RNA–Protein interactions for RNA: ENST00000331479.3

SMDT1-201, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMDT1, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-201ENST00000331479 C5orf51A6NDU8 294 aa20.02■□□□□ 0.8
SMDT1-201ENST00000331479 IAPPP10997 89 aa20.02■□□□□ 0.8
SMDT1-201ENST00000331479 PVRIGQ6DKI7 326 aa20.02■□□□□ 0.8
SMDT1-201ENST00000331479 TMEM170AQ8WVE7 144 aa20.02■□□□□ 0.8
SMDT1-201ENST00000331479 MISP3Q96FF7 219 aa20.02■□□□□ 0.8
SMDT1-201ENST00000331479 K7EIM0 57 aa20.01■□□□□ 0.79
SMDT1-201ENST00000331479 PF4P02776 101 aa20.01■□□□□ 0.79
SMDT1-201ENST00000331479 MYCNOSP40205 109 aa20.01■□□□□ 0.79
SMDT1-201ENST00000331479 HTR2BP41595 481 aa20.01■□□□□ 0.79
SMDT1-201ENST00000331479 NKX2-1P43699 371 aaPredicted RBP20.01■□□□□ 0.79
SMDT1-201ENST00000331479 POLR2GP62487 172 aaKnown RBP eCLIP20.01■□□□□ 0.79
SMDT1-201ENST00000331479 FHL3Q13643 280 aa20.01■□□□□ 0.79
SMDT1-201ENST00000331479 SLC24A4Q8NFF2 622 aa20.01■□□□□ 0.79
SMDT1-201ENST00000331479 CCDC140Q96MF4 163 aa20.01■□□□□ 0.79
SMDT1-201ENST00000331479 SYNGR2O43760 224 aa20■□□□□ 0.79
SMDT1-201ENST00000331479 SUB1P53999 127 aaKnown RBP eCLIP20■□□□□ 0.79
SMDT1-201ENST00000331479 I3L2K1 104 aa20■□□□□ 0.79
SMDT1-201ENST00000331479 GOSR2O14653 212 aa20■□□□□ 0.79
SMDT1-201ENST00000331479 SSNA1O43805 119 aa20■□□□□ 0.79
SMDT1-201ENST00000331479 MED6O75586 246 aa20■□□□□ 0.79
SMDT1-201ENST00000331479 SIX6O95475 246 aa20■□□□□ 0.79
SMDT1-201ENST00000331479 SCGB1D2O95969 90 aa20■□□□□ 0.79
SMDT1-201ENST00000331479 HSPB1P04792 205 aaKnown RBP20■□□□□ 0.79
SMDT1-201ENST00000331479 ZNF616Q08AN1 781 aa20■□□□□ 0.79
SMDT1-201ENST00000331479 GSG1LQ6UXU4 331 aa20■□□□□ 0.79
SMDT1-201ENST00000331479 SCARB1Q8WTV0 552 aa20■□□□□ 0.79
SMDT1-201ENST00000331479 EEF1AKMT3Q96AZ1 226 aa20■□□□□ 0.79
SMDT1-201ENST00000331479 PINX1Q96BK5 328 aaKnown RBP20■□□□□ 0.79
SMDT1-201ENST00000331479 CXorf58Q96LI9 332 aa20■□□□□ 0.79
SMDT1-201ENST00000331479 C2orf50Q96LR7 162 aa20■□□□□ 0.79
SMDT1-201ENST00000331479 PEF1Q9UBV8 284 aaKnown RBP20■□□□□ 0.79
SMDT1-201ENST00000331479 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP19.99■□□□□ 0.79
SMDT1-201ENST00000331479 WRBO00258 174 aa19.99■□□□□ 0.79
SMDT1-201ENST00000331479 C2orf83Q53S99 150 aa19.99■□□□□ 0.79
SMDT1-201ENST00000331479 VN1R17PQ8TDU5 208 aa19.99■□□□□ 0.79
SMDT1-201ENST00000331479 LINC01619G3V211 115 aa19.98■□□□□ 0.79
SMDT1-201ENST00000331479 MT-CO2P00403 227 aa19.98■□□□□ 0.79
SMDT1-201ENST00000331479 IGHV3-48P01763 117 aa19.98■□□□□ 0.79
SMDT1-201ENST00000331479 NPY1RP25929 384 aa19.98■□□□□ 0.79
SMDT1-201ENST00000331479 TREML4Q6UXN2 200 aa19.98■□□□□ 0.79
SMDT1-201ENST00000331479 CLEC19AQ6UXS0 136 aa19.98■□□□□ 0.79
SMDT1-201ENST00000331479 LINC00482Q8N8I6 264 aa19.98■□□□□ 0.79
SMDT1-201ENST00000331479 ZNF502Q8TBZ5 544 aa19.98■□□□□ 0.79
SMDT1-201ENST00000331479 DPF1Q92782 380 aa19.98■□□□□ 0.79
SMDT1-201ENST00000331479 RANGRFQ9HD47 186 aaPredicted RBP19.98■□□□□ 0.79
SMDT1-201ENST00000331479 U3KQ87 197 aa19.98■□□□□ 0.79
SMDT1-201ENST00000331479 IFNA10P01566 189 aa19.97■□□□□ 0.79
SMDT1-201ENST00000331479 MBPP02686 304 aaPredicted RBP19.97■□□□□ 0.79
SMDT1-201ENST00000331479 TRBV7-1A0A0A6YYK4 115 aa19.96■□□□□ 0.79
SMDT1-201ENST00000331479 PPP5D1E7EU14 171 aa19.96■□□□□ 0.79
SMDT1-201ENST00000331479 SLURP1P55000 103 aa19.96■□□□□ 0.79
SMDT1-201ENST00000331479 BMPR1BO00238 502 aa19.95■□□□□ 0.78
SMDT1-201ENST00000331479 SSSCA1O60232 199 aa19.95■□□□□ 0.78
SMDT1-201ENST00000331479 IL15RAQ13261 267 aa19.95■□□□□ 0.78
SMDT1-201ENST00000331479 MLANAQ16655 118 aa19.95■□□□□ 0.78
SMDT1-201ENST00000331479 CIB3Q96Q77 187 aaPredicted RBP19.95■□□□□ 0.78
SMDT1-201ENST00000331479 FNDC4Q9H6D8 234 aaPredicted RBP19.95■□□□□ 0.78
SMDT1-201ENST00000331479 C21orf62Q9NYP8 219 aa19.95■□□□□ 0.78
SMDT1-201ENST00000331479 RCL1Q9Y2P8 373 aaKnown RBP19.95■□□□□ 0.78
SMDT1-201ENST00000331479 F8W735 103 aaPredicted RBP19.95■□□□□ 0.78
SMDT1-201ENST00000331479 TMEM50AO95807 157 aa19.95■□□□□ 0.78
SMDT1-201ENST00000331479 CLEC3BP05452 202 aa19.95■□□□□ 0.78
SMDT1-201ENST00000331479 H2BFSP57053 126 aa19.95■□□□□ 0.78
SMDT1-201ENST00000331479 ZC4H2Q9NQZ6 224 aa19.95■□□□□ 0.78
SMDT1-201ENST00000331479 C15orf62A8K5M9 175 aa19.94■□□□□ 0.78
SMDT1-201ENST00000331479 CORTO00230 105 aa19.94■□□□□ 0.78
SMDT1-201ENST00000331479 OR8U8P0C7N1 319 aa19.94■□□□□ 0.78
SMDT1-201ENST00000331479 HOXD3P31249 432 aaPredicted RBP19.94■□□□□ 0.78
SMDT1-201ENST00000331479 GPR183P32249 361 aa19.94■□□□□ 0.78
SMDT1-201ENST00000331479 WDR89Q96FK6 387 aaPredicted RBP19.94■□□□□ 0.78
SMDT1-201ENST00000331479 MGAT4CQ9UBM8 478 aa19.94■□□□□ 0.78
SMDT1-201ENST00000331479 H3BP45 60 aa19.93■□□□□ 0.78
SMDT1-201ENST00000331479 OPRK1P41145 380 aa19.93■□□□□ 0.78
SMDT1-201ENST00000331479 PAX9P55771 341 aa19.93■□□□□ 0.78
SMDT1-201ENST00000331479 WFDC9Q8NEX5 89 aa19.93■□□□□ 0.78
SMDT1-201ENST00000331479 OR4C12Q96R67 309 aa19.93■□□□□ 0.78
SMDT1-201ENST00000331479 K7EPK0 472 aa19.92■□□□□ 0.78
SMDT1-201ENST00000331479 UBAC2Q8NBM4 344 aa19.92■□□□□ 0.78
SMDT1-201ENST00000331479 RNASEH2CQ8TDP1 164 aaKnown RBP19.92■□□□□ 0.78
SMDT1-201ENST00000331479 DLX4Q92988 240 aaPredicted RBP19.92■□□□□ 0.78
SMDT1-201ENST00000331479 MRPL36Q9P0J6 103 aaKnown RBP19.92■□□□□ 0.78
SMDT1-201ENST00000331479 LSM5Q9Y4Y9 91 aaKnown RBP19.92■□□□□ 0.78
SMDT1-201ENST00000331479 OR2T8A6NH00 312 aa19.91■□□□□ 0.78
SMDT1-201ENST00000331479 ARL3P36405 182 aa19.91■□□□□ 0.78
SMDT1-201ENST00000331479 FAM209BQ5JX69 171 aa19.91■□□□□ 0.78
SMDT1-201ENST00000331479 SPANXN5Q5MJ07 72 aa19.91■□□□□ 0.78
SMDT1-201ENST00000331479 NOXA1Q86UR1 476 aa19.91■□□□□ 0.78
SMDT1-201ENST00000331479 DCUN1D4Q92564 292 aa19.91■□□□□ 0.78
SMDT1-201ENST00000331479 CD33P20138 364 aa19.91■□□□□ 0.78
SMDT1-201ENST00000331479 ZP3P21754 424 aa19.91■□□□□ 0.78
SMDT1-201ENST00000331479 ATP5IP56385 69 aaPredicted RBP19.91■□□□□ 0.78
SMDT1-201ENST00000331479 RAB32Q13637 225 aa19.91■□□□□ 0.78
SMDT1-201ENST00000331479 Q56UQ5 140 aa19.91■□□□□ 0.78
SMDT1-201ENST00000331479 SMIM8Q96KF7 97 aa19.91■□□□□ 0.78
SMDT1-201ENST00000331479 PSENENQ9NZ42 101 aa19.91■□□□□ 0.78
SMDT1-201ENST00000331479 PAIP2BQ9ULR5 123 aaKnown RBP19.91■□□□□ 0.78
SMDT1-201ENST00000331479 IFNA4P05014 189 aa19.9■□□□□ 0.78
SMDT1-201ENST00000331479 CXCL3P19876 107 aa19.9■□□□□ 0.78
SMDT1-201ENST00000331479 MFAP4P55083 255 aa19.9■□□□□ 0.78
SMDT1-201ENST00000331479 RAB40CQ96S21 281 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms