RNA–Protein interactions for RNA: ENST00000317968.8

PDLIM5-201, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDLIM5, Length 6,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-201ENST00000317968 MRPL20Q9BYC9 149 aaKnown RBP7.03□□□□□ -1.28
PDLIM5-201ENST00000317968 SAA2-SAA4A0A096LPE2 208 aa7.02□□□□□ -1.28
PDLIM5-201ENST00000317968 WISP2O76076 250 aa7.02□□□□□ -1.28
PDLIM5-201ENST00000317968 SAA2P0DJI9 122 aaPredicted RBP7.02□□□□□ -1.28
PDLIM5-201ENST00000317968 PAX1P15863 534 aa7.02□□□□□ -1.28
PDLIM5-201ENST00000317968 DYNLT3P51808 116 aa7.02□□□□□ -1.28
PDLIM5-201ENST00000317968 RNF212Q495C1 297 aa7.02□□□□□ -1.28
PDLIM5-201ENST00000317968 MRPL32Q9BYC8 188 aaKnown RBP7.02□□□□□ -1.28
PDLIM5-201ENST00000317968 RBKSQ9H477 322 aa7.02□□□□□ -1.28
PDLIM5-201ENST00000317968 OR5AC2Q9NZP5 309 aa7.02□□□□□ -1.28
PDLIM5-201ENST00000317968 UPK2O00526 184 aa7.02□□□□□ -1.29
PDLIM5-201ENST00000317968 MGPP08493 103 aa7.02□□□□□ -1.29
PDLIM5-201ENST00000317968 SPANXN1Q5VSR9 72 aa7.02□□□□□ -1.29
PDLIM5-201ENST00000317968 CLEC19AQ6UXS0 136 aa7.02□□□□□ -1.29
PDLIM5-201ENST00000317968 GBGT1Q8N5D6 347 aa7.02□□□□□ -1.29
PDLIM5-201ENST00000317968 RNASEH2CQ8TDP1 164 aaKnown RBP7.02□□□□□ -1.29
PDLIM5-201ENST00000317968 IGKV1-6A0A0C4DH72 117 aa7.02□□□□□ -1.29
PDLIM5-201ENST00000317968 C17orf98A8MV24 154 aa7.02□□□□□ -1.29
PDLIM5-201ENST00000317968 C15orf65H3BRN8 121 aa7.02□□□□□ -1.29
PDLIM5-201ENST00000317968 RRHO14718 337 aa7.02□□□□□ -1.29
PDLIM5-201ENST00000317968 P01737 135 aa7.02□□□□□ -1.29
PDLIM5-201ENST00000317968 ANOS1P23352 680 aa7.02□□□□□ -1.29
PDLIM5-201ENST00000317968 Q6ZN92 141 aa7.02□□□□□ -1.29
PDLIM5-201ENST00000317968 ZNF843Q8N446 348 aa7.02□□□□□ -1.29
PDLIM5-201ENST00000317968 KLHL30-AS1Q8NEE0 82 aa7.02□□□□□ -1.29
PDLIM5-201ENST00000317968 OR51G1Q8NGK1 321 aa7.02□□□□□ -1.29
PDLIM5-201ENST00000317968 SPTAN1Q13813 2472 aaKnown RBP7.02□□□□□ -1.29
PDLIM5-201ENST00000317968 EIF4E3Q8N5X7 224 aaKnown RBP7.02□□□□□ -1.29
PDLIM5-201ENST00000317968 OR11H4Q8NGC9 324 aa7.02□□□□□ -1.29
PDLIM5-201ENST00000317968 FBLL1A6NHQ2 334 aaKnown RBP7.02□□□□□ -1.29
PDLIM5-201ENST00000317968 EREGO14944 169 aa7.02□□□□□ -1.29
PDLIM5-201ENST00000317968 LINC00869P0C866 280 aa7.02□□□□□ -1.29
PDLIM5-201ENST00000317968 COL8A2P25067 703 aa7.02□□□□□ -1.29
PDLIM5-201ENST00000317968 AMTP48728 403 aa7.02□□□□□ -1.29
PDLIM5-201ENST00000317968 POU2AF1Q16633 256 aa7.02□□□□□ -1.29
PDLIM5-201ENST00000317968 HAGHQ16775 308 aa7.02□□□□□ -1.29
PDLIM5-201ENST00000317968 PRR13Q9NZ81 148 aa7.02□□□□□ -1.29
PDLIM5-201ENST00000317968 IGHV2-70P01814 119 aa7.01□□□□□ -1.29
PDLIM5-201ENST00000317968 SPSB3Q6PJ21 355 aa7.01□□□□□ -1.29
PDLIM5-201ENST00000317968 HS3ST6Q96QI5 342 aa7.01□□□□□ -1.29
PDLIM5-201ENST00000317968 LINC00574Q9H8X3 128 aa7.01□□□□□ -1.29
PDLIM5-201ENST00000317968 C15orf61A6NNL5 157 aa7.01□□□□□ -1.29
PDLIM5-201ENST00000317968 H7C1H1 209 aa7.01□□□□□ -1.29
PDLIM5-201ENST00000317968 CCL3L1P16619 93 aa7.01□□□□□ -1.29
PDLIM5-201ENST00000317968 C19orf54Q5BKX5 351 aa7.01□□□□□ -1.29
PDLIM5-201ENST00000317968 FAM159AQ6UWV7 190 aa7.01□□□□□ -1.29
PDLIM5-201ENST00000317968 EAF1Q96JC9 268 aaPredicted RBP7.01□□□□□ -1.29
PDLIM5-201ENST00000317968 GPX4P36969 197 aaPredicted RBP7.01□□□□□ -1.29
PDLIM5-201ENST00000317968 COX19Q49B96 90 aa7.01□□□□□ -1.29
PDLIM5-201ENST00000317968 TOR2AQ5JU69 321 aa7.01□□□□□ -1.29
PDLIM5-201ENST00000317968 DUX3Q96PT4 197 aa7.01□□□□□ -1.29
PDLIM5-201ENST00000317968 PXMP4Q9Y6I8 212 aa7.01□□□□□ -1.29
PDLIM5-201ENST00000317968 CTXND1A0A1B0GTU2 59 aa7.01□□□□□ -1.29
PDLIM5-201ENST00000317968 LOXP28300 417 aaPredicted RBP7.01□□□□□ -1.29
PDLIM5-201ENST00000317968 ZCCHC24Q8N2G6 241 aaKnown RBP7.01□□□□□ -1.29
PDLIM5-201ENST00000317968 IFI27L2Q9H2X8 130 aa7.01□□□□□ -1.29
PDLIM5-201ENST00000317968 TRAV14DV4A0A0A6YYC5 116 aa7.01□□□□□ -1.29
PDLIM5-201ENST00000317968 PLAUP00749 431 aa7.01□□□□□ -1.29
PDLIM5-201ENST00000317968 RPL39P5Q59GN2 51 aa7.01□□□□□ -1.29
PDLIM5-201ENST00000317968 TVP23CQ96ET8 276 aa7.01□□□□□ -1.29
PDLIM5-201ENST00000317968 LINC01587Q99440 93 aa7.01□□□□□ -1.29
PDLIM5-201ENST00000317968 ZNF705FA8MVS1 300 aaPredicted RBP7□□□□□ -1.29
PDLIM5-201ENST00000317968 FNDC10F2Z333 226 aa7□□□□□ -1.29
PDLIM5-201ENST00000317968 ZNF705DP0CH99 300 aaPredicted RBP7□□□□□ -1.29
PDLIM5-201ENST00000317968 ZNF705BP0CI00 300 aaPredicted RBP7□□□□□ -1.29
PDLIM5-201ENST00000317968 COL8A1P27658 744 aa7□□□□□ -1.29
PDLIM5-201ENST00000317968 GPR183P32249 361 aa7□□□□□ -1.29
PDLIM5-201ENST00000317968 CRIP3Q6Q6R5 217 aa7□□□□□ -1.29
PDLIM5-201ENST00000317968 PPP5D1E7EU14 171 aa7□□□□□ -1.29
PDLIM5-201ENST00000317968 SLC31A2O15432 143 aa7□□□□□ -1.29
PDLIM5-201ENST00000317968 PDE6DO43924 150 aa7□□□□□ -1.29
PDLIM5-201ENST00000317968 RELBQ01201 579 aa7□□□□□ -1.29
PDLIM5-201ENST00000317968 HIST1H1AQ02539 215 aaPredicted RBP7□□□□□ -1.29
PDLIM5-201ENST00000317968 ZNF600Q6ZNG1 722 aa7□□□□□ -1.29
PDLIM5-201ENST00000317968 C19orf35Q6ZS72 473 aa7□□□□□ -1.29
PDLIM5-201ENST00000317968 NEUROG1Q92886 237 aa7□□□□□ -1.29
PDLIM5-201ENST00000317968 PVRIGQ6DKI7 326 aa7□□□□□ -1.29
PDLIM5-201ENST00000317968 Q71RC1 249 aaPredicted RBP7□□□□□ -1.29
PDLIM5-201ENST00000317968 PRDM13Q9H4Q3 707 aa7□□□□□ -1.29
PDLIM5-201ENST00000317968 TRBV7-1A0A0A6YYK4 115 aa7□□□□□ -1.29
PDLIM5-201ENST00000317968 RNF222A6NCQ9 220 aa7□□□□□ -1.29
PDLIM5-201ENST00000317968 IGHV3-11P01762 117 aa7□□□□□ -1.29
PDLIM5-201ENST00000317968 ATP6V0CP27449 155 aa7□□□□□ -1.29
PDLIM5-201ENST00000317968 PRCDQ00LT1 54 aa7□□□□□ -1.29
PDLIM5-201ENST00000317968 RNF126Q9BV68 326 aa7□□□□□ -1.29
PDLIM5-201ENST00000317968 PARD6GQ9BYG4 376 aaPredicted RBP7□□□□□ -1.29
PDLIM5-201ENST00000317968 IL4P05112 153 aa7□□□□□ -1.29
PDLIM5-201ENST00000317968 CRISP2P16562 243 aa7□□□□□ -1.29
PDLIM5-201ENST00000317968 RHOGP84095 191 aa7□□□□□ -1.29
PDLIM5-201ENST00000317968 ANKRD11Q6UB99 2663 aaPredicted RBP6.99□□□□□ -1.29
PDLIM5-201ENST00000317968 IL6RP08887 468 aaPredicted RBP6.99□□□□□ -1.29
PDLIM5-201ENST00000317968 APOC4P55056 127 aa6.99□□□□□ -1.29
PDLIM5-201ENST00000317968 FAM53AQ6NSI3 398 aaPredicted RBP6.99□□□□□ -1.29
PDLIM5-201ENST00000317968 BRD3OSQ6XYD6 125 aa6.99□□□□□ -1.29
PDLIM5-201ENST00000317968 C11orf44Q8N8P7 122 aa6.99□□□□□ -1.29
PDLIM5-201ENST00000317968 TAF15Q92804 592 aaKnown RBP eCLIP6.99□□□□□ -1.29
PDLIM5-201ENST00000317968 SLC50A1Q9BRV3 221 aa6.99□□□□□ -1.29
PDLIM5-201ENST00000317968 DNAJC4Q9NNZ3 241 aa6.99□□□□□ -1.29
PDLIM5-201ENST00000317968 TMEM189A5PLL7 270 aa6.99□□□□□ -1.29
PDLIM5-201ENST00000317968 M6PRP20645 277 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms