RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 TREM1Q9NP99 234 aa14.94□□□□□ -0.02
EXOSC3-201ENST00000327304 RPRMQ9NS64 109 aa14.94□□□□□ -0.02
EXOSC3-201ENST00000327304 TRAV1-1A0A0B4J248 108 aa14.93□□□□□ -0.02
EXOSC3-201ENST00000327304 A0A1B0GW64 132 aa14.93□□□□□ -0.02
EXOSC3-201ENST00000327304 AGPAT2O15120 278 aa14.93□□□□□ -0.02
EXOSC3-201ENST00000327304 MBP02144 154 aa14.93□□□□□ -0.02
EXOSC3-201ENST00000327304 OPN1MWP04001 364 aa14.93□□□□□ -0.02
EXOSC3-201ENST00000327304 FAM106CPP0CH98 169 aa14.93□□□□□ -0.02
EXOSC3-201ENST00000327304 OPN1MW2P0DN77 364 aa14.93□□□□□ -0.02
EXOSC3-201ENST00000327304 OPN1MW3P0DN78 364 aa14.93□□□□□ -0.02
EXOSC3-201ENST00000327304 MAS1LP35410 378 aa14.93□□□□□ -0.02
EXOSC3-201ENST00000327304 ERHP84090 104 aaKnown RBP14.93□□□□□ -0.02
EXOSC3-201ENST00000327304 MMD2Q8IY49 270 aa14.93□□□□□ -0.02
EXOSC3-201ENST00000327304 ZNF709Q8N972 641 aa14.93□□□□□ -0.02
EXOSC3-201ENST00000327304 PBDC1Q9BVG4 233 aa14.93□□□□□ -0.02
EXOSC3-201ENST00000327304 H3BUX3 64 aa14.92□□□□□ -0.02
EXOSC3-201ENST00000327304 TMEM11P17152 192 aa14.92□□□□□ -0.02
EXOSC3-201ENST00000327304 AKR1C1Q04828 323 aa14.92□□□□□ -0.02
EXOSC3-201ENST00000327304 PSG5Q15238 335 aa14.92□□□□□ -0.02
EXOSC3-201ENST00000327304 NPVFQ9HCQ7 196 aa14.92□□□□□ -0.02
EXOSC3-201ENST00000327304 MAST4O15021 2626 aa14.92□□□□□ -0.02
EXOSC3-201ENST00000327304 PEA15Q15121 130 aa14.92□□□□□ -0.02
EXOSC3-201ENST00000327304 MMDQ15546 238 aa14.92□□□□□ -0.02
EXOSC3-201ENST00000327304 GUK1Q16774 197 aa14.92□□□□□ -0.02
EXOSC3-201ENST00000327304 MRGPRG-AS1Q2M3A8 158 aa14.92□□□□□ -0.02
EXOSC3-201ENST00000327304 MBD3L1Q8WWY6 194 aa14.92□□□□□ -0.02
EXOSC3-201ENST00000327304 SCRT1Q9BWW7 348 aa14.92□□□□□ -0.02
EXOSC3-201ENST00000327304 TPSG1Q9NRR2 321 aa14.92□□□□□ -0.02
EXOSC3-201ENST00000327304 ZFHX3Q15911 3703 aa14.91□□□□□ -0.02
EXOSC3-201ENST00000327304 RNASE2P10153 161 aaKnown RBP14.91□□□□□ -0.02
EXOSC3-201ENST00000327304 PRSS8Q16651 343 aa14.91□□□□□ -0.02
EXOSC3-201ENST00000327304 C10orf91Q5T1B1 145 aa14.91□□□□□ -0.02
EXOSC3-201ENST00000327304 TREML4Q6UXN2 200 aa14.91□□□□□ -0.02
EXOSC3-201ENST00000327304 SMDT1Q9H4I9 107 aa14.91□□□□□ -0.02
EXOSC3-201ENST00000327304 TMEM231Q9H6L2 316 aa14.91□□□□□ -0.02
EXOSC3-201ENST00000327304 VSIRQ9H7M9 311 aa14.91□□□□□ -0.02
EXOSC3-201ENST00000327304 KIAA1456Q9P272 454 aa14.91□□□□□ -0.02
EXOSC3-201ENST00000327304 SIGLEC9Q9Y336 463 aa14.91□□□□□ -0.02
EXOSC3-201ENST00000327304 CGB1A6NKQ9 187 aa14.9□□□□□ -0.02
EXOSC3-201ENST00000327304 IGHV4-59P01825 116 aa14.9□□□□□ -0.02
EXOSC3-201ENST00000327304 LY6EQ16553 131 aa14.9□□□□□ -0.02
EXOSC3-201ENST00000327304 TMEM219Q86XT9 240 aa14.9□□□□□ -0.02
EXOSC3-201ENST00000327304 MRPL41Q8IXM3 137 aaKnown RBP14.9□□□□□ -0.02
EXOSC3-201ENST00000327304 OR10W1Q8NGF6 305 aa14.9□□□□□ -0.02
EXOSC3-201ENST00000327304 SFT2D1Q8WV19 159 aa14.9□□□□□ -0.02
EXOSC3-201ENST00000327304 NSD1Q96L73 2696 aaPredicted RBP14.9□□□□□ -0.02
EXOSC3-201ENST00000327304 NBR2O15453 112 aa14.89□□□□□ -0.03
EXOSC3-201ENST00000327304 ACSM6Q6P461 480 aa14.89□□□□□ -0.03
EXOSC3-201ENST00000327304 NPBQ8NG41 125 aa14.89□□□□□ -0.03
EXOSC3-201ENST00000327304 SEC11CQ9BY50 192 aa14.89□□□□□ -0.03
EXOSC3-201ENST00000327304 FBXL15Q9H469 300 aa14.89□□□□□ -0.03
EXOSC3-201ENST00000327304 PRDM13Q9H4Q3 707 aa14.89□□□□□ -0.03
EXOSC3-201ENST00000327304 METTL1Q9UBP6 276 aaKnown RBP14.89□□□□□ -0.03
EXOSC3-201ENST00000327304 SMCO3A2RU48 225 aa14.89□□□□□ -0.03
EXOSC3-201ENST00000327304 E7EUB6 86 aa14.89□□□□□ -0.03
EXOSC3-201ENST00000327304 APOC3P02656 99 aa14.89□□□□□ -0.03
EXOSC3-201ENST00000327304 IER3P46695 156 aa14.89□□□□□ -0.03
EXOSC3-201ENST00000327304 ELLP55199 621 aaPredicted RBP14.89□□□□□ -0.03
EXOSC3-201ENST00000327304 ARSJQ5FYB0 599 aaPredicted RBP14.89□□□□□ -0.03
EXOSC3-201ENST00000327304 Q6YL49 198 aa14.89□□□□□ -0.03
EXOSC3-201ENST00000327304 PPP1R27Q86WC6 154 aa14.89□□□□□ -0.03
EXOSC3-201ENST00000327304 SIGLECL1Q8N7X8 197 aa14.89□□□□□ -0.03
EXOSC3-201ENST00000327304 RCC1LQ96I51 464 aaKnown RBP14.89□□□□□ -0.03
EXOSC3-201ENST00000327304 CARHSP1Q9Y2V2 147 aaKnown RBP14.89□□□□□ -0.03
EXOSC3-201ENST00000327304 LSM4Q9Y4Z0 139 aaKnown RBP14.89□□□□□ -0.03
EXOSC3-201ENST00000327304 A6NDX4 124 aa14.88□□□□□ -0.03
EXOSC3-201ENST00000327304 INAFM1C9JVW0 142 aa14.88□□□□□ -0.03
EXOSC3-201ENST00000327304 F8W036 122 aa14.88□□□□□ -0.03
EXOSC3-201ENST00000327304 ACTL6BO94805 426 aa14.88□□□□□ -0.03
EXOSC3-201ENST00000327304 NDUFA3O95167 84 aa14.88□□□□□ -0.03
EXOSC3-201ENST00000327304 ADCYAP1P18509 176 aa14.88□□□□□ -0.03
EXOSC3-201ENST00000327304 OPRK1P41145 380 aa14.88□□□□□ -0.03
EXOSC3-201ENST00000327304 SUB1P53999 127 aaKnown RBP eCLIP14.88□□□□□ -0.035e-9■■■■■ 27.8
EXOSC3-201ENST00000327304 ZNF726P1Q15940 193 aa14.88□□□□□ -0.03
EXOSC3-201ENST00000327304 FFAR4Q5NUL3 377 aa14.88□□□□□ -0.03
EXOSC3-201ENST00000327304 EIF5A2Q9GZV4 153 aaKnown RBP14.88□□□□□ -0.03
EXOSC3-201ENST00000327304 KCNIP2Q9NS61 270 aa14.88□□□□□ -0.03
EXOSC3-201ENST00000327304 TNCP24821 2201 aa14.88□□□□□ -0.03
EXOSC3-201ENST00000327304 NCBP2LA6PVI3 153 aaKnown RBP14.87□□□□□ -0.03
EXOSC3-201ENST00000327304 CCL20P78556 96 aa14.87□□□□□ -0.03
EXOSC3-201ENST00000327304 WT1-ASQ06250 92 aa14.87□□□□□ -0.03
EXOSC3-201ENST00000327304 C10orf55Q5SWW7 151 aa14.87□□□□□ -0.03
EXOSC3-201ENST00000327304 TEPPQ6URK8 271 aa14.87□□□□□ -0.03
EXOSC3-201ENST00000327304 RPP25LQ8N5L8 163 aaKnown RBP14.87□□□□□ -0.03
EXOSC3-201ENST00000327304 CDC42EP3Q9UKI2 254 aa14.87□□□□□ -0.03
EXOSC3-201ENST00000327304 M6PRP20645 277 aa14.87□□□□□ -0.03
EXOSC3-201ENST00000327304 GPX4P36969 197 aaPredicted RBP14.87□□□□□ -0.03
EXOSC3-201ENST00000327304 RPL27AP46776 148 aaKnown RBP14.87□□□□□ -0.03
EXOSC3-201ENST00000327304 COMPP49747 757 aaPredicted RBP14.87□□□□□ -0.03
EXOSC3-201ENST00000327304 C5orf64Q2M2E5 130 aa14.87□□□□□ -0.03
EXOSC3-201ENST00000327304 ACOT6Q3I5F7 207 aaPredicted RBP14.87□□□□□ -0.03
EXOSC3-201ENST00000327304 OR10G4Q8NGN3 311 aa14.87□□□□□ -0.03
EXOSC3-201ENST00000327304 OR10G9Q8NGN4 311 aa14.87□□□□□ -0.03
EXOSC3-201ENST00000327304 OR10G7Q8NGN6 311 aa14.87□□□□□ -0.03
EXOSC3-201ENST00000327304 RNASEH2CQ8TDP1 164 aaKnown RBP14.87□□□□□ -0.03
EXOSC3-201ENST00000327304 CACNG8Q8WXS5 425 aa14.87□□□□□ -0.03
EXOSC3-201ENST00000327304 RBM14Q96PK6 669 aaKnown RBP14.87□□□□□ -0.03
EXOSC3-201ENST00000327304 SLC25A33Q9BSK2 321 aa14.87□□□□□ -0.03
EXOSC3-201ENST00000327304 TNFRSF19Q9NS68 423 aa14.87□□□□□ -0.03
EXOSC3-201ENST00000327304 A0A1B0GV50 99 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms