1.68
CSDE1-202ENST00000339438 OR5A2Q8NGI9 324 aa4.58□□□□□ -1.68
CSDE1-202ENST00000339438 OR2AE1Q8NHA4 323 aa4.58□□□□□ -1.68
CSDE1-202ENST00000339438 ABHD17AQ96GS6 310 aa4.58□□□□□ -1.68
CSDE1-202ENST00000339438 OSTCQ9NRP0 149 aa4.58□□□□□ -1.68
CSDE1-202ENST00000339438 IL36RNQ9UBH0 155 aa4.58□□□□□ -1.68
CSDE1-202ENST00000339438 WDR83OSQ9Y284 106 aa4.58□□□□□ -1.68
CSDE1-202ENST00000339438 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.57□□□□□ -1.68
CSDE1-202ENST00000339438 IGHV3-15A0A0B4J1V0 119 aa4.57□□□□□ -1.68
CSDE1-202ENST00000339438 A0A1W2PPM0 123 aa4.57□□□□□ -1.68
CSDE1-202ENST00000339438 NPIPB11E5RHQ5 1161 aa4.57□□□□□ -1.68
CSDE1-202ENST00000339438 MT-CO2P00403 227 aa4.57□□□□□ -1.68
CSDE1-202ENST00000339438 B3GALT5-AS1P59052 145 aa4.57□□□□□ -1.68
CSDE1-202ENST00000339438 SPATA31B1PQ5VZV4 182 aa4.57□□□□□ -1.68
CSDE1-202ENST00000339438 CARD17Q5XLA6 110 aa4.57□□□□□ -1.68
CSDE1-202ENST00000339438 YRDCQ86U90 279 aaKnown RBP4.57□□□□□ -1.68
CSDE1-202ENST00000339438 PLEK2Q9NYT0 353 aa4.57□□□□□ -1.68
CSDE1-202ENST00000339438 OR2W1Q9Y3N9 320 aa4.57□□□□□ -1.68
CSDE1-202ENST00000339438 ICE1Q9Y2F5 2266 aa4.57□□□□□ -1.68
CSDE1-202ENST00000339438 TRBV6-6A0A0A6YYG2 114 aa4.57□□□□□ -1.68
CSDE1-202ENST00000339438 A0A1B0GXF2 115 aa4.57□□□□□ -1.68
CSDE1-202ENST00000339438 M0R2Z0 102 aa4.57□□□□□ -1.68
CSDE1-202ENST00000339438 ISLRO14498 428 aa4.57□□□□□ -1.68
CSDE1-202ENST00000339438 NEURL1O76050 574 aa4.57□□□□□ -1.68
CSDE1-202ENST00000339438 APCSP02743 223 aa4.57□□□□□ -1.68
CSDE1-202ENST00000339438 SERPINE2P07093 398 aa4.57□□□□□ -1.68
CSDE1-202ENST00000339438 RPL8P62917 257 aaKnown RBP4.57□□□□□ -1.68
CSDE1-202ENST00000339438 MALLQ13021 153 aa4.57□□□□□ -1.68
CSDE1-202ENST00000339438 COX19Q49B96 90 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms