RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 NQO2P16083 231 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 CRYBB3P26998 211 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 PRDX2P32119 198 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 RFX2P48378 723 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 FHITP49789 147 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 YPEL3P61236 119 aaPredicted RBP0.98□□□□□ -2.25
LINC00643-201ENST00000334389 NUTF2P61970 127 aaKnown RBP0.98□□□□□ -2.25
LINC00643-201ENST00000334389 Q0VG73 95 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 GAMTQ14353 236 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 TMEM187Q14656 261 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 OR7A5Q15622 319 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 ODF3L2Q3SX64 289 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 FAM106AQ4KMX7 169 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 CLVS1Q8IUQ0 354 aaPredicted RBP0.98□□□□□ -2.25
LINC00643-201ENST00000334389 C8orf59Q8N0T1 100 aaPredicted RBP0.98□□□□□ -2.25
LINC00643-201ENST00000334389 BATF2Q8N1L9 274 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 PNKDQ8N490 385 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 NANOGP1Q8N7R0 232 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 OR10G2Q8NGC3 310 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 OR51A7Q8NH64 312 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 OR10A6Q8NH74 314 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 ZNF563Q8TA94 476 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 GLYATL2Q8WU03 294 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 SMIM19Q96E16 107 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 APOL4Q9BPW4 351 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 SPXQ9BT56 116 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 SPANXDQ9BXN6 97 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 SAV1Q9H4B6 383 aaPredicted RBP0.98□□□□□ -2.25
LINC00643-201ENST00000334389 NPVFQ9HCQ7 196 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 TMEM242Q9NWH2 141 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 PSORS1C1Q9UIG5 152 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 RBMX2Q9Y388 322 aaKnown RBP0.98□□□□□ -2.25
LINC00643-201ENST00000334389 MUC4Q99102 2169 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 A0A1B0GU03 582 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 PLAC8L1A1L4L8 177 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 FAM231BA6NCW3 169 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 HELTA6NFD8 242 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 CCDC160A6NGH7 325 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 FAM90A26D6RGX4 464 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 F5H5P2 479 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 G3V3Y1 287 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 M0R135 149 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 TNFRSF11BO00300 401 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 TAAR5O14804 337 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 YIF1AO95070 293 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 DUSP14O95147 198 aaKnown RBP0.98□□□□□ -2.25
LINC00643-201ENST00000334389 TSPAN13O95857 204 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 APOA1P02647 267 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 IL5P05113 134 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 HSMCR30P0CW71 290 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 TMEM225BP0DP42 221 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 SLC25A4P12235 298 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 IL7P13232 177 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 CDKN2AP42771 156 aaKnown RBP0.98□□□□□ -2.25
LINC00643-201ENST00000334389 NME5P56597 212 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 HOXC5Q00444 222 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 OPCMLQ14982 345 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 RSU1Q15404 277 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 OR2G6Q5TZ20 316 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 TMEM225Q6GV28 225 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 DPPA3Q6W0C5 159 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 NOXA1Q86UR1 476 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 COMMD2Q86X83 199 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 FAM219AQ8IW50 185 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 PQLC1Q8N2U9 271 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 RNF175Q8N4F7 328 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 C15orf54Q8N8G6 183 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 OR9Q2Q8NGE9 314 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 OR6M1Q8NGM8 313 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 OR8D4Q8NGM9 314 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 OR10G8Q8NGN5 311 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 OR4A4PQ8NGN8 299 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 OR13C8Q8NGS7 320 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 OR1L1Q8NH94 360 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 ST8SIA4Q92187 359 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 RBPMSQ93062 196 aaKnown RBP0.98□□□□□ -2.25
LINC00643-201ENST00000334389 SLC25A46Q96AG3 418 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 SLAMF6Q96DU3 332 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 ABHD1Q96SE0 405 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 DCUN1D5Q9BTE7 237 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 HINT2Q9BX68 163 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 AUNIPQ9H7T9 357 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 NDUFB11Q9NX14 153 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 KCNIP1Q9NZI2 227 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 OR5AC2Q9NZP5 309 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 ABRACLQ9P1F3 81 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 DAPK2Q9UIK4 370 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 COPS3Q9UNS2 423 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 POMPQ9Y244 141 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 DCHS2Q6V1P9 2916 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 CSMD1Q96PZ7 3565 aa0.97□□□□□ -2.25
LINC00643-201ENST00000334389 IGHV7-4-1A0A0J9YVY3 117 aa0.97□□□□□ -2.25
LINC00643-201ENST00000334389 TMEM269A0A1B0GVZ9 245 aa0.97□□□□□ -2.25
LINC00643-201ENST00000334389 hCG_1807616A0A1W2PRN6 198 aa0.97□□□□□ -2.25
LINC00643-201ENST00000334389 A0A1W2PS18 150 aa0.97□□□□□ -2.25
LINC00643-201ENST00000334389 TMEM233B4DJY2 109 aa0.97□□□□□ -2.25
LINC00643-201ENST00000334389 RAB27BO00194 218 aa0.97□□□□□ -2.25
LINC00643-201ENST00000334389 CDC42EP2O14613 210 aa0.97□□□□□ -2.25
LINC00643-201ENST00000334389 HSD17B6O14756 317 aa0.97□□□□□ -2.25
LINC00643-201ENST00000334389 CRXO43186 299 aaPredicted RBP0.97□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms