RNA–Protein interactions for RNA: ENST00000333990.10

POLR1B-202, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 4,376 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-202ENST00000333990 PRB3Q04118 309 aaPredicted RBP9.25□□□□□ -0.93
POLR1B-202ENST00000333990 PRSS8Q16651 343 aa9.25□□□□□ -0.93
POLR1B-202ENST00000333990 C2orf68Q2NKX9 166 aa9.25□□□□□ -0.93
POLR1B-202ENST00000333990 RNF212Q495C1 297 aa9.25□□□□□ -0.93
POLR1B-202ENST00000333990 KLF2Q9Y5W3 355 aaPredicted RBP9.25□□□□□ -0.93
POLR1B-202ENST00000333990 BUB1B-PAK6H3BSN5 160 aa9.25□□□□□ -0.93
POLR1B-202ENST00000333990 GCHFRP30047 84 aa9.25□□□□□ -0.93
POLR1B-202ENST00000333990 CD69Q07108 199 aa9.25□□□□□ -0.93
POLR1B-202ENST00000333990 LYPD2Q6UXB3 125 aa9.25□□□□□ -0.93
POLR1B-202ENST00000333990 CYB561D1Q8N8Q1 229 aa9.25□□□□□ -0.93
POLR1B-202ENST00000333990 HIST1H2BAQ96A08 127 aa9.25□□□□□ -0.93
POLR1B-202ENST00000333990 GPR82Q96P67 336 aa9.25□□□□□ -0.93
POLR1B-202ENST00000333990 RPRMQ9NS64 109 aa9.25□□□□□ -0.93
POLR1B-202ENST00000333990 MBNL3Q9NUK0 354 aaKnown RBP9.25□□□□□ -0.93
POLR1B-202ENST00000333990 TRAV41A0A0B4J266 112 aa9.24□□□□□ -0.93
POLR1B-202ENST00000333990 RAMP3O60896 148 aa9.24□□□□□ -0.93
POLR1B-202ENST00000333990 IGFBP2P18065 325 aa9.24□□□□□ -0.93
POLR1B-202ENST00000333990 G0S2P27469 103 aa9.24□□□□□ -0.93
POLR1B-202ENST00000333990 TMEM167AQ8TBQ9 72 aa9.24□□□□□ -0.93
POLR1B-202ENST00000333990 SRD5A3Q9H8P0 318 aa9.24□□□□□ -0.93
POLR1B-202ENST00000333990 TMSB15BA0A087X1C1 80 aa9.24□□□□□ -0.93
POLR1B-202ENST00000333990 Q6ZR03 302 aa9.24□□□□□ -0.93
POLR1B-202ENST00000333990 OR11H4Q8NGC9 324 aa9.24□□□□□ -0.93
POLR1B-202ENST00000333990 TMEM250H0YL14 139 aa9.24□□□□□ -0.93
POLR1B-202ENST00000333990 IGHV3-11P01762 117 aa9.24□□□□□ -0.93
POLR1B-202ENST00000333990 BTCP35070 178 aa9.24□□□□□ -0.93
POLR1B-202ENST00000333990 RNF223E7ERA6 249 aa9.24□□□□□ -0.93
POLR1B-202ENST00000333990 GPX1P07203 203 aa9.24□□□□□ -0.93
POLR1B-202ENST00000333990 C5orf64Q2M2E5 130 aa9.24□□□□□ -0.93
POLR1B-202ENST00000333990 DMRTC2Q8IXT2 367 aaPredicted RBP9.24□□□□□ -0.93
POLR1B-202ENST00000333990 OR1P1Q8NH06 330 aa9.24□□□□□ -0.93
POLR1B-202ENST00000333990 C2CD4CQ8TF44 421 aa9.24□□□□□ -0.93
POLR1B-202ENST00000333990 FBLL1A6NHQ2 334 aaKnown RBP9.23□□□□□ -0.93
POLR1B-202ENST00000333990 SRD5A1P18405 259 aa9.23□□□□□ -0.93
POLR1B-202ENST00000333990 KLRD1Q13241 179 aa9.23□□□□□ -0.93
POLR1B-202ENST00000333990 PDZD11Q5EBL8 140 aa9.23□□□□□ -0.93
POLR1B-202ENST00000333990 IBA57Q5T440 356 aaKnown RBP9.23□□□□□ -0.93
POLR1B-202ENST00000333990 RNASEKQ6P5S7 137 aaKnown RBP9.23□□□□□ -0.93
POLR1B-202ENST00000333990 UQCRFS1P47985 274 aa9.23□□□□□ -0.93
POLR1B-202ENST00000333990 UBE2E1P51965 193 aa9.23□□□□□ -0.93
POLR1B-202ENST00000333990 BATFQ16520 125 aa9.23□□□□□ -0.93
POLR1B-202ENST00000333990 BEND2Q8NDZ0 799 aa9.23□□□□□ -0.93
POLR1B-202ENST00000333990 PLCE1Q9P212 2302 aa9.23□□□□□ -0.93
POLR1B-202ENST00000333990 J3QLI3 93 aa9.23□□□□□ -0.93
POLR1B-202ENST00000333990 CRISP2P16562 243 aa9.23□□□□□ -0.93
POLR1B-202ENST00000333990 MRPL54Q6P161 138 aaKnown RBP9.23□□□□□ -0.93
POLR1B-202ENST00000333990 RCC1LQ96I51 464 aaKnown RBP9.23□□□□□ -0.93
POLR1B-202ENST00000333990 SMUG1Q53HV7 270 aa9.22□□□□□ -0.93
POLR1B-202ENST00000333990 Q5BKY6 102 aa9.22□□□□□ -0.93
POLR1B-202ENST00000333990 BRD3OSQ6XYD6 125 aa9.22□□□□□ -0.93
POLR1B-202ENST00000333990 IGHV3OR16-13A0A075B7E8 117 aa9.22□□□□□ -0.93
POLR1B-202ENST00000333990 IGHV3-74A0A0B4J1X5 117 aa9.22□□□□□ -0.93
POLR1B-202ENST00000333990 ZNF253O75346 499 aa9.22□□□□□ -0.93
POLR1B-202ENST00000333990 CGAP01215 116 aa9.22□□□□□ -0.93
POLR1B-202ENST00000333990 MT-ND6P03923 174 aa9.22□□□□□ -0.93
POLR1B-202ENST00000333990 MGPP08493 103 aa9.22□□□□□ -0.93
POLR1B-202ENST00000333990 AMTP48728 403 aa9.22□□□□□ -0.93
POLR1B-202ENST00000333990 TEX36Q5VZQ5 186 aa9.22□□□□□ -0.93
POLR1B-202ENST00000333990 C19orf35Q6ZS72 473 aa9.22□□□□□ -0.93
POLR1B-202ENST00000333990 SGMS2Q8NHU3 365 aa9.22□□□□□ -0.93
POLR1B-202ENST00000333990 TMPRSS5Q9H3S3 457 aa9.22□□□□□ -0.93
POLR1B-202ENST00000333990 TUBA4BQ9H853 241 aa9.22□□□□□ -0.93
POLR1B-202ENST00000333990 S4R3C0 116 aa9.22□□□□□ -0.93
POLR1B-202ENST00000333990 TCRBV4S1A1TA0A5B7 111 aa9.22□□□□□ -0.93
POLR1B-202ENST00000333990 PSMB11A5LHX3 300 aa9.22□□□□□ -0.93
POLR1B-202ENST00000333990 IGHV3-23P01764 117 aa9.22□□□□□ -0.93
POLR1B-202ENST00000333990 MFAP2P55001 183 aa9.22□□□□□ -0.93
POLR1B-202ENST00000333990 HIST1H1AQ02539 215 aaPredicted RBP9.22□□□□□ -0.93
POLR1B-202ENST00000333990 DMRTA2Q96SC8 542 aa9.22□□□□□ -0.93
POLR1B-202ENST00000333990 SH3BGRL3Q9H299 93 aa9.22□□□□□ -0.93
POLR1B-202ENST00000333990 BEX4Q9NWD9 120 aaPredicted RBP9.22□□□□□ -0.93
POLR1B-202ENST00000333990 TEX50A0A1B0GTY4 177 aa9.21□□□□□ -0.93
POLR1B-202ENST00000333990 ZNF503-AS2A6NEH8 195 aa9.21□□□□□ -0.93
POLR1B-202ENST00000333990 MPTX1A8MV57 137 aa9.21□□□□□ -0.93
POLR1B-202ENST00000333990 H0YJW9 148 aa9.21□□□□□ -0.93
POLR1B-202ENST00000333990 PMCHP20382 165 aa9.21□□□□□ -0.93
POLR1B-202ENST00000333990 CRYBB3P26998 211 aa9.21□□□□□ -0.93
POLR1B-202ENST00000333990 CX3CL1P78423 397 aa9.21□□□□□ -0.93
POLR1B-202ENST00000333990 ICAM4Q14773 271 aa9.21□□□□□ -0.93
POLR1B-202ENST00000333990 HERPUD1Q15011 391 aa9.21□□□□□ -0.93
POLR1B-202ENST00000333990 RSPO1Q2MKA7 263 aaPredicted RBP9.21□□□□□ -0.93
POLR1B-202ENST00000333990 KLHDC1Q8N7A1 406 aa9.21□□□□□ -0.93
POLR1B-202ENST00000333990 SLC50A1Q9BRV3 221 aa9.21□□□□□ -0.93
POLR1B-202ENST00000333990 NOTCH3Q9UM47 2321 aa9.21□□□□□ -0.93
POLR1B-202ENST00000333990 CGB1A6NKQ9 187 aa9.21□□□□□ -0.93
POLR1B-202ENST00000333990 E9PQ18 207 aa9.21□□□□□ -0.93
POLR1B-202ENST00000333990 SAA4P35542 130 aa9.21□□□□□ -0.93
POLR1B-202ENST00000333990 RPL29P47914 159 aaKnown RBP9.21□□□□□ -0.93
POLR1B-202ENST00000333990 GOLT1AQ6ZVE7 132 aa9.21□□□□□ -0.93
POLR1B-202ENST00000333990 RNF125Q96EQ8 232 aa9.21□□□□□ -0.93
POLR1B-202ENST00000333990 SCO1O75880 301 aa9.21□□□□□ -0.94
POLR1B-202ENST00000333990 ERVK11-1P61568 191 aa9.21□□□□□ -0.94
POLR1B-202ENST00000333990 C2orf83Q53S99 150 aa9.21□□□□□ -0.94
POLR1B-202ENST00000333990 RNF144BQ7Z419 303 aa9.21□□□□□ -0.94
POLR1B-202ENST00000333990 KAAG1Q9UBP8 84 aa9.21□□□□□ -0.94
POLR1B-202ENST00000333990 AMY1AP04745 511 aa9.21□□□□□ -0.94
POLR1B-202ENST00000333990 KRTDAPP60985 99 aa9.21□□□□□ -0.94
POLR1B-202ENST00000333990 FAM159AQ6UWV7 190 aa9.21□□□□□ -0.94
POLR1B-202ENST00000333990 ZMAT5Q9UDW3 170 aaKnown RBP9.21□□□□□ -0.94
POLR1B-202ENST00000333990 PHLDA3Q9Y5J5 127 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 153.5 ms