RNA–Protein interactions for RNA: ENST00000324685.10

RNF40-201, Transcript of ring finger protein 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF40, Length 5,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-201ENST00000324685 SLC25A20O43772 301 aa17.59■□□□□ 0.41
RNF40-201ENST00000324685 DPM2O94777 84 aa17.59■□□□□ 0.41
RNF40-201ENST00000324685 DUSP14O95147 198 aaKnown RBP17.59■□□□□ 0.41
RNF40-201ENST00000324685 MPZP25189 248 aa17.59■□□□□ 0.41
RNF40-201ENST00000324685 NXT2Q9NPJ8 142 aaKnown RBP17.59■□□□□ 0.41
RNF40-201ENST00000324685 LOC105371267A0A1B0GV96 52 aa17.59■□□□□ 0.41
RNF40-201ENST00000324685 PPBPP02775 128 aa17.59■□□□□ 0.41
RNF40-201ENST00000324685 CSRP2Q16527 193 aa17.59■□□□□ 0.41
RNF40-201ENST00000324685 TMEM95Q3KNT9 176 aa17.59■□□□□ 0.41
RNF40-201ENST00000324685 MBD3L1Q8WWY6 194 aa17.59■□□□□ 0.41
RNF40-201ENST00000324685 TMEM42Q69YG0 159 aa17.58■□□□□ 0.41
RNF40-201ENST00000324685 LINC00614P0C842 121 aa17.58■□□□□ 0.41
RNF40-201ENST00000324685 TGFAP01135 160 aa17.58■□□□□ 0.4
RNF40-201ENST00000324685 RNF125Q96EQ8 232 aa17.58■□□□□ 0.4
RNF40-201ENST00000324685 SLC25A2Q9BXI2 301 aa17.58■□□□□ 0.4
RNF40-201ENST00000324685 TRAV21A0A0B4J279 112 aa17.58■□□□□ 0.4
RNF40-201ENST00000324685 TMEM167AQ8TBQ9 72 aa17.58■□□□□ 0.4
RNF40-201ENST00000324685 TMEM190Q8WZ59 177 aa17.58■□□□□ 0.4
RNF40-201ENST00000324685 WBP1Q96G27 269 aa17.58■□□□□ 0.4
RNF40-201ENST00000324685 TRAV9-2A0A087WT02 112 aa17.58■□□□□ 0.4
RNF40-201ENST00000324685 MALP21145 153 aa17.58■□□□□ 0.4
RNF40-201ENST00000324685 BTCP35070 178 aa17.58■□□□□ 0.4
RNF40-201ENST00000324685 ZNF362Q5T0B9 420 aaPredicted RBP17.58■□□□□ 0.4
RNF40-201ENST00000324685 CD7P09564 240 aa17.57■□□□□ 0.4
RNF40-201ENST00000324685 ORMDL2Q53FV1 153 aa17.57■□□□□ 0.4
RNF40-201ENST00000324685 IMMP1LQ96LU5 166 aa17.57■□□□□ 0.4
RNF40-201ENST00000324685 DMRTA2Q96SC8 542 aa17.57■□□□□ 0.4
RNF40-201ENST00000324685 GNB1LQ9BYB4 327 aa17.57■□□□□ 0.4
RNF40-201ENST00000324685 TUBGCP6Q96RT7 1819 aa17.57■□□□□ 0.4
RNF40-201ENST00000324685 MORN2Q502X0 79 aa17.57■□□□□ 0.4
RNF40-201ENST00000324685 CHCHD1Q96BP2 118 aaKnown RBP17.57■□□□□ 0.4
RNF40-201ENST00000324685 C7orf69Q9H7B7 122 aa17.57■□□□□ 0.4
RNF40-201ENST00000324685 C1QTNF9P0C862 333 aa17.57■□□□□ 0.4
RNF40-201ENST00000324685 NDUFAF3Q9BU61 184 aa17.57■□□□□ 0.4
RNF40-201ENST00000324685 TRAV8-2A0A0B4J237 113 aa17.57■□□□□ 0.4
RNF40-201ENST00000324685 KIR3DL3Q8N743 410 aa17.57■□□□□ 0.4
RNF40-201ENST00000324685 C11orf68Q9H3H3 251 aaKnown RBP17.57■□□□□ 0.4
RNF40-201ENST00000324685 CELA3BP08861 270 aa17.56■□□□□ 0.4
RNF40-201ENST00000324685 COLCA1Q6ZS62 124 aa17.56■□□□□ 0.4
RNF40-201ENST00000324685 RNF182Q8N6D2 247 aa17.56■□□□□ 0.4
RNF40-201ENST00000324685 CYSLTR1Q9Y271 337 aa17.56■□□□□ 0.4
RNF40-201ENST00000324685 IGKV1D-13A0A0B4J2D9 117 aa17.56■□□□□ 0.4
RNF40-201ENST00000324685 IGKV1-13P0DP09 117 aa17.56■□□□□ 0.4
RNF40-201ENST00000324685 PAX2Q02962 417 aa17.56■□□□□ 0.4
RNF40-201ENST00000324685 ATRAIDQ6UW56 229 aa17.56■□□□□ 0.4
RNF40-201ENST00000324685 SLC25A28Q96A46 364 aa17.56■□□□□ 0.4
RNF40-201ENST00000324685 TMEM133Q9H2Q1 129 aa17.56■□□□□ 0.4
RNF40-201ENST00000324685 COQ2Q96H96 371 aa17.56■□□□□ 0.4
RNF40-201ENST00000324685 IGLV3-19P01714 112 aa17.56■□□□□ 0.4
RNF40-201ENST00000324685 SSBP4Q9BWG4 385 aaPredicted RBP17.56■□□□□ 0.4
RNF40-201ENST00000324685 ARID1AO14497 2285 aa17.55■□□□□ 0.4
RNF40-201ENST00000324685 PRCDQ00LT1 54 aa17.55■□□□□ 0.4
RNF40-201ENST00000324685 PSG8Q9UQ74 426 aa17.55■□□□□ 0.4
RNF40-201ENST00000324685 KNL1Q8NG31 2342 aa17.55■□□□□ 0.4
RNF40-201ENST00000324685 IGHV3OR16-8A0A075B7F1 116 aa17.55■□□□□ 0.4
RNF40-201ENST00000324685 LHX2P50458 406 aa17.55■□□□□ 0.4
RNF40-201ENST00000324685 STHQ8IWL8 128 aa17.55■□□□□ 0.4
RNF40-201ENST00000324685 OR2K2Q8NGT1 345 aa17.55■□□□□ 0.4
RNF40-201ENST00000324685 ZNF837Q96EG3 531 aaPredicted RBP17.55■□□□□ 0.4
RNF40-201ENST00000324685 MRPL14Q6P1L8 145 aaKnown RBP17.55■□□□□ 0.4
RNF40-201ENST00000324685 C9orf106Q8NAJ2 232 aa17.55■□□□□ 0.4
RNF40-201ENST00000324685 NHP2Q9NX24 153 aaKnown RBP17.55■□□□□ 0.4
RNF40-201ENST00000324685 LDLRAD2Q5SZI1 272 aa17.54■□□□□ 0.4
RNF40-201ENST00000324685 LYZL4Q96KX0 146 aa17.54■□□□□ 0.4
RNF40-201ENST00000324685 CHTOPQ9Y3Y2 248 aaKnown RBP17.54■□□□□ 0.4
RNF40-201ENST00000324685 THSD7AQ9UPZ6 1657 aa17.54■□□□□ 0.4
RNF40-201ENST00000324685 UBR3Q6ZT12 1888 aa17.54■□□□□ 0.4
RNF40-201ENST00000324685 FGF16O43320 207 aa17.54■□□□□ 0.4
RNF40-201ENST00000324685 HOXA3O43365 443 aaPredicted RBP17.54■□□□□ 0.4
RNF40-201ENST00000324685 IGHV3-11P01762 117 aa17.54■□□□□ 0.4
RNF40-201ENST00000324685 VDAC2P45880 294 aaPredicted RBP17.54■□□□□ 0.4
RNF40-201ENST00000324685 TRGV11A0A075B6L2 103 aa17.54■□□□□ 0.4
RNF40-201ENST00000324685 ZNF585BQ52M93 769 aa17.54■□□□□ 0.4
RNF40-201ENST00000324685 ATAD5Q96QE3 1844 aa17.54■□□□□ 0.4
RNF40-201ENST00000324685 CCL3L1P16619 93 aa17.54■□□□□ 0.4
RNF40-201ENST00000324685 ATP5L2Q7Z4Y8 100 aa17.54■□□□□ 0.4
RNF40-201ENST00000324685 NPFFR1Q9GZQ6 430 aa17.54■□□□□ 0.4
RNF40-201ENST00000324685 LINC01549A6NIU2 74 aa17.53■□□□□ 0.4
RNF40-201ENST00000324685 LY6G6FQ5SQ64 297 aa17.53■□□□□ 0.4
RNF40-201ENST00000324685 FAM89BQ8N5H3 189 aa17.53■□□□□ 0.4
RNF40-201ENST00000324685 ZNF815PA8K554 130 aa17.53■□□□□ 0.4
RNF40-201ENST00000324685 IGHV4-39P01824 125 aa17.53■□□□□ 0.4
RNF40-201ENST00000324685 NR2C2APQ86WQ0 139 aa17.53■□□□□ 0.4
RNF40-201ENST00000324685 IGKCP01834 107 aa17.53■□□□□ 0.4
RNF40-201ENST00000324685 SLC25A15Q9Y619 301 aa17.53■□□□□ 0.4
RNF40-201ENST00000324685 IGLV3-32A0A0A0MS00 114 aa17.52■□□□□ 0.4
RNF40-201ENST00000324685 F2Z2F3 143 aa17.52■□□□□ 0.4
RNF40-201ENST00000324685 ID3Q02535 119 aa17.52■□□□□ 0.4
RNF40-201ENST00000324685 RNASE6Q93091 150 aaKnown RBP17.52■□□□□ 0.4
RNF40-201ENST00000324685 VKORC1Q9BQB6 163 aa17.52■□□□□ 0.4
RNF40-201ENST00000324685 SRSF7Q16629 238 aaKnown RBP eCLIP17.52■□□□□ 0.4
RNF40-201ENST00000324685 TSKUQ8WUA8 353 aa17.52■□□□□ 0.4
RNF40-201ENST00000324685 ORAOV1Q8WV07 137 aa17.52■□□□□ 0.4
RNF40-201ENST00000324685 IGLV3-12A0A075B6K2 115 aa17.52■□□□□ 0.39
RNF40-201ENST00000324685 UMODP07911 640 aa17.52■□□□□ 0.39
RNF40-201ENST00000324685 SRSF3P84103 164 aaKnown RBP17.52■□□□□ 0.39
RNF40-201ENST00000324685 RAMP3O60896 148 aa17.51■□□□□ 0.39
RNF40-201ENST00000324685 TBX6O95947 436 aaPredicted RBP17.51■□□□□ 0.39
RNF40-201ENST00000324685 PRSS22Q9GZN4 317 aa17.51■□□□□ 0.39
RNF40-201ENST00000324685 PYYP10082 97 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms