RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 SSBP4Q9BWG4 385 aaPredicted RBP14.66□□□□□ -0.06
PRKCB-202ENST00000321728 IFI27L2Q9H2X8 130 aa14.66□□□□□ -0.06
PRKCB-202ENST00000321728 ABI3Q9P2A4 366 aa14.66□□□□□ -0.06
PRKCB-202ENST00000321728 DUSP13Q9UII6 198 aa14.66□□□□□ -0.06
PRKCB-202ENST00000321728 SMG1Q96Q15 3661 aaKnown RBP14.66□□□□□ -0.06
PRKCB-202ENST00000321728 FABP6P51161 128 aa14.66□□□□□ -0.06
PRKCB-202ENST00000321728 OR8B3Q8NGG8 313 aa14.66□□□□□ -0.06
PRKCB-202ENST00000321728 LRRC29Q8WV35 223 aa14.66□□□□□ -0.06
PRKCB-202ENST00000321728 LOXL4Q96JB6 756 aa14.66□□□□□ -0.06
PRKCB-202ENST00000321728 OR8B2Q96RD0 313 aa14.66□□□□□ -0.06
PRKCB-202ENST00000321728 TRIB1Q96RU8 372 aa14.66□□□□□ -0.06
PRKCB-202ENST00000321728 COMMD5Q9GZQ3 224 aa14.66□□□□□ -0.06
PRKCB-202ENST00000321728 SAP30LQ9HAJ7 183 aa14.66□□□□□ -0.06
PRKCB-202ENST00000321728 H0YJW9 148 aa14.65□□□□□ -0.06
PRKCB-202ENST00000321728 KIR2DS2P43631 304 aa14.65□□□□□ -0.06
PRKCB-202ENST00000321728 CAMPP49913 170 aa14.65□□□□□ -0.06
PRKCB-202ENST00000321728 ARG2P78540 354 aa14.65□□□□□ -0.06
PRKCB-202ENST00000321728 TBR1Q16650 682 aa14.65□□□□□ -0.06
PRKCB-202ENST00000321728 C1orf229Q6ZS94 237 aaPredicted RBP14.65□□□□□ -0.06
PRKCB-202ENST00000321728 FAM90A1Q86YD7 464 aa14.65□□□□□ -0.06
PRKCB-202ENST00000321728 TNFRSF19Q9NS68 423 aa14.65□□□□□ -0.06
PRKCB-202ENST00000321728 TMEM14BQ9NUH8 114 aa14.65□□□□□ -0.06
PRKCB-202ENST00000321728 TP73-AS1Q9UF72 201 aa14.65□□□□□ -0.06
PRKCB-202ENST00000321728 TNCP24821 2201 aa14.65□□□□□ -0.06
PRKCB-202ENST00000321728 IGKV1OR2-108A0A075B7D4 117 aa14.65□□□□□ -0.06
PRKCB-202ENST00000321728 MEOX1P50221 254 aa14.65□□□□□ -0.06
PRKCB-202ENST00000321728 GDF5OSQ5U4N7 250 aa14.65□□□□□ -0.06
PRKCB-202ENST00000321728 FOXA2Q9Y261 457 aaPredicted RBP14.65□□□□□ -0.06
PRKCB-202ENST00000321728 OR51B2Q9Y5P1 312 aa14.65□□□□□ -0.06
PRKCB-202ENST00000321728 A0A1W2PRE2 83 aa14.64□□□□□ -0.07
PRKCB-202ENST00000321728 IGHV1-2P23083 117 aa14.64□□□□□ -0.07
PRKCB-202ENST00000321728 PRR31Q5SQ13 230 aa14.64□□□□□ -0.07
PRKCB-202ENST00000321728 PRR27Q6MZM9 219 aa14.64□□□□□ -0.07
PRKCB-202ENST00000321728 KIR3DL3Q8N743 410 aa14.64□□□□□ -0.07
PRKCB-202ENST00000321728 NUP35Q8NFH5 326 aa14.64□□□□□ -0.07
PRKCB-202ENST00000321728 CLEC5AQ9NY25 188 aa14.64□□□□□ -0.07
PRKCB-202ENST00000321728 AGFG2O95081 481 aa14.64□□□□□ -0.07
PRKCB-202ENST00000321728 UTF1Q5T230 341 aa14.64□□□□□ -0.07
PRKCB-202ENST00000321728 ATP1A1-AS1Q5TC04 95 aa14.64□□□□□ -0.07
PRKCB-202ENST00000321728 RNF24Q9Y225 148 aa14.64□□□□□ -0.07
PRKCB-202ENST00000321728 CER1O95813 267 aa14.63□□□□□ -0.07
PRKCB-202ENST00000321728 LOXL3P58215 753 aa14.63□□□□□ -0.07
PRKCB-202ENST00000321728 UBE2L3P68036 154 aaKnown RBP14.63□□□□□ -0.07
PRKCB-202ENST00000321728 WIPF2Q8TF74 440 aaPredicted RBP14.63□□□□□ -0.07
PRKCB-202ENST00000321728 IDI2-AS1Q9NZ38 188 aa14.63□□□□□ -0.07
PRKCB-202ENST00000321728 RP1L1Q8IWN7 2480 aaPredicted RBP14.63□□□□□ -0.07
PRKCB-202ENST00000321728 C2orf70A6NJV1 201 aa14.63□□□□□ -0.07
PRKCB-202ENST00000321728 C8orf88P0DMB2 117 aa14.63□□□□□ -0.07
PRKCB-202ENST00000321728 RTL8BQ17RB0 113 aa14.63□□□□□ -0.07
PRKCB-202ENST00000321728 DDB2Q92466 427 aa14.63□□□□□ -0.07
PRKCB-202ENST00000321728 TRAV5A0A0B4J249 113 aa14.62□□□□□ -0.07
PRKCB-202ENST00000321728 J3QR06 171 aa14.62□□□□□ -0.07
PRKCB-202ENST00000321728 M0QZ24 198 aa14.62□□□□□ -0.07
PRKCB-202ENST00000321728 MLANAQ16655 118 aa14.62□□□□□ -0.07
PRKCB-202ENST00000321728 MPV17L2Q567V2 206 aa14.62□□□□□ -0.07
PRKCB-202ENST00000321728 RASL11AQ6T310 242 aa14.62□□□□□ -0.07
PRKCB-202ENST00000321728 SPATA12Q7Z6I5 190 aa14.62□□□□□ -0.07
PRKCB-202ENST00000321728 OR9G1Q8NH87 305 aa14.62□□□□□ -0.07
PRKCB-202ENST00000321728 SNRNP40Q96DI7 357 aaKnown RBP14.62□□□□□ -0.07
PRKCB-202ENST00000321728 OR2V2Q96R30 315 aa14.62□□□□□ -0.07
PRKCB-202ENST00000321728 MAP1BP46821 2468 aaKnown RBP14.62□□□□□ -0.07
PRKCB-202ENST00000321728 SLC25A33Q9BSK2 321 aa14.62□□□□□ -0.07
PRKCB-202ENST00000321728 TMEM70Q9BUB7 260 aa14.62□□□□□ -0.07
PRKCB-202ENST00000321728 A0A1W2PN81 502 aa14.61□□□□□ -0.07
PRKCB-202ENST00000321728 KLF5Q13887 457 aaPredicted RBP14.61□□□□□ -0.07
PRKCB-202ENST00000321728 WASHC3Q9Y3C0 194 aa14.61□□□□□ -0.07
PRKCB-202ENST00000321728 AMMECR1Q9Y4X0 333 aaPredicted RBP14.61□□□□□ -0.07
PRKCB-202ENST00000321728 IGHV3OR15-7A0A075B7D8 119 aa14.61□□□□□ -0.07
PRKCB-202ENST00000321728 TRAV30A0A087WSZ9 112 aa14.61□□□□□ -0.07
PRKCB-202ENST00000321728 FNDC10F2Z333 226 aa14.61□□□□□ -0.07
PRKCB-202ENST00000321728 ALKBH2Q6NS38 261 aa14.61□□□□□ -0.07
PRKCB-202ENST00000321728 ZNRF1Q8ND25 227 aa14.61□□□□□ -0.07
PRKCB-202ENST00000321728 NUDT10Q8NFP7 164 aa14.61□□□□□ -0.07
PRKCB-202ENST00000321728 OR2T6Q8NHC8 308 aa14.61□□□□□ -0.07
PRKCB-202ENST00000321728 ZNF596Q8TC21 504 aa14.61□□□□□ -0.07
PRKCB-202ENST00000321728 NUDT11Q96G61 164 aa14.61□□□□□ -0.07
PRKCB-202ENST00000321728 GRAMD2BQ96HH9 432 aa14.61□□□□□ -0.07
PRKCB-202ENST00000321728 IGKV1D-17A0A075B6S4 117 aa14.6□□□□□ -0.07
PRKCB-202ENST00000321728 OR4C46A6NHA9 309 aa14.6□□□□□ -0.07
PRKCB-202ENST00000321728 SAA2P0DJI9 122 aaPredicted RBP14.6□□□□□ -0.07
PRKCB-202ENST00000321728 CADP27708 2225 aa14.6□□□□□ -0.07
PRKCB-202ENST00000321728 A0A1W2PNU3 283 aaPredicted RBP14.6□□□□□ -0.07
PRKCB-202ENST00000321728 SH2D7A6NKC9 451 aaPredicted RBP14.6□□□□□ -0.07
PRKCB-202ENST00000321728 HIGD1CA8MV81 97 aa14.6□□□□□ -0.07
PRKCB-202ENST00000321728 C9orf172C9J069 976 aa14.6□□□□□ -0.07
PRKCB-202ENST00000321728 CA7P43166 264 aa14.6□□□□□ -0.07
PRKCB-202ENST00000321728 MORN5Q5VZ52 161 aa14.6□□□□□ -0.07
PRKCB-202ENST00000321728 C19orf24Q9BVV8 132 aa14.6□□□□□ -0.07
PRKCB-202ENST00000321728 MGST3O14880 152 aa14.59□□□□□ -0.07
PRKCB-202ENST00000321728 LRRC10Q5BKY1 277 aa14.59□□□□□ -0.07
PRKCB-202ENST00000321728 INO80CQ6PI98 192 aaPredicted RBP14.59□□□□□ -0.07
PRKCB-202ENST00000321728 MBD6Q96DN6 1003 aa14.59□□□□□ -0.07
PRKCB-202ENST00000321728 VPS25Q9BRG1 176 aa14.59□□□□□ -0.07
PRKCB-202ENST00000321728 CALYQ9NYX4 217 aa14.59□□□□□ -0.07
PRKCB-202ENST00000321728 CBY3A6NI87 242 aa14.59□□□□□ -0.07
PRKCB-202ENST00000321728 CT45A1Q5HYN5 189 aa14.59□□□□□ -0.07
PRKCB-202ENST00000321728 CT45A3Q8NHU0 189 aa14.59□□□□□ -0.07
PRKCB-202ENST00000321728 PPP1R35Q8TAP8 253 aa14.59□□□□□ -0.07
PRKCB-202ENST00000321728 F2RL2O00254 374 aa14.59□□□□□ -0.07
PRKCB-202ENST00000321728 NUDT3O95989 172 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms