RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 RPS10P46783 165 aaKnown RBP6.1□□□□□ -1.43
IFT88-201ENST00000319980 PRR20EP86478 221 aa6.1□□□□□ -1.43
IFT88-201ENST00000319980 PRR20CP86479 221 aa6.1□□□□□ -1.43
IFT88-201ENST00000319980 PRR20DP86480 221 aa6.1□□□□□ -1.43
IFT88-201ENST00000319980 PRR20BP86481 221 aa6.1□□□□□ -1.43
IFT88-201ENST00000319980 PRR20AP86496 221 aa6.1□□□□□ -1.43
IFT88-201ENST00000319980 CD69Q07108 199 aa6.1□□□□□ -1.43
IFT88-201ENST00000319980 PNKDQ8N490 385 aa6.1□□□□□ -1.43
IFT88-201ENST00000319980 OR4P4Q8NGL7 312 aa6.1□□□□□ -1.43
IFT88-201ENST00000319980 OR2T6Q8NHC8 308 aa6.1□□□□□ -1.43
IFT88-201ENST00000319980 Q8WTZ3 238 aa6.1□□□□□ -1.43
IFT88-201ENST00000319980 NEU4Q8WWR8 484 aaPredicted RBP6.1□□□□□ -1.43
IFT88-201ENST00000319980 YPEL4Q96NS1 127 aa6.1□□□□□ -1.43
IFT88-201ENST00000319980 BIN3Q9NQY0 253 aa6.1□□□□□ -1.43
IFT88-201ENST00000319980 MED13LQ71F56 2210 aa6.1□□□□□ -1.43
IFT88-201ENST00000319980 CXorf65A6NEN9 183 aa6.1□□□□□ -1.43
IFT88-201ENST00000319980 NDUFS7O75251 213 aa6.1□□□□□ -1.43
IFT88-201ENST00000319980 FOXH1O75593 365 aa6.1□□□□□ -1.43
IFT88-201ENST00000319980 LINC00869P0C866 280 aa6.1□□□□□ -1.43
IFT88-201ENST00000319980 AGAP20933 346 aa6.1□□□□□ -1.43
IFT88-201ENST00000319980 NPPCP23582 126 aa6.1□□□□□ -1.43
IFT88-201ENST00000319980 AKR1D1P51857 326 aa6.1□□□□□ -1.43
IFT88-201ENST00000319980 RHOBP62745 196 aa6.1□□□□□ -1.43
IFT88-201ENST00000319980 TMEM249Q2WGJ8 235 aa6.1□□□□□ -1.43
IFT88-201ENST00000319980 CYP2G1PQ6ZSU1 146 aa6.1□□□□□ -1.43
IFT88-201ENST00000319980 BEND2Q8NDZ0 799 aa6.1□□□□□ -1.43
IFT88-201ENST00000319980 C8orf46Q8TAG6 207 aa6.1□□□□□ -1.43
IFT88-201ENST00000319980 SLC45A2Q9UMX9 530 aa6.1□□□□□ -1.43
IFT88-201ENST00000319980 PLXNB1O43157 2135 aa6.09□□□□□ -1.43
IFT88-201ENST00000319980 TGIF2-C20orf24A0A0A6YYL0 155 aa6.09□□□□□ -1.43
IFT88-201ENST00000319980 A0A1W2PPI3 338 aa6.09□□□□□ -1.43
IFT88-201ENST00000319980 CLDN34H7C241 214 aa6.09□□□□□ -1.43
IFT88-201ENST00000319980 S100A6P06703 90 aa6.09□□□□□ -1.43
IFT88-201ENST00000319980 CXCL1P09341 107 aa6.09□□□□□ -1.43
IFT88-201ENST00000319980 SNRPEP62304 92 aaKnown RBP6.09□□□□□ -1.43
IFT88-201ENST00000319980 TNXAQ16473 311 aa6.09□□□□□ -1.43
IFT88-201ENST00000319980 SSX3Q99909 188 aa6.09□□□□□ -1.43
IFT88-201ENST00000319980 CHODLQ9H9P2 273 aa6.09□□□□□ -1.43
IFT88-201ENST00000319980 PDE6DO43924 150 aa6.09□□□□□ -1.44
IFT88-201ENST00000319980 NDUFB4O95168 129 aa6.09□□□□□ -1.44
IFT88-201ENST00000319980 RBP4P02753 201 aa6.09□□□□□ -1.44
IFT88-201ENST00000319980 SUB1P53999 127 aaKnown RBP eCLIP6.09□□□□□ -1.44
IFT88-201ENST00000319980 RPL23P62829 140 aaKnown RBP6.09□□□□□ -1.44
IFT88-201ENST00000319980 GNB1P62873 340 aa6.09□□□□□ -1.44
IFT88-201ENST00000319980 MRGPRG-AS1Q2M3A8 158 aa6.09□□□□□ -1.44
IFT88-201ENST00000319980 HCP5Q6MZN7 132 aa6.09□□□□□ -1.44
IFT88-201ENST00000319980 MIR17HGQ75NE6 70 aa6.09□□□□□ -1.44
IFT88-201ENST00000319980 SLC16A13Q7RTY0 426 aa6.09□□□□□ -1.44
IFT88-201ENST00000319980 LY6G5BQ8NDX9 201 aa6.09□□□□□ -1.44
IFT88-201ENST00000319980 OR5T1Q8NG75 326 aa6.09□□□□□ -1.44
IFT88-201ENST00000319980 NANPQ8TBE9 248 aa6.09□□□□□ -1.44
IFT88-201ENST00000319980 CACNG8Q8WXS5 425 aa6.09□□□□□ -1.44
IFT88-201ENST00000319980 DERL1Q9BUN8 251 aa6.09□□□□□ -1.44
IFT88-201ENST00000319980 SSBP3Q9BWW4 388 aaPredicted RBP6.09□□□□□ -1.44
IFT88-201ENST00000319980 FNDC4Q9H6D8 234 aaPredicted RBP6.09□□□□□ -1.44
IFT88-201ENST00000319980 LOC105371242A0A075B767 164 aa6.08□□□□□ -1.44
IFT88-201ENST00000319980 INS-IGF2F8WCM5 200 aa6.08□□□□□ -1.44
IFT88-201ENST00000319980 GCHFRP30047 84 aa6.08□□□□□ -1.44
IFT88-201ENST00000319980 MAS1LP35410 378 aa6.08□□□□□ -1.44
IFT88-201ENST00000319980 RPL35P42766 123 aaKnown RBP6.08□□□□□ -1.44
IFT88-201ENST00000319980 PSG5Q15238 335 aa6.08□□□□□ -1.44
IFT88-201ENST00000319980 PRSS8Q16651 343 aa6.08□□□□□ -1.44
IFT88-201ENST00000319980 LDLRAD2Q5SZI1 272 aa6.08□□□□□ -1.44
IFT88-201ENST00000319980 DTX2Q86UW9 622 aa6.08□□□□□ -1.44
IFT88-201ENST00000319980 TEX45Q8NA69 505 aa6.08□□□□□ -1.44
IFT88-201ENST00000319980 ITLN2Q8WWU7 325 aaPredicted RBP6.08□□□□□ -1.44
IFT88-201ENST00000319980 SLC35E1Q96K37 410 aa6.08□□□□□ -1.44
IFT88-201ENST00000319980 UBTD1Q9HAC8 227 aa6.08□□□□□ -1.44
IFT88-201ENST00000319980 TMEM242Q9NWH2 141 aa6.08□□□□□ -1.44
IFT88-201ENST00000319980 AURKAIP1Q9NWT8 199 aaPredicted RBP6.08□□□□□ -1.44
IFT88-201ENST00000319980 METTL1Q9UBP6 276 aaKnown RBP6.08□□□□□ -1.44
IFT88-201ENST00000319980 SIGLEC9Q9Y336 463 aa6.08□□□□□ -1.44
IFT88-201ENST00000319980 HILPDAQ9Y5L2 63 aa6.08□□□□□ -1.44
IFT88-201ENST00000319980 ARHGAP32A7KAX9 2087 aa6.08□□□□□ -1.44
IFT88-201ENST00000319980 NAV3Q8IVL0 2385 aa6.08□□□□□ -1.44
IFT88-201ENST00000319980 A0A1W2PRD5 423 aa6.08□□□□□ -1.44
IFT88-201ENST00000319980 A0A1W2PRF3 423 aa6.08□□□□□ -1.44
IFT88-201ENST00000319980 A0A1W2PRM7 423 aa6.08□□□□□ -1.44
IFT88-201ENST00000319980 GPX4P36969 197 aaPredicted RBP6.08□□□□□ -1.44
IFT88-201ENST00000319980 SSBP2P81877 361 aaPredicted RBP6.08□□□□□ -1.44
IFT88-201ENST00000319980 C4orf17Q53FE4 359 aa6.08□□□□□ -1.44
IFT88-201ENST00000319980 PPP1R27Q86WC6 154 aa6.08□□□□□ -1.44
IFT88-201ENST00000319980 MMD2Q8IY49 270 aa6.08□□□□□ -1.44
IFT88-201ENST00000319980 RNASEH2CQ8TDP1 164 aaKnown RBP6.08□□□□□ -1.44
IFT88-201ENST00000319980 NPIPB3Q92617 1050 aa6.08□□□□□ -1.44
IFT88-201ENST00000319980 AMMECR1Q9Y4X0 333 aaPredicted RBP6.08□□□□□ -1.44
IFT88-201ENST00000319980 PGPEP1LA6NFU8 196 aa6.07□□□□□ -1.44
IFT88-201ENST00000319980 C19orf84I3L1E1 186 aa6.07□□□□□ -1.44
IFT88-201ENST00000319980 MT-CO2P00403 227 aa6.07□□□□□ -1.44
IFT88-201ENST00000319980 HTR1DP28221 377 aa6.07□□□□□ -1.44
IFT88-201ENST00000319980 RPL27AP46776 148 aaKnown RBP6.07□□□□□ -1.44
IFT88-201ENST00000319980 C19orf35Q6ZS72 473 aa6.07□□□□□ -1.44
IFT88-201ENST00000319980 IGFBPL1Q8WX77 278 aa6.07□□□□□ -1.44
IFT88-201ENST00000319980 MALSU1Q96EH3 234 aa6.07□□□□□ -1.44
IFT88-201ENST00000319980 FBXL15Q9H469 300 aa6.07□□□□□ -1.44
IFT88-201ENST00000319980 YTHDF2Q9Y5A9 579 aaKnown RBP6.07□□□□□ -1.44
IFT88-201ENST00000319980 ABCA1O95477 2261 aa6.07□□□□□ -1.44
IFT88-201ENST00000319980 IGLC7A0M8Q6 106 aa6.07□□□□□ -1.44
IFT88-201ENST00000319980 LY6LH3BQJ8 138 aa6.07□□□□□ -1.44
IFT88-201ENST00000319980 J3QKU1 62 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms