RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 TAS2R45P59539 299 aa19.31■□□□□ 0.68
TSKU-201ENST00000333090 CR1LQ2VPA4 569 aa19.31■□□□□ 0.68
TSKU-201ENST00000333090 MAJINQ3KP22 176 aa19.31■□□□□ 0.68
TSKU-201ENST00000333090 LCN12Q6JVE5 192 aa19.31■□□□□ 0.68
TSKU-201ENST00000333090 ALKBH2Q6NS38 261 aa19.31■□□□□ 0.68
TSKU-201ENST00000333090 SVILO95425 2214 aa19.31■□□□□ 0.68
TSKU-201ENST00000333090 PCNX2A6NKB5 2137 aa19.31■□□□□ 0.68
TSKU-201ENST00000333090 DCHS1Q96JQ0 3298 aa19.31■□□□□ 0.68
TSKU-201ENST00000333090 IGF2BP2-AS1Q96M15 143 aa19.31■□□□□ 0.68
TSKU-201ENST00000333090 LINC00479Q96M42 142 aa19.31■□□□□ 0.68
TSKU-201ENST00000333090 CNOT1A5YKK6 2376 aaKnown RBP19.3■□□□□ 0.68
TSKU-201ENST00000333090 IGHV2OR16-5A0A0B4J2B6 119 aa19.3■□□□□ 0.68
TSKU-201ENST00000333090 NDUFB8O95169 186 aa19.3■□□□□ 0.68
TSKU-201ENST00000333090 SPRNQ5BIV9 151 aa19.3■□□□□ 0.68
TSKU-201ENST00000333090 OR9G1Q8NH87 305 aa19.3■□□□□ 0.68
TSKU-201ENST00000333090 ICE1Q9Y2F5 2266 aa19.3■□□□□ 0.68
TSKU-201ENST00000333090 FNDC10F2Z333 226 aa19.3■□□□□ 0.68
TSKU-201ENST00000333090 MMP23AO75900 390 aa19.3■□□□□ 0.68
TSKU-201ENST00000333090 IZUMO1RA6ND01 250 aa19.29■□□□□ 0.68
TSKU-201ENST00000333090 C18orf32Q8TCD1 76 aa19.29■□□□□ 0.68
TSKU-201ENST00000333090 GNG10P50151 68 aa19.29■□□□□ 0.68
TSKU-201ENST00000333090 MZT1Q08AG7 82 aa19.29■□□□□ 0.68
TSKU-201ENST00000333090 C17orf58Q2M2W7 97 aa19.29■□□□□ 0.68
TSKU-201ENST00000333090 FAM201AQ5SY85 155 aa19.29■□□□□ 0.68
TSKU-201ENST00000333090 HES3Q5TGS1 186 aa19.29■□□□□ 0.68
TSKU-201ENST00000333090 MBNL2Q5VZF2 373 aaKnown RBP19.29■□□□□ 0.68
TSKU-201ENST00000333090 C19orf35Q6ZS72 473 aa19.29■□□□□ 0.68
TSKU-201ENST00000333090 KLHDC1Q8N7A1 406 aa19.29■□□□□ 0.68
TSKU-201ENST00000333090 TMEM178AQ8NBL3 297 aa19.29■□□□□ 0.68
TSKU-201ENST00000333090 CLEC7AQ9BXN2 247 aa19.29■□□□□ 0.68
TSKU-201ENST00000333090 A0A1W2PRE2 83 aa19.28■□□□□ 0.68
TSKU-201ENST00000333090 KIR2DL2P43627 348 aaPredicted RBP19.28■□□□□ 0.68
TSKU-201ENST00000333090 MOGAT3Q86VF5 341 aa19.28■□□□□ 0.68
TSKU-201ENST00000333090 PRNDQ9UKY0 176 aa19.28■□□□□ 0.68
TSKU-201ENST00000333090 C8orf88P0DMB2 117 aa19.28■□□□□ 0.68
TSKU-201ENST00000333090 TRAV5A0A0B4J249 113 aa19.27■□□□□ 0.68
TSKU-201ENST00000333090 IGHV1-18A0A0C4DH31 117 aa19.27■□□□□ 0.68
TSKU-201ENST00000333090 REG1AP05451 166 aa19.27■□□□□ 0.68
TSKU-201ENST00000333090 PRCDQ00LT1 54 aa19.27■□□□□ 0.68
TSKU-201ENST00000333090 STUMQ69YW2 141 aa19.27■□□□□ 0.68
TSKU-201ENST00000333090 SLC25A33Q9BSK2 321 aa19.27■□□□□ 0.68
TSKU-201ENST00000333090 ZNF355PQ9NSJ1 428 aa19.27■□□□□ 0.68
TSKU-201ENST00000333090 HINT1P49773 126 aaPredicted RBP19.27■□□□□ 0.67
TSKU-201ENST00000333090 UBE2L3P68036 154 aaKnown RBP19.27■□□□□ 0.67
TSKU-201ENST00000333090 MORN5Q5VZ52 161 aa19.27■□□□□ 0.67
TSKU-201ENST00000333090 OR2V2Q96R30 315 aa19.27■□□□□ 0.67
TSKU-201ENST00000333090 C20orf202A1L168 122 aa19.26■□□□□ 0.67
TSKU-201ENST00000333090 IGKV1-16P04430 117 aa19.26■□□□□ 0.67
TSKU-201ENST00000333090 MFAP2P55001 183 aa19.26■□□□□ 0.67
TSKU-201ENST00000333090 MSMPQ1L6U9 139 aa19.26■□□□□ 0.67
TSKU-201ENST00000333090 PCP4P48539 62 aa19.26■□□□□ 0.67
TSKU-201ENST00000333090 SELENOVP59797 346 aa19.26■□□□□ 0.67
TSKU-201ENST00000333090 TNXAQ16473 311 aa19.26■□□□□ 0.67
TSKU-201ENST00000333090 INTS1Q8N201 2190 aaKnown RBP19.25■□□□□ 0.67
TSKU-201ENST00000333090 HSBP1O75506 76 aa19.25■□□□□ 0.67
TSKU-201ENST00000333090 CGB3P0DN86 165 aa19.25■□□□□ 0.67
TSKU-201ENST00000333090 CGB7P0DN87 165 aa19.25■□□□□ 0.67
TSKU-201ENST00000333090 TSPOP30536 169 aa19.25■□□□□ 0.67
TSKU-201ENST00000333090 RTL8BQ17RB0 113 aa19.25■□□□□ 0.67
TSKU-201ENST00000333090 Q6ZVH6 145 aa19.25■□□□□ 0.67
TSKU-201ENST00000333090 SPACA3Q8IXA5 215 aa19.25■□□□□ 0.67
TSKU-201ENST00000333090 C9orf106Q8NAJ2 232 aa19.25■□□□□ 0.67
TSKU-201ENST00000333090 DUX4L9Q6RFH8 374 aaPredicted RBP19.25■□□□□ 0.67
TSKU-201ENST00000333090 ZNF436-AS1Q8NC38 126 aaPredicted RBP19.25■□□□□ 0.67
TSKU-201ENST00000333090 KBTBD11-OT1A0A1B0GTJ5 212 aa19.24■□□□□ 0.67
TSKU-201ENST00000333090 SRRM4A7MD48 611 aaKnown RBP19.24■□□□□ 0.67
TSKU-201ENST00000333090 GUSBP1Q15486 140 aa19.24■□□□□ 0.67
TSKU-201ENST00000333090 C19orf24Q9BVV8 132 aa19.24■□□□□ 0.67
TSKU-201ENST00000333090 COMMD5Q9GZQ3 224 aa19.24■□□□□ 0.67
TSKU-201ENST00000333090 MRPL27Q9P0M9 148 aaKnown RBP19.24■□□□□ 0.67
TSKU-201ENST00000333090 DSCAMO60469 2012 aa19.24■□□□□ 0.67
TSKU-201ENST00000333090 M0R296 226 aa19.24■□□□□ 0.67
TSKU-201ENST00000333090 Q56UQ5 140 aa19.24■□□□□ 0.67
TSKU-201ENST00000333090 OR10W1Q8NGF6 305 aa19.24■□□□□ 0.67
TSKU-201ENST00000333090 ADTRPQ96IZ2 230 aa19.24■□□□□ 0.67
TSKU-201ENST00000333090 MAP1BP46821 2468 aaKnown RBP19.24■□□□□ 0.67
TSKU-201ENST00000333090 UPK2O00526 184 aa19.24■□□□□ 0.67
TSKU-201ENST00000333090 ITGB1BP1O14713 200 aa19.24■□□□□ 0.67
TSKU-201ENST00000333090 IGLV1-44P01699 117 aa19.24■□□□□ 0.67
TSKU-201ENST00000333090 PTTG1IPP53801 180 aa19.24■□□□□ 0.67
TSKU-201ENST00000333090 C1orf162Q8NEQ5 155 aaPredicted RBP19.24■□□□□ 0.67
TSKU-201ENST00000333090 ZNF257Q9Y2Q1 563 aa19.24■□□□□ 0.67
TSKU-201ENST00000333090 TEX50A0A1B0GTY4 177 aa19.23■□□□□ 0.67
TSKU-201ENST00000333090 POU2AF1Q16633 256 aa19.23■□□□□ 0.67
TSKU-201ENST00000333090 PRR27Q6MZM9 219 aa19.23■□□□□ 0.67
TSKU-201ENST00000333090 ZNRD1Q9P1U0 126 aa19.23■□□□□ 0.67
TSKU-201ENST00000333090 M0R2Z0 102 aa19.23■□□□□ 0.67
TSKU-201ENST00000333090 SLC25A2Q9BXI2 301 aa19.23■□□□□ 0.67
TSKU-201ENST00000333090 AMMECR1Q9Y4X0 333 aaPredicted RBP19.23■□□□□ 0.67
TSKU-201ENST00000333090 YLPM1P49750 1951 aaKnown RBP19.22■□□□□ 0.67
TSKU-201ENST00000333090 CCL25O15444 150 aa19.22■□□□□ 0.67
TSKU-201ENST00000333090 SPRY3O43610 288 aa19.22■□□□□ 0.67
TSKU-201ENST00000333090 PYYP10082 97 aa19.22■□□□□ 0.67
TSKU-201ENST00000333090 GPR6P46095 362 aaPredicted RBP19.22■□□□□ 0.67
TSKU-201ENST00000333090 RPL8P62917 257 aaKnown RBP19.22■□□□□ 0.67
TSKU-201ENST00000333090 PMCHL1Q16048 86 aa19.22■□□□□ 0.67
TSKU-201ENST00000333090 GDF5OSQ5U4N7 250 aa19.22■□□□□ 0.67
TSKU-201ENST00000333090 UNQ5815/PRO19632Q6UWF5 114 aa19.22■□□□□ 0.67
TSKU-201ENST00000333090 NUP35Q8NFH5 326 aa19.22■□□□□ 0.67
TSKU-201ENST00000333090 FAM167A-AS1Q96KT0 104 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms