RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 MYO7AQ13402 2215 aa10.99□□□□□ -0.65
HLCS-201ENST00000336648 ZNF831Q5JPB2 1677 aa10.99□□□□□ -0.65
HLCS-201ENST00000336648 EGR1P18146 543 aa10.99□□□□□ -0.65
HLCS-201ENST00000336648 ADMP35318 185 aa10.99□□□□□ -0.65
HLCS-201ENST00000336648 TFF3Q07654 80 aa10.99□□□□□ -0.65
HLCS-201ENST00000336648 SRSF1Q07955 248 aaKnown RBP eCLIP10.99□□□□□ -0.65
HLCS-201ENST00000336648 Q5BKY6 102 aa10.99□□□□□ -0.65
HLCS-201ENST00000336648 C19orf48Q6RUI8 117 aa10.99□□□□□ -0.65
HLCS-201ENST00000336648 OVOL2Q9BRP0 275 aa10.99□□□□□ -0.65
HLCS-201ENST00000336648 RP1L1Q8IWN7 2480 aaPredicted RBP10.99□□□□□ -0.65
HLCS-201ENST00000336648 LOC101059948A0A1B0GTJ6 334 aa10.99□□□□□ -0.65
HLCS-201ENST00000336648 CMC4P56277 68 aaPredicted RBP10.99□□□□□ -0.65
HLCS-201ENST00000336648 C9orf153Q5TBE3 101 aa10.99□□□□□ -0.65
HLCS-201ENST00000336648 TMEM42Q69YG0 159 aa10.99□□□□□ -0.65
HLCS-201ENST00000336648 OR13A1Q8NGR1 328 aa10.99□□□□□ -0.65
HLCS-201ENST00000336648 A6NNC1 897 aa10.98□□□□□ -0.65
HLCS-201ENST00000336648 MPZP25189 248 aa10.98□□□□□ -0.65
HLCS-201ENST00000336648 FAM89BQ8N5H3 189 aa10.98□□□□□ -0.65
HLCS-201ENST00000336648 LINC01587Q99440 93 aa10.98□□□□□ -0.65
HLCS-201ENST00000336648 ZP1P60852 638 aa10.98□□□□□ -0.65
HLCS-201ENST00000336648 LINC00114Q6XXX2 140 aa10.98□□□□□ -0.65
HLCS-201ENST00000336648 COQ2Q96H96 371 aa10.98□□□□□ -0.65
HLCS-201ENST00000336648 LY75O60449 1722 aa10.98□□□□□ -0.65
HLCS-201ENST00000336648 NBR2O15453 112 aa10.98□□□□□ -0.65
HLCS-201ENST00000336648 IGFBP3P17936 291 aaPredicted RBP10.98□□□□□ -0.65
HLCS-201ENST00000336648 CSRP2Q16527 193 aa10.98□□□□□ -0.65
HLCS-201ENST00000336648 ARID1AO14497 2285 aa10.98□□□□□ -0.65
HLCS-201ENST00000336648 IGKV3D-20A0A0C4DH25 116 aa10.98□□□□□ -0.65
HLCS-201ENST00000336648 A0A0G2JK05 382 aa10.98□□□□□ -0.65
HLCS-201ENST00000336648 IGKV3-20P01619 116 aa10.98□□□□□ -0.65
HLCS-201ENST00000336648 MESP2Q0VG99 397 aa10.98□□□□□ -0.65
HLCS-201ENST00000336648 LAIR2Q6ISS4 152 aa10.98□□□□□ -0.65
HLCS-201ENST00000336648 TNFRSF14Q92956 283 aa10.98□□□□□ -0.65
HLCS-201ENST00000336648 C18orf12Q96KH6 178 aa10.98□□□□□ -0.65
HLCS-201ENST00000336648 DLEC1Q9Y238 1755 aa10.97□□□□□ -0.65
HLCS-201ENST00000336648 ITLN2Q8WWU7 325 aaPredicted RBP10.97□□□□□ -0.65
HLCS-201ENST00000336648 PTPRZ1P23471 2315 aaPredicted RBP10.97□□□□□ -0.65
HLCS-201ENST00000336648 OR9G4Q8NGQ1 327 aa10.97□□□□□ -0.65
HLCS-201ENST00000336648 SMPXQ9UHP9 88 aa10.97□□□□□ -0.65
HLCS-201ENST00000336648 TRGV11A0A075B6L2 103 aa10.97□□□□□ -0.65
HLCS-201ENST00000336648 C17orf100A8MU93 164 aa10.97□□□□□ -0.65
HLCS-201ENST00000336648 FAM168AQ92567 244 aa10.97□□□□□ -0.65
HLCS-201ENST00000336648 C15orf61A6NNL5 157 aa10.97□□□□□ -0.65
HLCS-201ENST00000336648 MORN3Q6PF18 240 aaPredicted RBP10.97□□□□□ -0.65
HLCS-201ENST00000336648 CHCHD1Q96BP2 118 aaKnown RBP10.97□□□□□ -0.65
HLCS-201ENST00000336648 MIR17HGQ75NE6 70 aa10.97□□□□□ -0.65
HLCS-201ENST00000336648 ATP5L2Q7Z4Y8 100 aa10.97□□□□□ -0.65
HLCS-201ENST00000336648 DTX2Q86UW9 622 aa10.97□□□□□ -0.65
HLCS-201ENST00000336648 NUP214P35658 2090 aaPredicted RBP10.96□□□□□ -0.65
HLCS-201ENST00000336648 KIF13BQ9NQT8 1826 aa10.96□□□□□ -0.65
HLCS-201ENST00000336648 DLEU1O43261 78 aa10.96□□□□□ -0.65
HLCS-201ENST00000336648 SPINK8P0C7L1 97 aa10.96□□□□□ -0.65
HLCS-201ENST00000336648 RPL23P62829 140 aaKnown RBP10.96□□□□□ -0.65
HLCS-201ENST00000336648 GTSF1LQ9H1H1 148 aa10.96□□□□□ -0.65
HLCS-201ENST00000336648 MSGN1A6NI15 193 aa10.96□□□□□ -0.65
HLCS-201ENST00000336648 HIGD1CA8MV81 97 aa10.96□□□□□ -0.65
HLCS-201ENST00000336648 TMEM238C9JI98 176 aa10.96□□□□□ -0.65
HLCS-201ENST00000336648 F2Z2F3 143 aa10.96□□□□□ -0.65
HLCS-201ENST00000336648 ATP5G3P48201 142 aa10.96□□□□□ -0.65
HLCS-201ENST00000336648 SRSF7Q16629 238 aaKnown RBP eCLIP10.96□□□□□ -0.65
HLCS-201ENST00000336648 GATD1Q8NB37 220 aa10.96□□□□□ -0.65
HLCS-201ENST00000336648 CST9LQ9H4G1 147 aa10.96□□□□□ -0.65
HLCS-201ENST00000336648 FOCADQ5VW36 1801 aa10.96□□□□□ -0.65
HLCS-201ENST00000336648 TRGV2A0A075B6R0 118 aa10.96□□□□□ -0.65
HLCS-201ENST00000336648 C2orf82Q6UX34 121 aa10.96□□□□□ -0.65
HLCS-201ENST00000336648 C1QL2Q7Z5L3 287 aa10.96□□□□□ -0.65
HLCS-201ENST00000336648 FDCSPQ8NFU4 85 aa10.96□□□□□ -0.65
HLCS-201ENST00000336648 A0A1B0GTI1 187 aa10.96□□□□□ -0.66
HLCS-201ENST00000336648 IGLV3-19P01714 112 aa10.96□□□□□ -0.66
HLCS-201ENST00000336648 RNASE4P34096 147 aaKnown RBP10.96□□□□□ -0.66
HLCS-201ENST00000336648 LINC01560Q8TB33 94 aa10.96□□□□□ -0.66
HLCS-201ENST00000336648 TMEM167AQ8TBQ9 72 aa10.96□□□□□ -0.66
HLCS-201ENST00000336648 LAMTOR3Q9UHA4 124 aa10.96□□□□□ -0.66
HLCS-201ENST00000336648 RNF222A6NCQ9 220 aa10.96□□□□□ -0.66
HLCS-201ENST00000336648 PRR32B1ATL7 298 aa10.96□□□□□ -0.66
HLCS-201ENST00000336648 CCL1P22362 96 aa10.95□□□□□ -0.66
HLCS-201ENST00000336648 TPTE2P1Q5T6R2 138 aa10.95□□□□□ -0.66
HLCS-201ENST00000336648 CLEC19AQ6UXS0 136 aa10.95□□□□□ -0.66
HLCS-201ENST00000336648 FAM216BQ8N7L0 139 aa10.95□□□□□ -0.66
HLCS-201ENST00000336648 UBE2CO00762 179 aa10.95□□□□□ -0.66
HLCS-201ENST00000336648 IGHV3-48P01763 117 aa10.95□□□□□ -0.66
HLCS-201ENST00000336648 GNB1LQ9BYB4 327 aa10.95□□□□□ -0.66
HLCS-201ENST00000336648 TCRBV4S1A1TA0A5B7 111 aa10.95□□□□□ -0.66
HLCS-201ENST00000336648 GFRA3O60609 400 aa10.95□□□□□ -0.66
HLCS-201ENST00000336648 PSG7Q13046 419 aa10.95□□□□□ -0.66
HLCS-201ENST00000336648 OVOL1O14753 267 aa10.95□□□□□ -0.66
HLCS-201ENST00000336648 PRSS22Q9GZN4 317 aa10.95□□□□□ -0.66
HLCS-201ENST00000336648 ASCC3Q8N3C0 2202 aaKnown RBP10.94□□□□□ -0.66
HLCS-201ENST00000336648 IGHV3-35A0A0C4DH35 117 aa10.94□□□□□ -0.66
HLCS-201ENST00000336648 BSPH1Q075Z2 132 aa10.94□□□□□ -0.66
HLCS-201ENST00000336648 DLX4Q92988 240 aaPredicted RBP10.94□□□□□ -0.66
HLCS-201ENST00000336648 TNFSF13O75888 250 aa10.94□□□□□ -0.66
HLCS-201ENST00000336648 ZNF415Q09FC8 603 aa10.94□□□□□ -0.66
HLCS-201ENST00000336648 RNASE6Q93091 150 aaKnown RBP10.94□□□□□ -0.66
HLCS-201ENST00000336648 RNF125Q96EQ8 232 aa10.94□□□□□ -0.66
HLCS-201ENST00000336648 DPH3P1Q9H4G8 78 aa10.94□□□□□ -0.66
HLCS-201ENST00000336648 COLQQ9Y215 455 aaPredicted RBP10.94□□□□□ -0.66
HLCS-201ENST00000336648 MUC21A0A0G2JKD1 596 aa10.94□□□□□ -0.66
HLCS-201ENST00000336648 MUC21A0A140T8X8 626 aa10.94□□□□□ -0.66
HLCS-201ENST00000336648 MUC21Q5SSG8 566 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms