RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 KIR2DL5BA0A0G2JPC4 375 aa10.04□□□□□ -0.8
VPS33B-201ENST00000333371 E7EUB6 86 aa10.04□□□□□ -0.8
VPS33B-201ENST00000333371 REG1BP48304 166 aa10.04□□□□□ -0.8
VPS33B-201ENST00000333371 C1orf174Q8IYL3 243 aa10.04□□□□□ -0.8
VPS33B-201ENST00000333371 KIR2DL5AQ8N109 375 aa10.04□□□□□ -0.8
VPS33B-201ENST00000333371 GAFA1Q96PS6 74 aa10.04□□□□□ -0.8
VPS33B-201ENST00000333371 TEX50A0A1B0GTY4 177 aa10.03□□□□□ -0.8
VPS33B-201ENST00000333371 CFHR2P36980 270 aa10.03□□□□□ -0.8
VPS33B-201ENST00000333371 TPTE2P1Q5T6R2 138 aa10.03□□□□□ -0.8
VPS33B-201ENST00000333371 OR2T6Q8NHC8 308 aa10.03□□□□□ -0.8
VPS33B-201ENST00000333371 BTF3L4Q96K17 158 aa10.03□□□□□ -0.8
VPS33B-201ENST00000333371 RBM14Q96PK6 669 aaKnown RBP10.03□□□□□ -0.8
VPS33B-201ENST00000333371 GNB4Q9HAV0 340 aa10.03□□□□□ -0.8
VPS33B-201ENST00000333371 SLC35D1Q9NTN3 355 aa10.03□□□□□ -0.8
VPS33B-201ENST00000333371 C9JCJ5 164 aa10.03□□□□□ -0.8
VPS33B-201ENST00000333371 MT-CO2P00403 227 aa10.03□□□□□ -0.8
VPS33B-201ENST00000333371 MGST1P10620 155 aaKnown RBP10.03□□□□□ -0.8
VPS33B-201ENST00000333371 TIMM23BQ5SRD1 257 aa10.03□□□□□ -0.8
VPS33B-201ENST00000333371 MRPL54Q6P161 138 aaKnown RBP10.03□□□□□ -0.8
VPS33B-201ENST00000333371 LHFPL4Q7Z7J7 247 aa10.03□□□□□ -0.8
VPS33B-201ENST00000333371 RCHY1Q96PM5 261 aa10.03□□□□□ -0.8
VPS33B-201ENST00000333371 NAT8BQ9UHF3 227 aa10.03□□□□□ -0.8
VPS33B-201ENST00000333371 APC2O95996 2303 aa10.03□□□□□ -0.8
VPS33B-201ENST00000333371 RELNP78509 3460 aa10.03□□□□□ -0.8
VPS33B-201ENST00000333371 A8MXE2 369 aa10.03□□□□□ -0.8
VPS33B-201ENST00000333371 UPK2O00526 184 aa10.03□□□□□ -0.8
VPS33B-201ENST00000333371 IGHV1-46P01743 117 aa10.03□□□□□ -0.8
VPS33B-201ENST00000333371 SAA1P0DJI8 122 aaPredicted RBP10.03□□□□□ -0.8
VPS33B-201ENST00000333371 GLRXP35754 106 aa10.03□□□□□ -0.8
VPS33B-201ENST00000333371 TPPP2P59282 170 aa10.03□□□□□ -0.8
VPS33B-201ENST00000333371 TNFAIP6P98066 277 aaPredicted RBP10.03□□□□□ -0.8
VPS33B-201ENST00000333371 FAM27E3Q08E93 113 aa10.03□□□□□ -0.8
VPS33B-201ENST00000333371 FOXC1Q12948 553 aa10.03□□□□□ -0.8
VPS33B-201ENST00000333371 LBHQ53QV2 105 aaPredicted RBP10.03□□□□□ -0.8
VPS33B-201ENST00000333371 ASCL5Q7RTU5 278 aa10.03□□□□□ -0.8
VPS33B-201ENST00000333371 FAM169BQ8N8A8 192 aa10.03□□□□□ -0.8
VPS33B-201ENST00000333371 SAMD10Q9BYL1 202 aa10.03□□□□□ -0.8
VPS33B-201ENST00000333371 RNF7Q9UBF6 113 aa10.03□□□□□ -0.8
VPS33B-201ENST00000333371 A6NNC1 897 aa10.02□□□□□ -0.81
VPS33B-201ENST00000333371 AREGP15514 252 aa10.02□□□□□ -0.81
VPS33B-201ENST00000333371 CCL8P80075 99 aa10.02□□□□□ -0.81
VPS33B-201ENST00000333371 PRCDQ00LT1 54 aa10.02□□□□□ -0.81
VPS33B-201ENST00000333371 STUMQ69YW2 141 aa10.02□□□□□ -0.81
VPS33B-201ENST00000333371 FAM168AQ92567 244 aa10.02□□□□□ -0.81
VPS33B-201ENST00000333371 NEU1Q99519 415 aa10.02□□□□□ -0.81
VPS33B-201ENST00000333371 SSBP3Q9BWW4 388 aaPredicted RBP10.02□□□□□ -0.81
VPS33B-201ENST00000333371 SERTAD4Q9NUC0 356 aa10.02□□□□□ -0.81
VPS33B-201ENST00000333371 LRBAP50851 2863 aa10.02□□□□□ -0.81
VPS33B-201ENST00000333371 CCL3L1P16619 93 aa10.02□□□□□ -0.81
VPS33B-201ENST00000333371 CHRNB4P30926 498 aa10.02□□□□□ -0.81
VPS33B-201ENST00000333371 CASP6P55212 293 aa10.02□□□□□ -0.81
VPS33B-201ENST00000333371 DIAPH2-AS1Q14236 149 aa10.02□□□□□ -0.81
VPS33B-201ENST00000333371 C10orf55Q5SWW7 151 aa10.02□□□□□ -0.81
VPS33B-201ENST00000333371 CYB5R2Q6BCY4 276 aa10.02□□□□□ -0.81
VPS33B-201ENST00000333371 FAM57AQ8TBR7 257 aa10.02□□□□□ -0.81
VPS33B-201ENST00000333371 SFXN3Q9BWM7 321 aa10.02□□□□□ -0.81
VPS33B-201ENST00000333371 IL19Q9UHD0 177 aa10.02□□□□□ -0.81
VPS33B-201ENST00000333371 FBXL7Q9UJT9 491 aa10.02□□□□□ -0.81
VPS33B-201ENST00000333371 IGLV2-8P01709 118 aa10.01□□□□□ -0.81
VPS33B-201ENST00000333371 RNASE2P10153 161 aaKnown RBP10.01□□□□□ -0.81
VPS33B-201ENST00000333371 COMPP49747 757 aaPredicted RBP10.01□□□□□ -0.81
VPS33B-201ENST00000333371 MRPL20Q9BYC9 149 aaKnown RBP10.01□□□□□ -0.81
VPS33B-201ENST00000333371 M0R143 59 aa10.01□□□□□ -0.81
VPS33B-201ENST00000333371 PYYP10082 97 aa10.01□□□□□ -0.81
VPS33B-201ENST00000333371 KRTDAPP60985 99 aa10.01□□□□□ -0.81
VPS33B-201ENST00000333371 OR5AU1Q8NGC0 362 aa10.01□□□□□ -0.81
VPS33B-201ENST00000333371 ABHD17AQ96GS6 310 aa10.01□□□□□ -0.81
VPS33B-201ENST00000333371 TECRQ9NZ01 308 aaKnown RBP10.01□□□□□ -0.81
VPS33B-201ENST00000333371 PRNDQ9UKY0 176 aa10.01□□□□□ -0.81
VPS33B-201ENST00000333371 DCHS2Q6V1P9 2916 aa10.01□□□□□ -0.81
VPS33B-201ENST00000333371 IGLV3-9A0A075B6K5 115 aa10□□□□□ -0.81
VPS33B-201ENST00000333371 FCN3O75636 299 aa10□□□□□ -0.81
VPS33B-201ENST00000333371 RAB4AP20338 218 aa10□□□□□ -0.81
VPS33B-201ENST00000333371 TDGF1P3P51864 188 aa10□□□□□ -0.81
VPS33B-201ENST00000333371 FAM222BQ8WU58 562 aa10□□□□□ -0.81
VPS33B-201ENST00000333371 TRAV34A0A0B4J273 112 aa10□□□□□ -0.81
VPS33B-201ENST00000333371 PLAUP00749 431 aa10□□□□□ -0.81
VPS33B-201ENST00000333371 IRF2P14316 349 aa10□□□□□ -0.81
VPS33B-201ENST00000333371 PMCHP20382 165 aa10□□□□□ -0.81
VPS33B-201ENST00000333371 TMEM136Q6ZRR5 245 aa10□□□□□ -0.81
VPS33B-201ENST00000333371 SLC25A48Q6ZT89 311 aaKnown RBP10□□□□□ -0.81
VPS33B-201ENST00000333371 ZNF436-AS1Q8NC38 126 aaPredicted RBP10□□□□□ -0.81
VPS33B-201ENST00000333371 SGK494Q96LW2 274 aa10□□□□□ -0.81
VPS33B-201ENST00000333371 TMEM167BQ9NRX6 74 aa10□□□□□ -0.81
VPS33B-201ENST00000333371 RPUSD1Q9UJJ7 312 aaKnown RBP10□□□□□ -0.81
VPS33B-201ENST00000333371 PRRG2O14669 202 aa9.99□□□□□ -0.81
VPS33B-201ENST00000333371 ITGB1BP1O14713 200 aa9.99□□□□□ -0.81
VPS33B-201ENST00000333371 BATFQ16520 125 aa9.99□□□□□ -0.81
VPS33B-201ENST00000333371 POU2AF1Q16633 256 aa9.99□□□□□ -0.81
VPS33B-201ENST00000333371 TIGITQ495A1 244 aa9.99□□□□□ -0.81
VPS33B-201ENST00000333371 ZNF788Q6ZQV5 615 aa9.99□□□□□ -0.81
VPS33B-201ENST00000333371 FAM19A2Q8N3H0 131 aa9.99□□□□□ -0.81
VPS33B-201ENST00000333371 SLC25A33Q9BSK2 321 aa9.99□□□□□ -0.81
VPS33B-201ENST00000333371 SLC25A10Q9UBX3 287 aaPredicted RBP9.99□□□□□ -0.81
VPS33B-201ENST00000333371 SRIP30626 198 aa9.99□□□□□ -0.81
VPS33B-201ENST00000333371 PAFAH1B2P68402 229 aa9.99□□□□□ -0.81
VPS33B-201ENST00000333371 CX3CL1P78423 397 aa9.99□□□□□ -0.81
VPS33B-201ENST00000333371 RTL8BQ17RB0 113 aa9.99□□□□□ -0.81
VPS33B-201ENST00000333371 IBA57Q5T440 356 aaKnown RBP9.99□□□□□ -0.81
VPS33B-201ENST00000333371 RUSC1-AS1Q66K80 236 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms