RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 TMEM136Q6ZRR5 245 aa15.39■□□□□ 0.05
PSPC1-201ENST00000338910 ZNRF1Q8ND25 227 aa15.39■□□□□ 0.05
PSPC1-201ENST00000338910 GAL3ST2Q9H3Q3 398 aa15.39■□□□□ 0.05
PSPC1-201ENST00000338910 IGLV3-9A0A075B6K5 115 aa15.38■□□□□ 0.05
PSPC1-201ENST00000338910 NKX6-3A6NJ46 265 aa15.38■□□□□ 0.05
PSPC1-201ENST00000338910 ZNF324O75467 553 aaPredicted RBP15.38■□□□□ 0.05
PSPC1-201ENST00000338910 UCNP55089 124 aa15.38■□□□□ 0.05
PSPC1-201ENST00000338910 NIT1Q86X76 327 aa15.38■□□□□ 0.05
PSPC1-201ENST00000338910 KIAA1644Q3SXP7 199 aa15.38■□□□□ 0.05
PSPC1-201ENST00000338910 PLPPR2Q96GM1 343 aa15.38■□□□□ 0.05
PSPC1-201ENST00000338910 DPRXA6NFQ7 191 aa15.37■□□□□ 0.05
PSPC1-201ENST00000338910 TOMM40O96008 361 aa15.37■□□□□ 0.05
PSPC1-201ENST00000338910 OR10J4P0C629 311 aa15.37■□□□□ 0.05
PSPC1-201ENST00000338910 SELENOVP59797 346 aa15.37■□□□□ 0.05
PSPC1-201ENST00000338910 SAPCD1Q5SSQ6 148 aa15.37■□□□□ 0.05
PSPC1-201ENST00000338910 C22orf15Q8WYQ4 148 aa15.37■□□□□ 0.05
PSPC1-201ENST00000338910 C1orf159Q96HA4 380 aa15.37■□□□□ 0.05
PSPC1-201ENST00000338910 UHRF2Q96PU4 802 aa15.37■□□□□ 0.05
PSPC1-201ENST00000338910 SEPSECSQ9HD40 501 aaKnown RBP15.37■□□□□ 0.05
PSPC1-201ENST00000338910 POLEQ07864 2286 aa15.37■□□□□ 0.05
PSPC1-201ENST00000338910 C16orf97H3BN30 126 aa15.37■□□□□ 0.05
PSPC1-201ENST00000338910 CFHR2P36980 270 aa15.37■□□□□ 0.05
PSPC1-201ENST00000338910 RPP30P78346 268 aaKnown RBP15.37■□□□□ 0.05
PSPC1-201ENST00000338910 EFNB3Q15768 340 aa15.37■□□□□ 0.05
PSPC1-201ENST00000338910 SPATA31B1PQ5VZV4 182 aa15.37■□□□□ 0.05
PSPC1-201ENST00000338910 WFDC8Q8IUA0 241 aa15.37■□□□□ 0.05
PSPC1-201ENST00000338910 LSM4Q9Y4Z0 139 aaKnown RBP15.37■□□□□ 0.05
PSPC1-201ENST00000338910 COL8A2P25067 703 aa15.36■□□□□ 0.05
PSPC1-201ENST00000338910 KLHDC1Q8N7A1 406 aa15.36■□□□□ 0.05
PSPC1-201ENST00000338910 SSMEM1Q8WWF3 244 aa15.36■□□□□ 0.05
PSPC1-201ENST00000338910 HSD17B10Q99714 261 aaKnown RBP15.36■□□□□ 0.05
PSPC1-201ENST00000338910 SPINK4O60575 86 aa15.36■□□□□ 0.05
PSPC1-201ENST00000338910 AREGP15514 252 aa15.36■□□□□ 0.05
PSPC1-201ENST00000338910 VDAC2P45880 294 aaPredicted RBP15.36■□□□□ 0.05
PSPC1-201ENST00000338910 RPL19P84098 196 aaKnown RBP15.36■□□□□ 0.05
PSPC1-201ENST00000338910 UBE2V1Q13404 147 aa15.36■□□□□ 0.05
PSPC1-201ENST00000338910 WNT10AQ9GZT5 417 aa15.36■□□□□ 0.05
PSPC1-201ENST00000338910 K7EP13 123 aa15.35■□□□□ 0.05
PSPC1-201ENST00000338910 BMPR1BO00238 502 aa15.35■□□□□ 0.05
PSPC1-201ENST00000338910 ITGB1BP1O14713 200 aa15.35■□□□□ 0.05
PSPC1-201ENST00000338910 SPINT2O43291 252 aa15.35■□□□□ 0.05
PSPC1-201ENST00000338910 TSPOP30536 169 aa15.35■□□□□ 0.05
PSPC1-201ENST00000338910 COX19Q49B96 90 aa15.35■□□□□ 0.05
PSPC1-201ENST00000338910 PSG11Q9UQ72 335 aa15.35■□□□□ 0.05
PSPC1-201ENST00000338910 MRPS16Q9Y3D3 137 aaKnown RBP15.35■□□□□ 0.05
PSPC1-201ENST00000338910 TRAV34A0A0B4J273 112 aa15.35■□□□□ 0.05
PSPC1-201ENST00000338910 C15orf65H3BRN8 121 aa15.35■□□□□ 0.05
PSPC1-201ENST00000338910 FOXH1O75593 365 aa15.35■□□□□ 0.05
PSPC1-201ENST00000338910 LHBP01229 141 aa15.35■□□□□ 0.05
PSPC1-201ENST00000338910 SRIP30626 198 aa15.35■□□□□ 0.05
PSPC1-201ENST00000338910 RHOBP62745 196 aa15.35■□□□□ 0.05
PSPC1-201ENST00000338910 TNFAIP6P98066 277 aaPredicted RBP15.35■□□□□ 0.05
PSPC1-201ENST00000338910 CENPWQ5EE01 88 aa15.35■□□□□ 0.05
PSPC1-201ENST00000338910 COX11Q9Y6N1 276 aa15.35■□□□□ 0.05
PSPC1-201ENST00000338910 HCFC1P51610 2035 aa15.34■□□□□ 0.05
PSPC1-201ENST00000338910 MT-CO2P00403 227 aa15.34■□□□□ 0.05
PSPC1-201ENST00000338910 IGHV1-46P01743 117 aa15.34■□□□□ 0.05
PSPC1-201ENST00000338910 IGHV3-7P01780 117 aa15.34■□□□□ 0.05
PSPC1-201ENST00000338910 TMEM11P17152 192 aa15.34■□□□□ 0.05
PSPC1-201ENST00000338910 GNG4P50150 75 aa15.34■□□□□ 0.05
PSPC1-201ENST00000338910 TMEM108Q6UXF1 575 aa15.34■□□□□ 0.05
PSPC1-201ENST00000338910 C19orf35Q6ZS72 473 aa15.34■□□□□ 0.05
PSPC1-201ENST00000338910 Q6ZVH6 145 aa15.34■□□□□ 0.05
PSPC1-201ENST00000338910 GCM1Q9NP62 436 aa15.34■□□□□ 0.05
PSPC1-201ENST00000338910 HEYLQ9NQ87 328 aaPredicted RBP15.34■□□□□ 0.05
PSPC1-201ENST00000338910 CA2P00918 260 aa15.34■□□□□ 0.05
PSPC1-201ENST00000338910 RBPJQ06330 500 aa15.34■□□□□ 0.05
PSPC1-201ENST00000338910 MORN2Q502X0 79 aa15.34■□□□□ 0.05
PSPC1-201ENST00000338910 UNQ5815/PRO19632Q6UWF5 114 aa15.34■□□□□ 0.05
PSPC1-201ENST00000338910 FAM90A1Q86YD7 464 aa15.34■□□□□ 0.05
PSPC1-201ENST00000338910 DEFB108BQ8NET1 73 aa15.34■□□□□ 0.05
PSPC1-201ENST00000338910 TSKUQ8WUA8 353 aa15.34■□□□□ 0.05
PSPC1-201ENST00000338910 JKAMPQ9P055 326 aa15.34■□□□□ 0.05
PSPC1-201ENST00000338910 FAM90A9PA6NNJ1 464 aa15.33■□□□□ 0.04
PSPC1-201ENST00000338910 MGST3O14880 152 aa15.33■□□□□ 0.04
PSPC1-201ENST00000338910 SLC35B1P78383 322 aa15.33■□□□□ 0.04
PSPC1-201ENST00000338910 FAM19A2Q8N3H0 131 aa15.33■□□□□ 0.04
PSPC1-201ENST00000338910 STPG3Q8N7X2 389 aa15.33■□□□□ 0.04
PSPC1-201ENST00000338910 RNASE7Q9H1E1 156 aaKnown RBP15.33■□□□□ 0.04
PSPC1-201ENST00000338910 OSTCQ9NRP0 149 aa15.33■□□□□ 0.04
PSPC1-201ENST00000338910 HELTA6NFD8 242 aa15.33■□□□□ 0.04
PSPC1-201ENST00000338910 DLL1O00548 723 aa15.33■□□□□ 0.04
PSPC1-201ENST00000338910 HLA-DQA1P01909 254 aa15.33■□□□□ 0.04
PSPC1-201ENST00000338910 CDKN1BP46527 198 aa15.33■□□□□ 0.04
PSPC1-201ENST00000338910 HINT1P49773 126 aaPredicted RBP15.33■□□□□ 0.04
PSPC1-201ENST00000338910 LYG1Q8N1E2 194 aa15.33■□□□□ 0.04
PSPC1-201ENST00000338910 ABHD12Q8N2K0 398 aa15.33■□□□□ 0.04
PSPC1-201ENST00000338910 ZNF738Q8NE65 137 aa15.33■□□□□ 0.04
PSPC1-201ENST00000338910 OR52E5Q8NH55 327 aa15.33■□□□□ 0.04
PSPC1-201ENST00000338910 PPP1R35Q8TAP8 253 aa15.33■□□□□ 0.04
PSPC1-201ENST00000338910 NPVFQ9HCQ7 196 aa15.33■□□□□ 0.04
PSPC1-201ENST00000338910 LOC105371242A0A075B767 164 aa15.32■□□□□ 0.04
PSPC1-201ENST00000338910 AMY1AP04745 511 aa15.32■□□□□ 0.04
PSPC1-201ENST00000338910 MAJINQ3KP22 176 aa15.32■□□□□ 0.04
PSPC1-201ENST00000338910 PRAMEF5Q5TYX0 476 aa15.32■□□□□ 0.04
PSPC1-201ENST00000338910 PQLC2Q6ZP29 291 aa15.32■□□□□ 0.04
PSPC1-201ENST00000338910 RND1Q92730 232 aa15.32■□□□□ 0.04
PSPC1-201ENST00000338910 SLC35D1Q9NTN3 355 aa15.32■□□□□ 0.04
PSPC1-201ENST00000338910 RNF7Q9UBF6 113 aa15.32■□□□□ 0.04
PSPC1-201ENST00000338910 GNG12Q9UBI6 72 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms