RNA–Protein interactions for RNA: ENST00000329151.5

TMEM54-201, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best) BASIC

Gene TMEM54, Length 871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-201ENST00000329151 TRAV14DV4A0A0A6YYC5 116 aa17.25■□□□□ 0.35
TMEM54-201ENST00000329151 MPTX1A8MV57 137 aa17.25■□□□□ 0.35
TMEM54-201ENST00000329151 CTSGP08311 255 aa17.25■□□□□ 0.35
TMEM54-201ENST00000329151 TBC1D26Q86UD7 250 aa17.25■□□□□ 0.35
TMEM54-201ENST00000329151 CSTL1Q9H114 145 aa17.25■□□□□ 0.35
TMEM54-201ENST00000329151 FAM212BQ9NTI7 297 aaPredicted RBP17.25■□□□□ 0.35
TMEM54-201ENST00000329151 CHEK1O14757 476 aa17.24■□□□□ 0.35
TMEM54-201ENST00000329151 CD5P06127 495 aa17.24■□□□□ 0.35
TMEM54-201ENST00000329151 EWSR1Q01844 656 aaKnown RBP eCLIP17.24■□□□□ 0.35
TMEM54-201ENST00000329151 FAM25AB3EWG3 89 aa17.23■□□□□ 0.35
TMEM54-201ENST00000329151 FAM25CB3EWG5 89 aa17.23■□□□□ 0.35
TMEM54-201ENST00000329151 FAM25GB3EWG6 89 aa17.23■□□□□ 0.35
TMEM54-201ENST00000329151 F8W735 103 aaPredicted RBP17.23■□□□□ 0.35
TMEM54-201ENST00000329151 MT-CO2P00403 227 aa17.23■□□□□ 0.35
TMEM54-201ENST00000329151 GBGT1Q8N5D6 347 aa17.23■□□□□ 0.35
TMEM54-201ENST00000329151 GATAD1Q8WUU5 269 aa17.23■□□□□ 0.35
TMEM54-201ENST00000329151 DNASE2O00115 360 aaPredicted RBP17.22■□□□□ 0.35
TMEM54-201ENST00000329151 FCGR2BP31994 310 aaPredicted RBP17.22■□□□□ 0.35
TMEM54-201ENST00000329151 SNCAP37840 140 aa17.22■□□□□ 0.35
TMEM54-201ENST00000329151 NPBWR1P48145 328 aa17.22■□□□□ 0.35
TMEM54-201ENST00000329151 RPL11P62913 178 aaKnown RBP17.22■□□□□ 0.35
TMEM54-201ENST00000329151 PRCDQ00LT1 54 aa17.22■□□□□ 0.35
TMEM54-201ENST00000329151 SNX29P2Q8IUI4 249 aa17.22■□□□□ 0.35
TMEM54-201ENST00000329151 DYNC2LI1Q8TCX1 351 aa17.22■□□□□ 0.35
TMEM54-201ENST00000329151 PHLDA1Q8WV24 401 aaPredicted RBP17.22■□□□□ 0.35
TMEM54-201ENST00000329151 RARRES2Q99969 163 aa17.22■□□□□ 0.35
TMEM54-201ENST00000329151 PDCD10Q9BUL8 212 aa17.22■□□□□ 0.35
TMEM54-201ENST00000329151 NXF2Q9GZY0 626 aaKnown RBP17.22■□□□□ 0.35
TMEM54-201ENST00000329151 SCPEP1Q9HB40 452 aa17.22■□□□□ 0.35
TMEM54-201ENST00000329151 IGHV3OR16-13A0A075B7E8 117 aa17.21■□□□□ 0.35
TMEM54-201ENST00000329151 IGHV3-74A0A0B4J1X5 117 aa17.21■□□□□ 0.35
TMEM54-201ENST00000329151 DBX1A6NMT0 343 aa17.21■□□□□ 0.35
TMEM54-201ENST00000329151 H3BMQ9 156 aa17.21■□□□□ 0.35
TMEM54-201ENST00000329151 IFNA4P05014 189 aa17.21■□□□□ 0.35
TMEM54-201ENST00000329151 RCVRNP35243 200 aa17.21■□□□□ 0.35
TMEM54-201ENST00000329151 HSPE1P61604 102 aaKnown RBP17.21■□□□□ 0.35
TMEM54-201ENST00000329151 DUSP18Q8NEJ0 188 aa17.21■□□□□ 0.35
TMEM54-201ENST00000329151 MRGPRFQ96AM1 343 aa17.21■□□□□ 0.35
TMEM54-201ENST00000329151 SEC22AQ96IW7 307 aa17.21■□□□□ 0.35
TMEM54-201ENST00000329151 OR10C1Q96KK4 312 aa17.21■□□□□ 0.35
TMEM54-201ENST00000329151 MFFQ9GZY8 342 aa17.21■□□□□ 0.35
TMEM54-201ENST00000329151 CCDC59Q9P031 241 aaKnown RBP17.21■□□□□ 0.35
TMEM54-201ENST00000329151 I3L2K1 104 aa17.2■□□□□ 0.34
TMEM54-201ENST00000329151 ST8SIA3O43173 380 aa17.2■□□□□ 0.34
TMEM54-201ENST00000329151 SCGB2A1O75556 95 aa17.2■□□□□ 0.34
TMEM54-201ENST00000329151 ATG12O94817 140 aa17.2■□□□□ 0.34
TMEM54-201ENST00000329151 IGHV3-48P01763 117 aa17.2■□□□□ 0.34
TMEM54-201ENST00000329151 PGAM2P15259 253 aa17.2■□□□□ 0.34
TMEM54-201ENST00000329151 TCF24Q7RTU0 167 aa17.2■□□□□ 0.34
TMEM54-201ENST00000329151 LYSMD2Q8IV50 215 aa17.2■□□□□ 0.34
TMEM54-201ENST00000329151 SLC35G3Q8N808 338 aa17.2■□□□□ 0.34
TMEM54-201ENST00000329151 ZNF114Q8NC26 417 aa17.2■□□□□ 0.34
TMEM54-201ENST00000329151 GPX8Q8TED1 209 aa17.2■□□□□ 0.34
TMEM54-201ENST00000329151 TMEM231Q9H6L2 316 aa17.2■□□□□ 0.34
TMEM54-201ENST00000329151 RGS5O15539 181 aa17.19■□□□□ 0.34
TMEM54-201ENST00000329151 AKR1C2P52895 323 aa17.19■□□□□ 0.34
TMEM54-201ENST00000329151 EXTL2Q9UBQ6 330 aa17.19■□□□□ 0.34
TMEM54-201ENST00000329151 FBXL17Q9UF56 701 aa17.19■□□□□ 0.34
TMEM54-201ENST00000329151 SUB1P53999 127 aaKnown RBP eCLIP17.18■□□□□ 0.34
TMEM54-201ENST00000329151 UCP3P55916 312 aa17.18■□□□□ 0.34
TMEM54-201ENST00000329151 RBMS2Q15434 407 aaKnown RBP17.18■□□□□ 0.34
TMEM54-201ENST00000329151 ZNF124Q15973 351 aa17.18■□□□□ 0.34
TMEM54-201ENST00000329151 OR11H2Q8NH07 326 aa17.18■□□□□ 0.34
TMEM54-201ENST00000329151 C11orf45Q8TAV5 145 aa17.18■□□□□ 0.34
TMEM54-201ENST00000329151 MIXL1Q9H2W2 232 aa17.18■□□□□ 0.34
TMEM54-201ENST00000329151 ENY2Q9NPA8 101 aa17.18■□□□□ 0.34
TMEM54-201ENST00000329151 CCDC160A6NGH7 325 aa17.17■□□□□ 0.34
TMEM54-201ENST00000329151 CTDSP2O14595 271 aa17.17■□□□□ 0.34
TMEM54-201ENST00000329151 CA1P00915 261 aaPredicted RBP17.17■□□□□ 0.34
TMEM54-201ENST00000329151 IFNA17P01571 189 aa17.17■□□□□ 0.34
TMEM54-201ENST00000329151 SPINK9Q5DT21 86 aa17.17■□□□□ 0.34
TMEM54-201ENST00000329151 RNASE11Q8TAA1 199 aaKnown RBP17.17■□□□□ 0.34
TMEM54-201ENST00000329151 TOMM20LQ6UXN7 152 aa17.16■□□□□ 0.34
TMEM54-201ENST00000329151 ZNF600Q6ZNG1 722 aa17.16■□□□□ 0.34
TMEM54-201ENST00000329151 NARS2Q96I59 477 aaKnown RBP17.16■□□□□ 0.34
TMEM54-201ENST00000329151 RABAC1Q9UI14 185 aa17.16■□□□□ 0.34
TMEM54-201ENST00000329151 CORTO00230 105 aa17.15■□□□□ 0.34
TMEM54-201ENST00000329151 DFFBO76075 338 aa17.15■□□□□ 0.34
TMEM54-201ENST00000329151 HOXA1P49639 335 aaPredicted RBP17.15■□□□□ 0.34
TMEM54-201ENST00000329151 TMEM187Q14656 261 aa17.15■□□□□ 0.34
TMEM54-201ENST00000329151 CENPSQ8N2Z9 138 aa17.15■□□□□ 0.34
TMEM54-201ENST00000329151 ST8SIA2Q92186 375 aa17.15■□□□□ 0.34
TMEM54-201ENST00000329151 ZNF486Q96H40 463 aaPredicted RBP17.15■□□□□ 0.34
TMEM54-201ENST00000329151 PUS1Q9Y606 427 aaKnown RBP eCLIP17.15■□□□□ 0.34
TMEM54-201ENST00000329151 A0A1W2PS18 150 aa17.14■□□□□ 0.33
TMEM54-201ENST00000329151 M0QYG6 137 aa17.14■□□□□ 0.33
TMEM54-201ENST00000329151 IGKV1-39P01597 117 aa17.14■□□□□ 0.33
TMEM54-201ENST00000329151 IGKV1D-39P04432 117 aa17.14■□□□□ 0.33
TMEM54-201ENST00000329151 TRIM16LQ309B1 348 aa17.14■□□□□ 0.33
TMEM54-201ENST00000329151 RNASE10Q5GAN6 216 aaKnown RBP17.14■□□□□ 0.33
TMEM54-201ENST00000329151 STHQ8IWL8 128 aa17.14■□□□□ 0.33
TMEM54-201ENST00000329151 C15orf40Q8WUR7 153 aa17.14■□□□□ 0.33
TMEM54-201ENST00000329151 SLIRPQ9GZT3 109 aaKnown RBP17.14■□□□□ 0.33
TMEM54-201ENST00000329151 MS4A6AQ9H2W1 248 aa17.14■□□□□ 0.33
TMEM54-201ENST00000329151 C11orf68Q9H3H3 251 aaKnown RBP17.14■□□□□ 0.33
TMEM54-201ENST00000329151 IGHV3-66A0A0C4DH42 116 aa17.13■□□□□ 0.33
TMEM54-201ENST00000329151 DEFB131AP59861 70 aa17.13■□□□□ 0.33
TMEM54-201ENST00000329151 NANOS2P60321 138 aaKnown RBP17.13■□□□□ 0.33
TMEM54-201ENST00000329151 RNASE12Q5GAN4 147 aaKnown RBP17.13■□□□□ 0.33
TMEM54-201ENST00000329151 FAM90A2PQ658T7 463 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms