RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 DYSFO75923 2080 aa12.72□□□□□ -0.37
VARS2-201ENST00000321897 TMEM210A6NLX4 147 aa12.72□□□□□ -0.37
VARS2-201ENST00000321897 IGKV1-5P01602 117 aa12.72□□□□□ -0.37
VARS2-201ENST00000321897 KRTCAP3Q53RY4 240 aa12.72□□□□□ -0.37
VARS2-201ENST00000321897 ZNF324BQ6AW86 544 aaPredicted RBP12.72□□□□□ -0.37
VARS2-201ENST00000321897 KIR3DL3Q8N743 410 aa12.72□□□□□ -0.37
VARS2-201ENST00000321897 LSM10Q969L4 123 aaKnown RBP12.72□□□□□ -0.37
VARS2-201ENST00000321897 MAS1LP35410 378 aa12.72□□□□□ -0.37
VARS2-201ENST00000321897 SPOCK3Q9BQ16 436 aa12.72□□□□□ -0.37
VARS2-201ENST00000321897 IGHV2OR16-5A0A0B4J2B6 119 aa12.71□□□□□ -0.37
VARS2-201ENST00000321897 TEX50A0A1B0GTY4 177 aa12.71□□□□□ -0.37
VARS2-201ENST00000321897 BPIFB3P59826 476 aa12.71□□□□□ -0.37
VARS2-201ENST00000321897 ZNF726P1Q15940 193 aa12.71□□□□□ -0.37
VARS2-201ENST00000321897 ACTL10Q5JWF8 245 aa12.71□□□□□ -0.37
VARS2-201ENST00000321897 ADAMTS9Q9P2N4 1935 aa12.71□□□□□ -0.37
VARS2-201ENST00000321897 IGKV3-7A0A075B6H7 116 aa12.71□□□□□ -0.37
VARS2-201ENST00000321897 OR4C46A6NHA9 309 aa12.71□□□□□ -0.37
VARS2-201ENST00000321897 FAM87AP0C7U9 286 aa12.71□□□□□ -0.37
VARS2-201ENST00000321897 NIT1Q86X76 327 aa12.71□□□□□ -0.37
VARS2-201ENST00000321897 PGLYRP4Q96LB8 373 aa12.71□□□□□ -0.37
VARS2-201ENST00000321897 ABCA2Q9BZC7 2435 aa12.71□□□□□ -0.38
VARS2-201ENST00000321897 PPIAL4DF5H284 164 aa12.71□□□□□ -0.38
VARS2-201ENST00000321897 OR2J3O76001 311 aa12.71□□□□□ -0.38
VARS2-201ENST00000321897 P01737 135 aa12.71□□□□□ -0.38
VARS2-201ENST00000321897 WDR82Q6UXN9 313 aa12.71□□□□□ -0.38
VARS2-201ENST00000321897 SAXO1Q8IYX7 474 aa12.71□□□□□ -0.38
VARS2-201ENST00000321897 STPG3Q8N7X2 389 aa12.71□□□□□ -0.38
VARS2-201ENST00000321897 EAF1Q96JC9 268 aaPredicted RBP12.71□□□□□ -0.38
VARS2-201ENST00000321897 IGHV3OR16-8A0A075B7F1 116 aa12.7□□□□□ -0.38
VARS2-201ENST00000321897 TIMP3P35625 211 aa12.7□□□□□ -0.38
VARS2-201ENST00000321897 PLP1P60201 277 aa12.7□□□□□ -0.38
VARS2-201ENST00000321897 LINC00596Q86U02 117 aa12.7□□□□□ -0.38
VARS2-201ENST00000321897 MS4A5Q9H3V2 200 aa12.7□□□□□ -0.38
VARS2-201ENST00000321897 J3QR89 54 aa12.7□□□□□ -0.38
VARS2-201ENST00000321897 RPL8P62917 257 aaKnown RBP12.7□□□□□ -0.38
VARS2-201ENST00000321897 M0QZ24 198 aa12.7□□□□□ -0.38
VARS2-201ENST00000321897 CA2P00918 260 aa12.7□□□□□ -0.38
VARS2-201ENST00000321897 LINC00614P0C842 121 aa12.7□□□□□ -0.38
VARS2-201ENST00000321897 FAM162BQ5T6X4 162 aa12.7□□□□□ -0.38
VARS2-201ENST00000321897 ASPHD1Q5U4P2 390 aa12.7□□□□□ -0.38
VARS2-201ENST00000321897 PLSCR2Q9NRY7 297 aa12.7□□□□□ -0.38
VARS2-201ENST00000321897 CDX4O14627 284 aaPredicted RBP12.69□□□□□ -0.38
VARS2-201ENST00000321897 CD24P25063 80 aa12.69□□□□□ -0.38
VARS2-201ENST00000321897 CFPP27918 469 aa12.69□□□□□ -0.38
VARS2-201ENST00000321897 VMA21Q3ZAQ7 101 aa12.69□□□□□ -0.38
VARS2-201ENST00000321897 ARL6IP6Q8N6S5 226 aa12.69□□□□□ -0.38
VARS2-201ENST00000321897 SPSB4Q96A44 273 aa12.69□□□□□ -0.38
VARS2-201ENST00000321897 TRAV3A0A0B4J244 114 aa12.69□□□□□ -0.38
VARS2-201ENST00000321897 ISLRO14498 428 aa12.69□□□□□ -0.38
VARS2-201ENST00000321897 IGKV1D-33P01593 117 aa12.69□□□□□ -0.38
VARS2-201ENST00000321897 IGKV1-33P01594 117 aa12.69□□□□□ -0.38
VARS2-201ENST00000321897 TMEM42Q69YG0 159 aa12.69□□□□□ -0.38
VARS2-201ENST00000321897 NUPR1O60356 82 aa12.69□□□□□ -0.38
VARS2-201ENST00000321897 DLX1P56177 255 aa12.69□□□□□ -0.38
VARS2-201ENST00000321897 LINC01560Q8TB33 94 aa12.69□□□□□ -0.38
VARS2-201ENST00000321897 GAL3ST2Q9H3Q3 398 aa12.69□□□□□ -0.38
VARS2-201ENST00000321897 AMY1AP04745 511 aa12.68□□□□□ -0.38
VARS2-201ENST00000321897 Q6ZWC4 215 aa12.68□□□□□ -0.38
VARS2-201ENST00000321897 PDPNQ86YL7 162 aa12.68□□□□□ -0.38
VARS2-201ENST00000321897 LYPD6BQ8NI32 183 aa12.68□□□□□ -0.38
VARS2-201ENST00000321897 SNRNP40Q96DI7 357 aaKnown RBP12.68□□□□□ -0.38
VARS2-201ENST00000321897 LTBP2Q14767 1821 aa12.68□□□□□ -0.38
VARS2-201ENST00000321897 A0A1B0GWJ7 208 aa12.68□□□□□ -0.38
VARS2-201ENST00000321897 ZNF324O75467 553 aaPredicted RBP12.68□□□□□ -0.38
VARS2-201ENST00000321897 MOSP00540 346 aa12.68□□□□□ -0.38
VARS2-201ENST00000321897 IGFBP2P18065 325 aa12.68□□□□□ -0.38
VARS2-201ENST00000321897 AMMECR1LQ6DCA0 310 aa12.68□□□□□ -0.38
VARS2-201ENST00000321897 C12orf54Q6X4T0 127 aa12.68□□□□□ -0.38
VARS2-201ENST00000321897 MIR17HGQ75NE6 70 aa12.68□□□□□ -0.38
VARS2-201ENST00000321897 INSIG2Q9Y5U4 225 aa12.68□□□□□ -0.38
VARS2-201ENST00000321897 USP9YO00507 2555 aaPredicted RBP12.68□□□□□ -0.38
VARS2-201ENST00000321897 PPIAL4EA0A075B759 164 aa12.68□□□□□ -0.38
VARS2-201ENST00000321897 TRAV1-1A0A0B4J248 108 aa12.68□□□□□ -0.38
VARS2-201ENST00000321897 LINC00869P0C866 280 aa12.68□□□□□ -0.38
VARS2-201ENST00000321897 PPIAL4FP0DN26 164 aa12.68□□□□□ -0.38
VARS2-201ENST00000321897 ELOVL5Q9NYP7 299 aa12.68□□□□□ -0.38
VARS2-201ENST00000321897 J3KRW8 73 aa12.67□□□□□ -0.38
VARS2-201ENST00000321897 C3orf79P0CE67 100 aa12.67□□□□□ -0.38
VARS2-201ENST00000321897 MAJINQ3KP22 176 aa12.67□□□□□ -0.38
VARS2-201ENST00000321897 SPATA31B1PQ5VZV4 182 aa12.67□□□□□ -0.38
VARS2-201ENST00000321897 LOXL4Q96JB6 756 aa12.67□□□□□ -0.38
VARS2-201ENST00000321897 NABP2Q9BQ15 211 aa12.67□□□□□ -0.38
VARS2-201ENST00000321897 AHRRA9YTQ3 701 aa12.67□□□□□ -0.38
VARS2-201ENST00000321897 F2Z2F3 143 aa12.67□□□□□ -0.38
VARS2-201ENST00000321897 PRSS1P07477 247 aa12.67□□□□□ -0.38
VARS2-201ENST00000321897 IL6RP08887 468 aaPredicted RBP12.67□□□□□ -0.38
VARS2-201ENST00000321897 OR9G9P0C7N8 305 aa12.67□□□□□ -0.38
VARS2-201ENST00000321897 BTF3P20290 206 aaKnown RBP12.67□□□□□ -0.38
VARS2-201ENST00000321897 PAX9P55771 341 aa12.67□□□□□ -0.38
VARS2-201ENST00000321897 COX19Q49B96 90 aa12.67□□□□□ -0.38
VARS2-201ENST00000321897 ZNF497Q6ZNH5 498 aa12.67□□□□□ -0.38
VARS2-201ENST00000321897 ZNF114Q8NC26 417 aa12.67□□□□□ -0.38
VARS2-201ENST00000321897 MUC21A0A0G2JKD1 596 aa12.67□□□□□ -0.38
VARS2-201ENST00000321897 MUC21A0A140T8X8 626 aa12.67□□□□□ -0.38
VARS2-201ENST00000321897 MLNRO43193 412 aa12.67□□□□□ -0.38
VARS2-201ENST00000321897 KIR2DL2P43627 348 aaPredicted RBP12.67□□□□□ -0.38
VARS2-201ENST00000321897 MPV17L2Q567V2 206 aa12.67□□□□□ -0.38
VARS2-201ENST00000321897 MUC21Q5SSG8 566 aa12.67□□□□□ -0.38
VARS2-201ENST00000321897 C10orf55Q5SWW7 151 aa12.67□□□□□ -0.38
VARS2-201ENST00000321897 FNDC4Q9H6D8 234 aaPredicted RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms