RNA–Protein interactions for RNA: ENST00000327367.8

SMAD3-201, Transcript of SMAD family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD3, Length 6,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-201ENST00000327367 TEX38Q6PEX7 206 aa13.82□□□□□ -0.2
SMAD3-201ENST00000327367 CIARTQ8N365 385 aaPredicted RBP13.82□□□□□ -0.2
SMAD3-201ENST00000327367 ATG2BQ96BY7 2078 aa13.82□□□□□ -0.2
SMAD3-201ENST00000327367 H7C1H1 209 aa13.82□□□□□ -0.2
SMAD3-201ENST00000327367 MESP2Q0VG99 397 aa13.82□□□□□ -0.2
SMAD3-201ENST00000327367 NPSP0C0P6 89 aa13.82□□□□□ -0.2
SMAD3-201ENST00000327367 C2orf82Q6UX34 121 aa13.82□□□□□ -0.2
SMAD3-201ENST00000327367 SPTBP11277 2137 aa13.82□□□□□ -0.2
SMAD3-201ENST00000327367 SLC25A20O43772 301 aa13.82□□□□□ -0.2
SMAD3-201ENST00000327367 IL9P15248 144 aa13.82□□□□□ -0.2
SMAD3-201ENST00000327367 DNM1P46Q6ZS02 220 aa13.81□□□□□ -0.2
SMAD3-201ENST00000327367 ATP5L2Q7Z4Y8 100 aa13.81□□□□□ -0.2
SMAD3-201ENST00000327367 FBXL7Q9UJT9 491 aa13.81□□□□□ -0.2
SMAD3-201ENST00000327367 NRAPQ86VF7 1730 aa13.81□□□□□ -0.2
SMAD3-201ENST00000327367 FOXH1O75593 365 aa13.81□□□□□ -0.2
SMAD3-201ENST00000327367 CD5P06127 495 aa13.81□□□□□ -0.2
SMAD3-201ENST00000327367 CD7P09564 240 aa13.81□□□□□ -0.2
SMAD3-201ENST00000327367 CD28P10747 220 aa13.81□□□□□ -0.2
SMAD3-201ENST00000327367 IFI27P40305 119 aaPredicted RBP13.81□□□□□ -0.2
SMAD3-201ENST00000327367 CHCHD1Q96BP2 118 aaKnown RBP13.81□□□□□ -0.2
SMAD3-201ENST00000327367 COL22A1Q8NFW1 1626 aaPredicted RBP13.81□□□□□ -0.2
SMAD3-201ENST00000327367 SCN9AQ15858 1988 aa13.81□□□□□ -0.2
SMAD3-201ENST00000327367 GTF3AQ92664 365 aaKnown RBP13.81□□□□□ -0.2
SMAD3-201ENST00000327367 FOCADQ5VW36 1801 aa13.81□□□□□ -0.2
SMAD3-201ENST00000327367 MALP21145 153 aa13.81□□□□□ -0.2
SMAD3-201ENST00000327367 ZNF138P52744 262 aa13.81□□□□□ -0.2
SMAD3-201ENST00000327367 KIAA1551Q9HCM1 1747 aa13.81□□□□□ -0.2
SMAD3-201ENST00000327367 C3orf79P0CE67 100 aa13.8□□□□□ -0.2
SMAD3-201ENST00000327367 HTN3P15516 51 aa13.8□□□□□ -0.2
SMAD3-201ENST00000327367 PILRAQ9UKJ1 303 aa13.8□□□□□ -0.2
SMAD3-201ENST00000327367 TRAV8-3A0A0A6YYJ7 113 aa13.8□□□□□ -0.2
SMAD3-201ENST00000327367 MRPL20Q9BYC9 149 aaKnown RBP13.8□□□□□ -0.2
SMAD3-201ENST00000327367 NPIPB13A6NJU9 1138 aa13.8□□□□□ -0.2
SMAD3-201ENST00000327367 NPIPB5A8MRT5 1133 aa13.8□□□□□ -0.2
SMAD3-201ENST00000327367 FHL5Q5TD97 284 aa13.8□□□□□ -0.2
SMAD3-201ENST00000327367 LINC01587Q99440 93 aa13.8□□□□□ -0.2
SMAD3-201ENST00000327367 TM2D1Q9BX74 207 aa13.8□□□□□ -0.2
SMAD3-201ENST00000327367 UMODP07911 640 aa13.8□□□□□ -0.2
SMAD3-201ENST00000327367 ACTL10Q5JWF8 245 aa13.8□□□□□ -0.2
SMAD3-201ENST00000327367 SPATA31B1PQ5VZV4 182 aa13.8□□□□□ -0.2
SMAD3-201ENST00000327367 ZNF501Q96CX3 271 aaPredicted RBP13.8□□□□□ -0.2
SMAD3-201ENST00000327367 IGKV1D-33P01593 117 aa13.8□□□□□ -0.2
SMAD3-201ENST00000327367 IGKV1-33P01594 117 aa13.8□□□□□ -0.2
SMAD3-201ENST00000327367 SLC22A18ASQ8N1D0 253 aa13.8□□□□□ -0.2
SMAD3-201ENST00000327367 C9orf153Q5TBE3 101 aa13.79□□□□□ -0.2
SMAD3-201ENST00000327367 TMEM54Q969K7 222 aa13.79□□□□□ -0.2
SMAD3-201ENST00000327367 OTORQ9NRC9 128 aa13.79□□□□□ -0.2
SMAD3-201ENST00000327367 A0A0G2JMM0 328 aa13.79□□□□□ -0.2
SMAD3-201ENST00000327367 A0A1W2PPB8 328 aa13.79□□□□□ -0.2
SMAD3-201ENST00000327367 KIR3DP1A8MWS1 328 aa13.79□□□□□ -0.2
SMAD3-201ENST00000327367 HGFACQ04756 655 aa13.79□□□□□ -0.2
SMAD3-201ENST00000327367 CST9LQ9H4G1 147 aa13.79□□□□□ -0.2
SMAD3-201ENST00000327367 OSTCQ9NRP0 149 aa13.79□□□□□ -0.2
SMAD3-201ENST00000327367 KNL1Q8NG31 2342 aa13.79□□□□□ -0.2
SMAD3-201ENST00000327367 IGHMP01871 453 aa13.79□□□□□ -0.2
SMAD3-201ENST00000327367 RAB9AP51151 201 aa13.79□□□□□ -0.2
SMAD3-201ENST00000327367 MAFAQ8NHW3 353 aaPredicted RBP13.79□□□□□ -0.2
SMAD3-201ENST00000327367 SEPSECSQ9HD40 501 aaKnown RBP13.79□□□□□ -0.2
SMAD3-201ENST00000327367 D6R8Y8 96 aa13.79□□□□□ -0.2
SMAD3-201ENST00000327367 CDKN1AP38936 164 aa13.79□□□□□ -0.2
SMAD3-201ENST00000327367 ACP7Q6ZNF0 438 aa13.79□□□□□ -0.2
SMAD3-201ENST00000327367 MS4A6AQ9H2W1 248 aa13.79□□□□□ -0.2
SMAD3-201ENST00000327367 PLNP26678 52 aa13.78□□□□□ -0.2
SMAD3-201ENST00000327367 TMEM42Q69YG0 159 aa13.78□□□□□ -0.2
SMAD3-201ENST00000327367 SRSF8Q9BRL6 282 aaKnown RBP13.78□□□□□ -0.2
SMAD3-201ENST00000327367 TRPM6Q9BX84 2022 aa13.78□□□□□ -0.2
SMAD3-201ENST00000327367 STARD6P59095 220 aa13.78□□□□□ -0.2
SMAD3-201ENST00000327367 GAGE2AQ6NT46 116 aa13.78□□□□□ -0.2
SMAD3-201ENST00000327367 C1orf210Q8IVY1 113 aa13.78□□□□□ -0.2
SMAD3-201ENST00000327367 PILRBQ9UKJ0 227 aa13.78□□□□□ -0.2
SMAD3-201ENST00000327367 Q6AWC8 147 aa13.78□□□□□ -0.2
SMAD3-201ENST00000327367 LINC00158P58513 81 aa13.78□□□□□ -0.2
SMAD3-201ENST00000327367 TMEM171Q8WVE6 324 aa13.78□□□□□ -0.2
SMAD3-201ENST00000327367 YAE1D1Q9NRH1 226 aa13.78□□□□□ -0.2
SMAD3-201ENST00000327367 KIF13BQ9NQT8 1826 aa13.78□□□□□ -0.2
SMAD3-201ENST00000327367 LY75O60449 1722 aa13.78□□□□□ -0.2
SMAD3-201ENST00000327367 A0A1B0GUS0 222 aa13.78□□□□□ -0.2
SMAD3-201ENST00000327367 ASCL2Q99929 193 aa13.78□□□□□ -0.2
SMAD3-201ENST00000327367 WBP1LQ9NX94 342 aa13.77□□□□□ -0.2
SMAD3-201ENST00000327367 A0A1W2PQF6 199 aa13.77□□□□□ -0.2
SMAD3-201ENST00000327367 IGHV3-11P01762 117 aa13.77□□□□□ -0.21
SMAD3-201ENST00000327367 CENPVQ7Z7K6 275 aaPredicted RBP13.77□□□□□ -0.21
SMAD3-201ENST00000327367 C1orf174Q8IYL3 243 aa13.77□□□□□ -0.21
SMAD3-201ENST00000327367 DLX4Q92988 240 aaPredicted RBP13.77□□□□□ -0.21
SMAD3-201ENST00000327367 NRXN3Q9Y4C0 1643 aa13.77□□□□□ -0.21
SMAD3-201ENST00000327367 EFNB3Q15768 340 aa13.77□□□□□ -0.21
SMAD3-201ENST00000327367 ALS2Q96Q42 1657 aa13.77□□□□□ -0.21
SMAD3-201ENST00000327367 GFRA3O60609 400 aa13.77□□□□□ -0.21
SMAD3-201ENST00000327367 SNRNP200O75643 2136 aaKnown RBP13.77□□□□□ -0.21
SMAD3-201ENST00000327367 SRD5A1P18405 259 aa13.76□□□□□ -0.21
SMAD3-201ENST00000327367 C19orf48Q6RUI8 117 aa13.76□□□□□ -0.21
SMAD3-201ENST00000327367 CYTL1Q9NRR1 136 aa13.76□□□□□ -0.21
SMAD3-201ENST00000327367 TSSC4Q9Y5U2 329 aaPredicted RBP13.76□□□□□ -0.21
SMAD3-201ENST00000327367 LRP5O75197 1615 aa13.76□□□□□ -0.21
SMAD3-201ENST00000327367 IGHV3-73A0A0B4J1V6 119 aa13.76□□□□□ -0.21
SMAD3-201ENST00000327367 MRPL52Q86TS9 123 aaKnown RBP13.76□□□□□ -0.21
SMAD3-201ENST00000327367 FAM216BQ8N7L0 139 aa13.76□□□□□ -0.21
SMAD3-201ENST00000327367 PLPPR1Q8TBJ4 325 aa13.76□□□□□ -0.21
SMAD3-201ENST00000327367 NXT2Q9NPJ8 142 aaKnown RBP13.76□□□□□ -0.21
SMAD3-201ENST00000327367 BCORQ6W2J9 1755 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms