RNA–Protein interactions for RNA: ENST00000328514.11

GINS3-202, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,932 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-202ENST00000328514 TAX1BP3O14907 124 aa9.23□□□□□ -0.93
GINS3-202ENST00000328514 HLA-DRB1P01911 266 aa9.23□□□□□ -0.93
GINS3-202ENST00000328514 LOXL3P58215 753 aa9.23□□□□□ -0.93
GINS3-202ENST00000328514 Q56UQ5 140 aa9.23□□□□□ -0.93
GINS3-202ENST00000328514 LYSMD4Q5XG99 296 aa9.23□□□□□ -0.93
GINS3-202ENST00000328514 ZNF826PQ6ZT77 177 aa9.23□□□□□ -0.93
GINS3-202ENST00000328514 SMIM15Q7Z3B0 74 aa9.23□□□□□ -0.93
GINS3-202ENST00000328514 DEFB125Q8N687 156 aa9.23□□□□□ -0.93
GINS3-202ENST00000328514 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.23□□□□□ -0.93
GINS3-202ENST00000328514 NUP35Q8NFH5 326 aa9.23□□□□□ -0.93
GINS3-202ENST00000328514 TRIB1Q96RU8 372 aa9.23□□□□□ -0.93
GINS3-202ENST00000328514 SLC25A33Q9BSK2 321 aa9.23□□□□□ -0.93
GINS3-202ENST00000328514 OBP2BQ9NPH6 170 aa9.23□□□□□ -0.93
GINS3-202ENST00000328514 METRNQ9UJH8 293 aa9.23□□□□□ -0.93
GINS3-202ENST00000328514 ZNF257Q9Y2Q1 563 aa9.23□□□□□ -0.93
GINS3-202ENST00000328514 DOCK10Q96BY6 2186 aa9.22□□□□□ -0.93
GINS3-202ENST00000328514 ACTL6BO94805 426 aa9.22□□□□□ -0.93
GINS3-202ENST00000328514 CELA3BP08861 270 aa9.22□□□□□ -0.93
GINS3-202ENST00000328514 C8orf88P0DMB2 117 aa9.22□□□□□ -0.93
GINS3-202ENST00000328514 MGST1P10620 155 aaKnown RBP9.22□□□□□ -0.93
GINS3-202ENST00000328514 COL8A2P25067 703 aa9.22□□□□□ -0.93
GINS3-202ENST00000328514 MAGEA5P43359 124 aa9.22□□□□□ -0.93
GINS3-202ENST00000328514 MFAP2P55001 183 aa9.22□□□□□ -0.93
GINS3-202ENST00000328514 FAM120AOSQ5T036 256 aa9.22□□□□□ -0.93
GINS3-202ENST00000328514 KLF14Q8TD94 323 aaPredicted RBP9.22□□□□□ -0.93
GINS3-202ENST00000328514 FAM168AQ92567 244 aa9.22□□□□□ -0.93
GINS3-202ENST00000328514 PLEKHA3Q9HB20 300 aa9.22□□□□□ -0.93
GINS3-202ENST00000328514 ENY2Q9NPA8 101 aa9.22□□□□□ -0.93
GINS3-202ENST00000328514 SERTAD4Q9NUC0 356 aa9.22□□□□□ -0.93
GINS3-202ENST00000328514 GNG12Q9UBI6 72 aa9.22□□□□□ -0.93
GINS3-202ENST00000328514 IGKV1OR2-108A0A075B7D4 117 aa9.21□□□□□ -0.93
GINS3-202ENST00000328514 PSMB11A5LHX3 300 aa9.21□□□□□ -0.93
GINS3-202ENST00000328514 OR7C2O60412 319 aa9.21□□□□□ -0.93
GINS3-202ENST00000328514 VAMP3Q15836 100 aa9.21□□□□□ -0.93
GINS3-202ENST00000328514 OCIAD2Q56VL3 154 aa9.21□□□□□ -0.93
GINS3-202ENST00000328514 RPL39P5Q59GN2 51 aa9.21□□□□□ -0.93
GINS3-202ENST00000328514 OR4A47Q6IF82 309 aa9.21□□□□□ -0.93
GINS3-202ENST00000328514 TMEM251Q8N6I4 163 aa9.21□□□□□ -0.93
GINS3-202ENST00000328514 CD177Q8N6Q3 437 aa9.21□□□□□ -0.93
GINS3-202ENST00000328514 TPRX1Q8N7U7 411 aa9.21□□□□□ -0.93
GINS3-202ENST00000328514 CHCHD1Q96BP2 118 aaKnown RBP9.21□□□□□ -0.93
GINS3-202ENST00000328514 SMIM12Q96EX1 92 aa9.21□□□□□ -0.93
GINS3-202ENST00000328514 FAM167A-AS1Q96KT0 104 aa9.21□□□□□ -0.93
GINS3-202ENST00000328514 CST9LQ9H4G1 147 aa9.21□□□□□ -0.93
GINS3-202ENST00000328514 NCOR1P1Q9H4R4 102 aa9.21□□□□□ -0.93
GINS3-202ENST00000328514 IDI2-AS1Q9NZ38 188 aa9.21□□□□□ -0.93
GINS3-202ENST00000328514 DOCK7Q96N67 2140 aa9.21□□□□□ -0.93
GINS3-202ENST00000328514 IGHV3-64DA0A0J9YX35 117 aa9.21□□□□□ -0.94
GINS3-202ENST00000328514 CA1P00915 261 aaPredicted RBP9.21□□□□□ -0.94
GINS3-202ENST00000328514 MPV17P39210 176 aa9.21□□□□□ -0.94
GINS3-202ENST00000328514 CXCL12P48061 93 aa9.21□□□□□ -0.94
GINS3-202ENST00000328514 ZNF134P52741 427 aa9.21□□□□□ -0.94
GINS3-202ENST00000328514 BVES-AS1Q5T3Y7 98 aa9.21□□□□□ -0.94
GINS3-202ENST00000328514 C12orf54Q6X4T0 127 aa9.21□□□□□ -0.94
GINS3-202ENST00000328514 SPATA12Q7Z6I5 190 aa9.21□□□□□ -0.94
GINS3-202ENST00000328514 URB1-AS1Q96HZ7 61 aa9.21□□□□□ -0.94
GINS3-202ENST00000328514 DCTN5Q9BTE1 182 aa9.21□□□□□ -0.94
GINS3-202ENST00000328514 C7orf69Q9H7B7 122 aa9.21□□□□□ -0.94
GINS3-202ENST00000328514 DUSP13Q9UII6 198 aa9.21□□□□□ -0.94
GINS3-202ENST00000328514 PRNDQ9UKY0 176 aa9.21□□□□□ -0.94
GINS3-202ENST00000328514 FASNP49327 2511 aaKnown RBP9.2□□□□□ -0.94
GINS3-202ENST00000328514 OR4C46A6NHA9 309 aa9.2□□□□□ -0.94
GINS3-202ENST00000328514 DUSP3P51452 185 aaPredicted RBP9.2□□□□□ -0.94
GINS3-202ENST00000328514 RPL8P62917 257 aaKnown RBP9.2□□□□□ -0.94
GINS3-202ENST00000328514 PRCDQ00LT1 54 aa9.2□□□□□ -0.94
GINS3-202ENST00000328514 C2orf83Q53S99 150 aa9.2□□□□□ -0.94
GINS3-202ENST00000328514 MPV17L2Q567V2 206 aa9.2□□□□□ -0.94
GINS3-202ENST00000328514 INO80CQ6PI98 192 aaPredicted RBP9.2□□□□□ -0.94
GINS3-202ENST00000328514 NHLRC2Q8NBF2 726 aa9.2□□□□□ -0.94
GINS3-202ENST00000328514 NUDT10Q8NFP7 164 aa9.2□□□□□ -0.94
GINS3-202ENST00000328514 SNRNP40Q96DI7 357 aaKnown RBP9.2□□□□□ -0.94
GINS3-202ENST00000328514 NUDT11Q96G61 164 aa9.2□□□□□ -0.94
GINS3-202ENST00000328514 ADTRPQ96IZ2 230 aa9.2□□□□□ -0.94
GINS3-202ENST00000328514 C12orf49Q9H741 205 aa9.2□□□□□ -0.94
GINS3-202ENST00000328514 GCM1Q9NP62 436 aa9.2□□□□□ -0.94
GINS3-202ENST00000328514 PILRBQ9UKJ0 227 aa9.2□□□□□ -0.94
GINS3-202ENST00000328514 SOX21Q9Y651 276 aaPredicted RBP9.2□□□□□ -0.94
GINS3-202ENST00000328514 SYS1-DBNDD2H3BUS1 97 aa9.19□□□□□ -0.94
GINS3-202ENST00000328514 MGST3O14880 152 aa9.19□□□□□ -0.94
GINS3-202ENST00000328514 TOX4O94842 621 aa9.19□□□□□ -0.94
GINS3-202ENST00000328514 HIST1H1EP10412 219 aaKnown RBP9.19□□□□□ -0.94
GINS3-202ENST00000328514 PRDX2P32119 198 aa9.19□□□□□ -0.94
GINS3-202ENST00000328514 RNASEKQ6P5S7 137 aaKnown RBP9.19□□□□□ -0.94
GINS3-202ENST00000328514 CXorf67Q86X51 503 aaPredicted RBP9.19□□□□□ -0.94
GINS3-202ENST00000328514 CT55Q8WUE5 264 aa9.19□□□□□ -0.94
GINS3-202ENST00000328514 ZNF714Q96N38 554 aa9.19□□□□□ -0.94
GINS3-202ENST00000328514 ZNF355PQ9NSJ1 428 aa9.19□□□□□ -0.94
GINS3-202ENST00000328514 AMMECR1Q9Y4X0 333 aaPredicted RBP9.19□□□□□ -0.94
GINS3-202ENST00000328514 ZNF292O60281 2723 aa9.19□□□□□ -0.94
GINS3-202ENST00000328514 CD5LO43866 347 aa9.19□□□□□ -0.94
GINS3-202ENST00000328514 TFF1P04155 84 aa9.19□□□□□ -0.94
GINS3-202ENST00000328514 OR5AL1P0C617 328 aa9.19□□□□□ -0.94
GINS3-202ENST00000328514 CGB3P0DN86 165 aa9.19□□□□□ -0.94
GINS3-202ENST00000328514 CGB7P0DN87 165 aa9.19□□□□□ -0.94
GINS3-202ENST00000328514 CT83Q5H943 113 aa9.19□□□□□ -0.94
GINS3-202ENST00000328514 ABHD17BQ5VST6 288 aa9.19□□□□□ -0.94
GINS3-202ENST00000328514 SLC25A34Q6PIV7 304 aa9.19□□□□□ -0.94
GINS3-202ENST00000328514 C1orf229Q6ZS94 237 aaPredicted RBP9.19□□□□□ -0.94
GINS3-202ENST00000328514 KIR3DL3Q8N743 410 aa9.19□□□□□ -0.94
GINS3-202ENST00000328514 OR1L8Q8NGR8 309 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms