RNA–Protein interactions for RNA: ENST00000335727.13

TNRC6B-202, Transcript of trinucleotide repeat containing 6B, humanhuman

TSL 1 (best) BASIC

Gene TNRC6B, Length 17,933 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6B-202ENST00000335727 TNFSF14O43557 240 aa4.55□□□□□ -1.68
TNRC6B-202ENST00000335727 LDB3O75112 727 aa4.55□□□□□ -1.68
TNRC6B-202ENST00000335727 IGKCP01834 107 aa4.55□□□□□ -1.68
TNRC6B-202ENST00000335727 APOBEC1P41238 236 aaKnown RBP4.55□□□□□ -1.68
TNRC6B-202ENST00000335727 SNRPD3P62318 126 aaKnown RBP4.55□□□□□ -1.68
TNRC6B-202ENST00000335727 RNPS1Q15287 305 aaKnown RBP4.55□□□□□ -1.68
TNRC6B-202ENST00000335727 HILPDAQ9Y5L2 63 aa4.55□□□□□ -1.68
TNRC6B-202ENST00000335727 VSIG2Q96IQ7 327 aa4.55□□□□□ -1.68
TNRC6B-202ENST00000335727 CYTL1Q9NRR1 136 aa4.55□□□□□ -1.68
TNRC6B-202ENST00000335727 PRR33A8MZF0 331 aa4.55□□□□□ -1.68
TNRC6B-202ENST00000335727 FCGR3BO75015 233 aa4.55□□□□□ -1.68
TNRC6B-202ENST00000335727 PTGDSP41222 190 aa4.55□□□□□ -1.68
TNRC6B-202ENST00000335727 TBR1Q16650 682 aa4.55□□□□□ -1.68
TNRC6B-202ENST00000335727 TMEM252Q8N6L7 170 aa4.55□□□□□ -1.68
TNRC6B-202ENST00000335727 COX20Q5RI15 118 aa4.55□□□□□ -1.68
TNRC6B-202ENST00000335727 FAM159AQ6UWV7 190 aa4.55□□□□□ -1.68
TNRC6B-202ENST00000335727 EEF1AKMT3Q96AZ1 226 aa4.55□□□□□ -1.68
TNRC6B-202ENST00000335727 RNASE1P07998 156 aaKnown RBP4.55□□□□□ -1.68
TNRC6B-202ENST00000335727 NNATQ16517 81 aa4.55□□□□□ -1.68
TNRC6B-202ENST00000335727 C1orf220Q5T0J3 134 aa4.55□□□□□ -1.68
TNRC6B-202ENST00000335727 FAM214BQ7L5A3 538 aa4.55□□□□□ -1.68
TNRC6B-202ENST00000335727 FAM19A2Q8N3H0 131 aa4.55□□□□□ -1.68
TNRC6B-202ENST00000335727 NT5CQ8TCD5 201 aa4.55□□□□□ -1.68
TNRC6B-202ENST00000335727 NCOA6Q14686 2063 aaPredicted RBP4.55□□□□□ -1.68
TNRC6B-202ENST00000335727 TNXAQ16473 311 aa4.55□□□□□ -1.68
TNRC6B-202ENST00000335727 LINC00346Q8IVM7 164 aa4.55□□□□□ -1.68
TNRC6B-202ENST00000335727 FGF11Q92914 225 aa4.55□□□□□ -1.68
TNRC6B-202ENST00000335727 SMIM28A0A1B0GU29 152 aa4.55□□□□□ -1.68
TNRC6B-202ENST00000335727 KLK6Q92876 244 aa4.55□□□□□ -1.68
TNRC6B-202ENST00000335727 SNRNP40Q96DI7 357 aaKnown RBP4.55□□□□□ -1.68
TNRC6B-202ENST00000335727 PRSS37A4D1T9 235 aa4.54□□□□□ -1.68
TNRC6B-202ENST00000335727 UPK3AO75631 287 aa4.54□□□□□ -1.68
TNRC6B-202ENST00000335727 MYF5P13349 255 aa4.54□□□□□ -1.68
TNRC6B-202ENST00000335727 GTSCR1Q86UQ5 136 aa4.54□□□□□ -1.68
TNRC6B-202ENST00000335727 SLC25A39Q9BZJ4 359 aaPredicted RBP4.54□□□□□ -1.68
TNRC6B-202ENST00000335727 C11orf44Q8N8P7 122 aa4.54□□□□□ -1.68
TNRC6B-202ENST00000335727 ST8SIA1Q92185 356 aa4.54□□□□□ -1.68
TNRC6B-202ENST00000335727 RNF183Q96D59 192 aa4.54□□□□□ -1.68
TNRC6B-202ENST00000335727 COX6B1P14854 86 aa4.54□□□□□ -1.68
TNRC6B-202ENST00000335727 ARHGAP5-AS1Q96IT6 56 aa4.54□□□□□ -1.68
TNRC6B-202ENST00000335727 PEMTQ9UBM1 199 aa4.54□□□□□ -1.68
TNRC6B-202ENST00000335727 H0YJW9 148 aa4.54□□□□□ -1.68
TNRC6B-202ENST00000335727 GCSAMQ8N6F7 178 aa4.54□□□□□ -1.68
TNRC6B-202ENST00000335727 DUTP33316 252 aaKnown RBP4.54□□□□□ -1.68
TNRC6B-202ENST00000335727 ORMDL3Q8N138 153 aa4.54□□□□□ -1.68
TNRC6B-202ENST00000335727 LILRA3Q8N6C8 439 aaPredicted RBP4.54□□□□□ -1.68
TNRC6B-202ENST00000335727 OR52N5Q8NH56 324 aa4.54□□□□□ -1.68
TNRC6B-202ENST00000335727 CLEC4DQ8WXI8 215 aa4.54□□□□□ -1.68
TNRC6B-202ENST00000335727 TMEM54Q969K7 222 aa4.54□□□□□ -1.68
TNRC6B-202ENST00000335727 SUSD3Q96L08 255 aa4.54□□□□□ -1.68
TNRC6B-202ENST00000335727 KLK13Q9UKR3 277 aa4.54□□□□□ -1.68
TNRC6B-202ENST00000335727 PPYP01298 95 aa4.54□□□□□ -1.68
TNRC6B-202ENST00000335727 SHISA2Q6UWI4 295 aa4.54□□□□□ -1.68
TNRC6B-202ENST00000335727 CXXC4Q9H2H0 198 aa4.54□□□□□ -1.68
TNRC6B-202ENST00000335727 CFPP27918 469 aa4.54□□□□□ -1.68
TNRC6B-202ENST00000335727 CCL20P78556 96 aa4.54□□□□□ -1.68
TNRC6B-202ENST00000335727 GP6Q9HCN6 339 aa4.54□□□□□ -1.68
TNRC6B-202ENST00000335727 DENND4CQ5VZ89 1909 aa4.54□□□□□ -1.68
TNRC6B-202ENST00000335727 RUNX3Q13761 415 aa4.54□□□□□ -1.68
TNRC6B-202ENST00000335727 SCAMP4Q969E2 229 aa4.54□□□□□ -1.68
TNRC6B-202ENST00000335727 CXorf51AA0A1B0GTR3 108 aa4.54□□□□□ -1.68
TNRC6B-202ENST00000335727 SAP30O75446 220 aa4.54□□□□□ -1.68
TNRC6B-202ENST00000335727 FAM90A2PQ658T7 463 aa4.54□□□□□ -1.68
TNRC6B-202ENST00000335727 RPRMLQ8N4K4 120 aa4.54□□□□□ -1.68
TNRC6B-202ENST00000335727 ARFGEF3Q5TH69 2177 aa4.54□□□□□ -1.68
TNRC6B-202ENST00000335727 FAM231DQ6ZW35 169 aa4.54□□□□□ -1.68
TNRC6B-202ENST00000335727 WIPF2Q8TF74 440 aaPredicted RBP4.54□□□□□ -1.68
TNRC6B-202ENST00000335727 CYB5D2Q8WUJ1 264 aa4.54□□□□□ -1.68
TNRC6B-202ENST00000335727 NRXN3Q9Y4C0 1643 aa4.54□□□□□ -1.68
TNRC6B-202ENST00000335727 TMEM78Q5T7P6 136 aa4.54□□□□□ -1.68
TNRC6B-202ENST00000335727 DTX1Q86Y01 620 aa4.54□□□□□ -1.68
TNRC6B-202ENST00000335727 EXPH5Q8NEV8 1989 aa4.54□□□□□ -1.68
TNRC6B-202ENST00000335727 CD3EP07766 207 aa4.54□□□□□ -1.68
TNRC6B-202ENST00000335727 C8orf88P0DMB2 117 aa4.54□□□□□ -1.68
TNRC6B-202ENST00000335727 ZNF83P51522 516 aa4.54□□□□□ -1.68
TNRC6B-202ENST00000335727 CECR9P0C854 216 aa4.54□□□□□ -1.68
TNRC6B-202ENST00000335727 SPANXN1Q5VSR9 72 aa4.54□□□□□ -1.68
TNRC6B-202ENST00000335727 ZNF121P58317 390 aaPredicted RBP4.54□□□□□ -1.68
TNRC6B-202ENST00000335727 BRK1Q8WUW1 75 aa4.54□□□□□ -1.68
TNRC6B-202ENST00000335727 DNAJB12Q9NXW2 375 aaKnown RBP4.54□□□□□ -1.68
TNRC6B-202ENST00000335727 A0A087X0K7 114 aa4.53□□□□□ -1.68
TNRC6B-202ENST00000335727 METRNLQ641Q3 311 aa4.53□□□□□ -1.68
TNRC6B-202ENST00000335727 TRAV24A0A0B4J272 114 aa4.53□□□□□ -1.68
TNRC6B-202ENST00000335727 GZMMP51124 257 aa4.53□□□□□ -1.68
TNRC6B-202ENST00000335727 CDKN3Q16667 212 aa4.53□□□□□ -1.68
TNRC6B-202ENST00000335727 YPEL2Q96QA6 119 aa4.53□□□□□ -1.68
TNRC6B-202ENST00000335727 PRNDQ9UKY0 176 aa4.53□□□□□ -1.68
TNRC6B-202ENST00000335727 TMEM243Q9BU79 118 aa4.53□□□□□ -1.68
TNRC6B-202ENST00000335727 CNTFRP26992 372 aa4.53□□□□□ -1.68
TNRC6B-202ENST00000335727 LIM2P55344 173 aa4.53□□□□□ -1.68
TNRC6B-202ENST00000335727 SPRYD7Q5W111 196 aa4.53□□□□□ -1.68
TNRC6B-202ENST00000335727 C15orf53Q8NAA6 179 aa4.53□□□□□ -1.68
TNRC6B-202ENST00000335727 PYGO2Q9BRQ0 406 aa4.53□□□□□ -1.68
TNRC6B-202ENST00000335727 PNRC2Q9NPJ4 139 aaKnown RBP4.53□□□□□ -1.68
TNRC6B-202ENST00000335727 GZMHP20718 246 aa4.53□□□□□ -1.68
TNRC6B-202ENST00000335727 LEPP41159 167 aa4.53□□□□□ -1.68
TNRC6B-202ENST00000335727 KLF5Q13887 457 aaPredicted RBP4.53□□□□□ -1.68
TNRC6B-202ENST00000335727 SMRP1Q8NCR6 262 aa4.53□□□□□ -1.68
TNRC6B-202ENST00000335727 A0A1W2PQU0 124 aa4.53□□□□□ -1.68
TNRC6B-202ENST00000335727 TAX1BP3O14907 124 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms