RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 COL5A1-AS1Q5SY13 56 aa10.32□□□□□ -0.76
DDX39A-202ENST00000324340 LSM10Q969L4 123 aaKnown RBP10.32□□□□□ -0.76
DDX39A-202ENST00000324340 TBX15Q96SF7 602 aa10.32□□□□□ -0.76
DDX39A-202ENST00000324340 ATG101Q9BSB4 218 aa10.32□□□□□ -0.76
DDX39A-202ENST00000324340 PCGF1Q9BSM1 259 aa10.32□□□□□ -0.76
DDX39A-202ENST00000324340 PSMG3Q9BT73 122 aaPredicted RBP10.32□□□□□ -0.76
DDX39A-202ENST00000324340 GSX1Q9H4S2 264 aaPredicted RBP10.32□□□□□ -0.76
DDX39A-202ENST00000324340 NAGKQ9UJ70 344 aa10.32□□□□□ -0.76
DDX39A-202ENST00000324340 AMMECR1Q9Y4X0 333 aaPredicted RBP10.32□□□□□ -0.76
DDX39A-202ENST00000324340 CRYBG3Q68DQ2 2970 aa10.32□□□□□ -0.76
DDX39A-202ENST00000324340 ARHGAP32A7KAX9 2087 aa10.31□□□□□ -0.76
DDX39A-202ENST00000324340 A0A1W2PN81 502 aa10.31□□□□□ -0.76
DDX39A-202ENST00000324340 TMEM250H0YL14 139 aa10.31□□□□□ -0.76
DDX39A-202ENST00000324340 FCGR3BO75015 233 aa10.31□□□□□ -0.76
DDX39A-202ENST00000324340 HPRT1P00492 218 aa10.31□□□□□ -0.76
DDX39A-202ENST00000324340 HRASP01112 189 aa10.31□□□□□ -0.76
DDX39A-202ENST00000324340 P0C879 139 aa10.31□□□□□ -0.76
DDX39A-202ENST00000324340 SLC25A6P12236 298 aa10.31□□□□□ -0.76
DDX39A-202ENST00000324340 COX7A1P24310 79 aa10.31□□□□□ -0.76
DDX39A-202ENST00000324340 CHRNA7P36544 502 aa10.31□□□□□ -0.76
DDX39A-202ENST00000324340 PAFAH1B2P68402 229 aa10.31□□□□□ -0.76
DDX39A-202ENST00000324340 ZNF816Q0VGE8 651 aaPredicted RBP10.31□□□□□ -0.76
DDX39A-202ENST00000324340 MRPL41Q8IXM3 137 aaKnown RBP10.31□□□□□ -0.76
DDX39A-202ENST00000324340 OR5AN1Q8NGI8 311 aa10.31□□□□□ -0.76
DDX39A-202ENST00000324340 OR51G1Q8NGK1 321 aa10.31□□□□□ -0.76
DDX39A-202ENST00000324340 K7EP13 123 aa10.3□□□□□ -0.76
DDX39A-202ENST00000324340 S1PR2O95136 353 aa10.3□□□□□ -0.76
DDX39A-202ENST00000324340 VENTXO95231 258 aa10.3□□□□□ -0.76
DDX39A-202ENST00000324340 IGKV1-5P01602 117 aa10.3□□□□□ -0.76
DDX39A-202ENST00000324340 IL6RP08887 468 aaPredicted RBP10.3□□□□□ -0.76
DDX39A-202ENST00000324340 CD99P14209 185 aa10.3□□□□□ -0.76
DDX39A-202ENST00000324340 CDKN1BP46527 198 aa10.3□□□□□ -0.76
DDX39A-202ENST00000324340 VAMP2P63027 116 aa10.3□□□□□ -0.76
DDX39A-202ENST00000324340 SERF2P84101 59 aa10.3□□□□□ -0.76
DDX39A-202ENST00000324340 PRB3Q04118 309 aaPredicted RBP10.3□□□□□ -0.76
DDX39A-202ENST00000324340 DIAPH2-AS1Q14236 149 aa10.3□□□□□ -0.76
DDX39A-202ENST00000324340 ARSJQ5FYB0 599 aaPredicted RBP10.3□□□□□ -0.76
DDX39A-202ENST00000324340 TEX38Q6PEX7 206 aa10.3□□□□□ -0.76
DDX39A-202ENST00000324340 TMEM252Q8N6L7 170 aa10.3□□□□□ -0.76
DDX39A-202ENST00000324340 OR2D3Q8NGH3 330 aa10.3□□□□□ -0.76
DDX39A-202ENST00000324340 OR4S2Q8NH73 311 aa10.3□□□□□ -0.76
DDX39A-202ENST00000324340 PINX1Q96BK5 328 aaKnown RBP10.3□□□□□ -0.76
DDX39A-202ENST00000324340 ATP5SQ99766 215 aa10.3□□□□□ -0.76
DDX39A-202ENST00000324340 FOXC2Q99958 501 aa10.3□□□□□ -0.76
DDX39A-202ENST00000324340 NABP2Q9BQ15 211 aa10.3□□□□□ -0.76
DDX39A-202ENST00000324340 MRPL20Q9BYC9 149 aaKnown RBP10.3□□□□□ -0.76
DDX39A-202ENST00000324340 LPAR2Q9HBW0 351 aa10.3□□□□□ -0.76
DDX39A-202ENST00000324340 A0A0G2JRQ6 117 aa10.29□□□□□ -0.76
DDX39A-202ENST00000324340 IGSF23A1L1A6 192 aa10.29□□□□□ -0.76
DDX39A-202ENST00000324340 MAP1LC3B2A6NCE7 125 aa10.29□□□□□ -0.76
DDX39A-202ENST00000324340 H0YJW9 148 aa10.29□□□□□ -0.76
DDX39A-202ENST00000324340 H7BYZ3 331 aa10.29□□□□□ -0.76
DDX39A-202ENST00000324340 IFNA5P01569 189 aa10.29□□□□□ -0.76
DDX39A-202ENST00000324340 NPSP0C0P6 89 aa10.29□□□□□ -0.76
DDX39A-202ENST00000324340 ESDP10768 282 aa10.29□□□□□ -0.76
DDX39A-202ENST00000324340 GATA3P23771 443 aa10.29□□□□□ -0.76
DDX39A-202ENST00000324340 HTR1DP28221 377 aa10.29□□□□□ -0.76
DDX39A-202ENST00000324340 BRS3P32247 399 aa10.29□□□□□ -0.76
DDX39A-202ENST00000324340 NKX2-1P43699 371 aaPredicted RBP10.29□□□□□ -0.76
DDX39A-202ENST00000324340 UBE2E1P51965 193 aa10.29□□□□□ -0.76
DDX39A-202ENST00000324340 RAB11AP62491 216 aa10.29□□□□□ -0.76
DDX39A-202ENST00000324340 KLRD1Q13241 179 aa10.29□□□□□ -0.76
DDX39A-202ENST00000324340 LDLRAD2Q5SZI1 272 aa10.29□□□□□ -0.76
DDX39A-202ENST00000324340 KCNIP4Q6PIL6 250 aa10.29□□□□□ -0.76
DDX39A-202ENST00000324340 TEX43Q6ZNM6 134 aa10.29□□□□□ -0.76
DDX39A-202ENST00000324340 LINC01356Q8N9X3 169 aa10.29□□□□□ -0.76
DDX39A-202ENST00000324340 ORAOV1Q8WV07 137 aa10.29□□□□□ -0.76
DDX39A-202ENST00000324340 GPR146Q96CH1 333 aa10.29□□□□□ -0.76
DDX39A-202ENST00000324340 MAP1LC3BQ9GZQ8 125 aa10.29□□□□□ -0.76
DDX39A-202ENST00000324340 CELSR2Q9HCU4 2923 aa10.29□□□□□ -0.76
DDX39A-202ENST00000324340 ABCA2Q9BZC7 2435 aa10.29□□□□□ -0.76
DDX39A-202ENST00000324340 RNF223E7ERA6 249 aa10.28□□□□□ -0.76
DDX39A-202ENST00000324340 KBTBD11O94819 623 aa10.28□□□□□ -0.76
DDX39A-202ENST00000324340 MC5RP33032 325 aa10.28□□□□□ -0.76
DDX39A-202ENST00000324340 CEACAM3P40198 252 aa10.28□□□□□ -0.76
DDX39A-202ENST00000324340 CNN1P51911 297 aaKnown RBP10.28□□□□□ -0.76
DDX39A-202ENST00000324340 RPS20P60866 119 aaKnown RBP10.28□□□□□ -0.76
DDX39A-202ENST00000324340 SELENOTP62341 195 aa10.28□□□□□ -0.76
DDX39A-202ENST00000324340 POU2AF1Q16633 256 aa10.28□□□□□ -0.76
DDX39A-202ENST00000324340 RTL8BQ17RB0 113 aa10.28□□□□□ -0.76
DDX39A-202ENST00000324340 TMEM183BQ1AE95 376 aa10.28□□□□□ -0.76
DDX39A-202ENST00000324340 TPTE2P1Q5T6R2 138 aa10.28□□□□□ -0.76
DDX39A-202ENST00000324340 MINOS1Q5TGZ0 78 aa10.28□□□□□ -0.76
DDX39A-202ENST00000324340 PDPNQ86YL7 162 aa10.28□□□□□ -0.76
DDX39A-202ENST00000324340 C22orf15Q8WYQ4 148 aa10.28□□□□□ -0.76
DDX39A-202ENST00000324340 Q96MF0 132 aa10.28□□□□□ -0.76
DDX39A-202ENST00000324340 SLC35D1Q9NTN3 355 aa10.28□□□□□ -0.76
DDX39A-202ENST00000324340 DPM3Q9P2X0 92 aa10.28□□□□□ -0.76
DDX39A-202ENST00000324340 TBL2Q9Y4P3 447 aaKnown RBP10.28□□□□□ -0.76
DDX39A-202ENST00000324340 MINOS1-NBL1R4GNA1 71 aa10.28□□□□□ -0.76
DDX39A-202ENST00000324340 SPG11Q96JI7 2443 aa10.28□□□□□ -0.76
DDX39A-202ENST00000324340 TRAV9-1A0A075B6T8 112 aa10.27□□□□□ -0.76
DDX39A-202ENST00000324340 IGHV1-3A0A0C4DH29 117 aa10.27□□□□□ -0.76
DDX39A-202ENST00000324340 A0A1W2PPI3 338 aa10.27□□□□□ -0.76
DDX39A-202ENST00000324340 FAM90A9PA6NNJ1 464 aa10.27□□□□□ -0.76
DDX39A-202ENST00000324340 OOSP1A8MZH6 123 aa10.27□□□□□ -0.76
DDX39A-202ENST00000324340 KRASP01116 189 aa10.27□□□□□ -0.76
DDX39A-202ENST00000324340 APOA2P02652 100 aa10.27□□□□□ -0.76
DDX39A-202ENST00000324340 G6PCP35575 357 aa10.27□□□□□ -0.76
DDX39A-202ENST00000324340 GALR1P47211 349 aa10.27□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 111.4 ms