RNA–Protein interactions for RNA: ENST00000317620.13

PROM2-201, Transcript of prominin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PROM2, Length 4,728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM2-201ENST00000317620 TBR1Q16650 682 aa11.28□□□□□ -0.6
PROM2-201ENST00000317620 TRBV9A0A0B4J1U6 114 aa11.28□□□□□ -0.6
PROM2-201ENST00000317620 SLC17A3O00476 420 aa11.28□□□□□ -0.6
PROM2-201ENST00000317620 PLAURQ03405 335 aa11.28□□□□□ -0.6
PROM2-201ENST00000317620 FAM209BQ5JX69 171 aa11.28□□□□□ -0.6
PROM2-201ENST00000317620 FHL1Q13642 323 aa11.27□□□□□ -0.6
PROM2-201ENST00000317620 ATRAIDQ6UW56 229 aa11.27□□□□□ -0.6
PROM2-201ENST00000317620 PSMB2P49721 201 aa11.27□□□□□ -0.61
PROM2-201ENST00000317620 SUPT4H1P63272 117 aaKnown RBP11.27□□□□□ -0.61
PROM2-201ENST00000317620 SYT8Q8NBV8 401 aa11.27□□□□□ -0.61
PROM2-201ENST00000317620 DCAF16Q9NXF7 216 aa11.27□□□□□ -0.61
PROM2-201ENST00000317620 SLC25A15Q9Y619 301 aa11.27□□□□□ -0.61
PROM2-201ENST00000317620 PTPRDP23468 1912 aa11.27□□□□□ -0.61
PROM2-201ENST00000317620 NBR2O15453 112 aa11.27□□□□□ -0.61
PROM2-201ENST00000317620 LILRA1O75019 489 aa11.27□□□□□ -0.61
PROM2-201ENST00000317620 OTX1P32242 354 aaPredicted RBP11.27□□□□□ -0.61
PROM2-201ENST00000317620 STAG3L2P0CL84 134 aa11.27□□□□□ -0.61
PROM2-201ENST00000317620 CDX1P47902 265 aaPredicted RBP11.27□□□□□ -0.61
PROM2-201ENST00000317620 FOXA3P55318 350 aaPredicted RBP11.27□□□□□ -0.61
PROM2-201ENST00000317620 LRTM2Q8N967 370 aa11.27□□□□□ -0.61
PROM2-201ENST00000317620 A6NDN8 102 aa11.26□□□□□ -0.61
PROM2-201ENST00000317620 OR4C46A6NHA9 309 aa11.26□□□□□ -0.61
PROM2-201ENST00000317620 TCF24Q7RTU0 167 aa11.26□□□□□ -0.61
PROM2-201ENST00000317620 TEX45Q8NA69 505 aa11.26□□□□□ -0.61
PROM2-201ENST00000317620 DMRTA2Q96SC8 542 aa11.26□□□□□ -0.61
PROM2-201ENST00000317620 MAP1LC3AQ9H492 121 aa11.26□□□□□ -0.61
PROM2-201ENST00000317620 RPUSD1Q9UJJ7 312 aaKnown RBP11.26□□□□□ -0.61
PROM2-201ENST00000317620 PEX7O00628 323 aa11.26□□□□□ -0.61
PROM2-201ENST00000317620 OR9G9P0C7N8 305 aa11.26□□□□□ -0.61
PROM2-201ENST00000317620 C5orf24Q7Z6I8 188 aa11.26□□□□□ -0.61
PROM2-201ENST00000317620 OR4D5Q8NGN0 318 aa11.26□□□□□ -0.61
PROM2-201ENST00000317620 NAPSAO96009 420 aa11.26□□□□□ -0.61
PROM2-201ENST00000317620 THBDP07204 575 aa11.26□□□□□ -0.61
PROM2-201ENST00000317620 PMCHL1Q16048 86 aa11.26□□□□□ -0.61
PROM2-201ENST00000317620 TMEM42Q69YG0 159 aa11.26□□□□□ -0.61
PROM2-201ENST00000317620 SNRPD3P62318 126 aaKnown RBP11.26□□□□□ -0.61
PROM2-201ENST00000317620 CLEC19AQ6UXS0 136 aa11.26□□□□□ -0.61
PROM2-201ENST00000317620 A0A0G2JLM5 398 aa11.25□□□□□ -0.61
PROM2-201ENST00000317620 M0R3E3 92 aa11.25□□□□□ -0.61
PROM2-201ENST00000317620 RAX2Q96IS3 184 aa11.25□□□□□ -0.61
PROM2-201ENST00000317620 RSPO3Q9BXY4 272 aaPredicted RBP11.25□□□□□ -0.61
PROM2-201ENST00000317620 CACNA1AO00555 2505 aa11.25□□□□□ -0.61
PROM2-201ENST00000317620 RRN3P1Q2M238 152 aa11.25□□□□□ -0.61
PROM2-201ENST00000317620 GTF3C1Q12789 2109 aa11.25□□□□□ -0.61
PROM2-201ENST00000317620 IGHV3-11P01762 117 aa11.25□□□□□ -0.61
PROM2-201ENST00000317620 GCSHP23434 173 aa11.25□□□□□ -0.61
PROM2-201ENST00000317620 TSPOP30536 169 aa11.25□□□□□ -0.61
PROM2-201ENST00000317620 ZNF672Q499Z4 452 aaPredicted RBP11.25□□□□□ -0.61
PROM2-201ENST00000317620 FAM53AQ6NSI3 398 aaPredicted RBP11.25□□□□□ -0.61
PROM2-201ENST00000317620 Q6ZS92 163 aa11.25□□□□□ -0.61
PROM2-201ENST00000317620 COL25A1Q9BXS0 654 aaPredicted RBP11.25□□□□□ -0.61
PROM2-201ENST00000317620 C5orf52A6NGY3 159 aa11.24□□□□□ -0.61
PROM2-201ENST00000317620 NPIPB6E9PJ23 425 aa11.24□□□□□ -0.61
PROM2-201ENST00000317620 FAM74A4Q5TZK3 123 aa11.24□□□□□ -0.61
PROM2-201ENST00000317620 OR1N2Q8NGR9 330 aa11.24□□□□□ -0.61
PROM2-201ENST00000317620 DUX5Q96PT3 197 aa11.24□□□□□ -0.61
PROM2-201ENST00000317620 HBBP68871 147 aa11.24□□□□□ -0.61
PROM2-201ENST00000317620 RPL24P83731 157 aaKnown RBP11.24□□□□□ -0.61
PROM2-201ENST00000317620 KLK15Q9H2R5 256 aa11.24□□□□□ -0.61
PROM2-201ENST00000317620 SDF2L1Q9HCN8 221 aa11.24□□□□□ -0.61
PROM2-201ENST00000317620 METRNQ9UJH8 293 aa11.24□□□□□ -0.61
PROM2-201ENST00000317620 TIMM23O14925 209 aa11.24□□□□□ -0.61
PROM2-201ENST00000317620 NUDT3O95989 172 aa11.24□□□□□ -0.61
PROM2-201ENST00000317620 FAM159AQ6UWV7 190 aa11.24□□□□□ -0.61
PROM2-201ENST00000317620 C19orf67A6NJJ6 358 aa11.24□□□□□ -0.61
PROM2-201ENST00000317620 ZNF581Q9P0T4 197 aa11.24□□□□□ -0.61
PROM2-201ENST00000317620 IGHG3P01860 377 aa11.23□□□□□ -0.61
PROM2-201ENST00000317620 RPLP1P05386 114 aaKnown RBP11.23□□□□□ -0.61
PROM2-201ENST00000317620 ZNF25P17030 456 aaPredicted RBP11.23□□□□□ -0.61
PROM2-201ENST00000317620 ATG101Q9BSB4 218 aa11.23□□□□□ -0.61
PROM2-201ENST00000317620 WFDC1Q9HC57 220 aa11.23□□□□□ -0.61
PROM2-201ENST00000317620 MBD3L4A6NDZ8 208 aaPredicted RBP11.23□□□□□ -0.61
PROM2-201ENST00000317620 MBD3L3A6NE82 208 aaPredicted RBP11.23□□□□□ -0.61
PROM2-201ENST00000317620 MBD3L5A6NJ08 208 aaPredicted RBP11.23□□□□□ -0.61
PROM2-201ENST00000317620 SRSF3P84103 164 aaKnown RBP11.23□□□□□ -0.61
PROM2-201ENST00000317620 PRCDQ00LT1 54 aa11.23□□□□□ -0.61
PROM2-201ENST00000317620 HGFACQ04756 655 aa11.23□□□□□ -0.61
PROM2-201ENST00000317620 CD69Q07108 199 aa11.23□□□□□ -0.61
PROM2-201ENST00000317620 SRSF7Q16629 238 aaKnown RBP eCLIP11.23□□□□□ -0.61
PROM2-201ENST00000317620 MBD3L2Q8NHZ7 208 aaPredicted RBP11.23□□□□□ -0.61
PROM2-201ENST00000317620 WDR83OSQ9Y284 106 aa11.23□□□□□ -0.61
PROM2-201ENST00000317620 HLA-DRB1P01911 266 aa11.23□□□□□ -0.61
PROM2-201ENST00000317620 QRFPP83859 136 aa11.23□□□□□ -0.61
PROM2-201ENST00000317620 SMAGPQ0VAQ4 97 aa11.23□□□□□ -0.61
PROM2-201ENST00000317620 CD177Q8N6Q3 437 aa11.23□□□□□ -0.61
PROM2-201ENST00000317620 OR10AG1Q8NH19 301 aa11.23□□□□□ -0.61
PROM2-201ENST00000317620 GPR82Q96P67 336 aa11.23□□□□□ -0.61
PROM2-201ENST00000317620 IL36BQ9NZH7 164 aa11.23□□□□□ -0.61
PROM2-201ENST00000317620 HEPN1Q6WQI6 88 aa11.23□□□□□ -0.61
PROM2-201ENST00000317620 MUC21A0A0G2JKD1 596 aa11.22□□□□□ -0.61
PROM2-201ENST00000317620 A0A0G2JNJ9 132 aa11.22□□□□□ -0.61
PROM2-201ENST00000317620 MUC21A0A140T8X8 626 aa11.22□□□□□ -0.61
PROM2-201ENST00000317620 FOLR2P14207 255 aa11.22□□□□□ -0.61
PROM2-201ENST00000317620 CCL20P78556 96 aa11.22□□□□□ -0.61
PROM2-201ENST00000317620 SPATA45Q537H7 98 aa11.22□□□□□ -0.61
PROM2-201ENST00000317620 MUC21Q5SSG8 566 aa11.22□□□□□ -0.61
PROM2-201ENST00000317620 C10orf55Q5SWW7 151 aa11.22□□□□□ -0.61
PROM2-201ENST00000317620 COL5A1-AS1Q5SY13 56 aa11.22□□□□□ -0.61
PROM2-201ENST00000317620 ELOVL1Q9BW60 279 aa11.22□□□□□ -0.61
PROM2-201ENST00000317620 Q9UFV3 132 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms