RNA–Protein interactions for RNA: ENST00000335972.10

UBA1-201, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBA1, Length 3,559 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-201ENST00000335972 SGK494Q96LW2 274 aa12.05□□□□□ -0.48
UBA1-201ENST00000335972 RNASE7Q9H1E1 156 aaKnown RBP12.05□□□□□ -0.48
UBA1-201ENST00000335972 SLC45A2Q9UMX9 530 aa12.05□□□□□ -0.48
UBA1-201ENST00000335972 SPTAN1Q13813 2472 aaKnown RBP12.05□□□□□ -0.48
UBA1-201ENST00000335972 CACNA1BQ00975 2339 aa12.05□□□□□ -0.48
UBA1-201ENST00000335972 SLC25A17O43808 307 aa12.05□□□□□ -0.48
UBA1-201ENST00000335972 RNASE2P10153 161 aaKnown RBP12.05□□□□□ -0.48
UBA1-201ENST00000335972 SUMO1P63165 101 aaKnown RBP12.05□□□□□ -0.48
UBA1-201ENST00000335972 HCP5Q6MZN7 132 aa12.05□□□□□ -0.48
UBA1-201ENST00000335972 MRPL36Q9P0J6 103 aaKnown RBP12.05□□□□□ -0.48
UBA1-201ENST00000335972 LINC00312Q9Y6C7 94 aa12.05□□□□□ -0.48
UBA1-201ENST00000335972 CHD8Q9HCK8 2581 aa12.05□□□□□ -0.48
UBA1-201ENST00000335972 WNK2Q9Y3S1 2297 aa12.05□□□□□ -0.48
UBA1-201ENST00000335972 H0YJW9 148 aa12.04□□□□□ -0.48
UBA1-201ENST00000335972 SRP14P37108 136 aaKnown RBP12.04□□□□□ -0.48
UBA1-201ENST00000335972 IGF2-ASQ6U949 168 aa12.04□□□□□ -0.48
UBA1-201ENST00000335972 PQLC2Q6ZP29 291 aa12.04□□□□□ -0.48
UBA1-201ENST00000335972 MRPL41Q8IXM3 137 aaKnown RBP12.04□□□□□ -0.48
UBA1-201ENST00000335972 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.04□□□□□ -0.48
UBA1-201ENST00000335972 NCOR2Q9Y618 2525 aa12.04□□□□□ -0.48
UBA1-201ENST00000335972 PYYP10082 97 aa12.04□□□□□ -0.48
UBA1-201ENST00000335972 RPL29P47914 159 aaKnown RBP12.04□□□□□ -0.48
UBA1-201ENST00000335972 TEX36Q5VZQ5 186 aa12.04□□□□□ -0.48
UBA1-201ENST00000335972 TMEM106BQ9NUM4 274 aa12.04□□□□□ -0.48
UBA1-201ENST00000335972 ELOVL5Q9NYP7 299 aa12.04□□□□□ -0.48
UBA1-201ENST00000335972 COL12A1Q99715 3063 aa12.04□□□□□ -0.48
UBA1-201ENST00000335972 TMEM178BH3BS89 294 aa12.04□□□□□ -0.48
UBA1-201ENST00000335972 APOA2P02652 100 aa12.04□□□□□ -0.48
UBA1-201ENST00000335972 GZMBP10144 247 aa12.04□□□□□ -0.48
UBA1-201ENST00000335972 ADMP35318 185 aa12.04□□□□□ -0.48
UBA1-201ENST00000335972 ERVFC1-1P60608 527 aa12.04□□□□□ -0.48
UBA1-201ENST00000335972 LINC01560Q8TB33 94 aa12.04□□□□□ -0.48
UBA1-201ENST00000335972 FLYWCH2Q96CP2 140 aaKnown RBP12.04□□□□□ -0.48
UBA1-201ENST00000335972 GAL3ST2Q9H3Q3 398 aa12.04□□□□□ -0.48
UBA1-201ENST00000335972 TGOLN2O43493 480 aa12.03□□□□□ -0.48
UBA1-201ENST00000335972 LY6HO94772 140 aa12.03□□□□□ -0.48
UBA1-201ENST00000335972 CA1P00915 261 aaPredicted RBP12.03□□□□□ -0.48
UBA1-201ENST00000335972 MGST1P10620 155 aaKnown RBP12.03□□□□□ -0.48
UBA1-201ENST00000335972 CNTFRP26992 372 aa12.03□□□□□ -0.48
UBA1-201ENST00000335972 TDGF1P3P51864 188 aa12.03□□□□□ -0.48
UBA1-201ENST00000335972 WT1-ASQ06250 92 aa12.03□□□□□ -0.48
UBA1-201ENST00000335972 CENPWQ5EE01 88 aa12.03□□□□□ -0.48
UBA1-201ENST00000335972 RAB9BQ9NP90 201 aa12.03□□□□□ -0.48
UBA1-201ENST00000335972 H3BTX0 84 aa12.03□□□□□ -0.48
UBA1-201ENST00000335972 NDUFB3O43676 98 aa12.03□□□□□ -0.48
UBA1-201ENST00000335972 CNN1P51911 297 aaKnown RBP12.03□□□□□ -0.48
UBA1-201ENST00000335972 RPL8P62917 257 aaKnown RBP12.03□□□□□ -0.48
UBA1-201ENST00000335972 NPIPB3Q92617 1050 aa12.03□□□□□ -0.48
UBA1-201ENST00000335972 GRNP28799 593 aaKnown RBP12.03□□□□□ -0.48
UBA1-201ENST00000335972 RPL15P61313 204 aaKnown RBP12.03□□□□□ -0.48
UBA1-201ENST00000335972 DEFA6Q01524 100 aa12.03□□□□□ -0.48
UBA1-201ENST00000335972 NUP37Q8NFH4 326 aa12.03□□□□□ -0.48
UBA1-201ENST00000335972 FNDC4Q9H6D8 234 aaPredicted RBP12.03□□□□□ -0.48
UBA1-201ENST00000335972 GGTLC3B5MD39 225 aa12.02□□□□□ -0.48
UBA1-201ENST00000335972 E7EQL1 145 aa12.02□□□□□ -0.48
UBA1-201ENST00000335972 ITGB1BP1O14713 200 aa12.02□□□□□ -0.48
UBA1-201ENST00000335972 IER3P46695 156 aa12.02□□□□□ -0.48
UBA1-201ENST00000335972 TMEM144Q7Z5S9 345 aa12.02□□□□□ -0.48
UBA1-201ENST00000335972 ZNF430Q9H8G1 570 aaPredicted RBP12.02□□□□□ -0.48
UBA1-201ENST00000335972 F2Z2F3 143 aa12.02□□□□□ -0.49
UBA1-201ENST00000335972 KIAA1644Q3SXP7 199 aa12.02□□□□□ -0.49
UBA1-201ENST00000335972 ZNF833PQ6ZTB9 187 aa12.02□□□□□ -0.49
UBA1-201ENST00000335972 OR8I2Q8N0Y5 310 aa12.02□□□□□ -0.49
UBA1-201ENST00000335972 CORO2AQ92828 525 aa12.02□□□□□ -0.49
UBA1-201ENST00000335972 TRAV34A0A0B4J273 112 aa12.02□□□□□ -0.49
UBA1-201ENST00000335972 MOSP00540 346 aa12.02□□□□□ -0.49
UBA1-201ENST00000335972 RNASE6Q93091 150 aaKnown RBP12.02□□□□□ -0.49
UBA1-201ENST00000335972 GSX1Q9H4S2 264 aaPredicted RBP12.02□□□□□ -0.49
UBA1-201ENST00000335972 SERTAD4Q9NUC0 356 aa12.02□□□□□ -0.49
UBA1-201ENST00000335972 GPX4P36969 197 aaPredicted RBP12.01□□□□□ -0.49
UBA1-201ENST00000335972 EAF1Q96JC9 268 aaPredicted RBP12.01□□□□□ -0.49
UBA1-201ENST00000335972 HELTA6NFD8 242 aa12.01□□□□□ -0.49
UBA1-201ENST00000335972 CGB1A6NKQ9 187 aa12.01□□□□□ -0.49
UBA1-201ENST00000335972 LRRC10Q5BKY1 277 aa12.01□□□□□ -0.49
UBA1-201ENST00000335972 RPH3ALQ9UNE2 315 aa12.01□□□□□ -0.49
UBA1-201ENST00000335972 FAM90A27PA6NNH2 459 aa12□□□□□ -0.49
UBA1-201ENST00000335972 COX7A1P24310 79 aa12□□□□□ -0.49
UBA1-201ENST00000335972 LOXP28300 417 aaPredicted RBP12□□□□□ -0.49
UBA1-201ENST00000335972 GNG4P50150 75 aa12□□□□□ -0.49
UBA1-201ENST00000335972 CD69Q07108 199 aa12□□□□□ -0.49
UBA1-201ENST00000335972 POU2AF1Q16633 256 aa12□□□□□ -0.49
UBA1-201ENST00000335972 OR5G3P0C626 314 aa12□□□□□ -0.49
UBA1-201ENST00000335972 OR1L8Q8NGR8 309 aa12□□□□□ -0.49
UBA1-201ENST00000335972 SSBP3Q9BWW4 388 aaPredicted RBP12□□□□□ -0.49
UBA1-201ENST00000335972 RAB4BP61018 213 aa12□□□□□ -0.49
UBA1-201ENST00000335972 SPACA3Q8IXA5 215 aa12□□□□□ -0.49
UBA1-201ENST00000335972 OR5AU1Q8NGC0 362 aa12□□□□□ -0.49
UBA1-201ENST00000335972 MISP3Q96FF7 219 aa12□□□□□ -0.49
UBA1-201ENST00000335972 NDUFA4L2Q9NRX3 87 aa12□□□□□ -0.49
UBA1-201ENST00000335972 BET1LQ9NYM9 111 aa12□□□□□ -0.49
UBA1-201ENST00000335972 TECRQ9NZ01 308 aaKnown RBP12□□□□□ -0.49
UBA1-201ENST00000335972 A0A087X0M5 115 aa11.99□□□□□ -0.49
UBA1-201ENST00000335972 A0A1B0GX30 115 aa11.99□□□□□ -0.49
UBA1-201ENST00000335972 SCGB1D1O95968 90 aa11.99□□□□□ -0.49
UBA1-201ENST00000335972 MT-CO2P00403 227 aa11.99□□□□□ -0.49
UBA1-201ENST00000335972 UBE2L3P68036 154 aaKnown RBP11.99□□□□□ -0.49
UBA1-201ENST00000335972 ERHP84090 104 aaKnown RBP11.99□□□□□ -0.49
UBA1-201ENST00000335972 C3orf36Q3SXR2 165 aa11.99□□□□□ -0.49
UBA1-201ENST00000335972 ASCL5Q7RTU5 278 aa11.99□□□□□ -0.49
UBA1-201ENST00000335972 TGIF2LXQ8IUE1 241 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms