RNA–Protein interactions for RNA: ENST00000317243.9

ZNF554-201, Transcript of zinc finger protein 554, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF554, Length 2,736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF554-201ENST00000317243 TET2Q6N021 2002 aaPredicted RBP15.92■□□□□ 0.14
ZNF554-201ENST00000317243 CEACAM4O75871 244 aa15.92■□□□□ 0.14
ZNF554-201ENST00000317243 STUMQ69YW2 141 aa15.92■□□□□ 0.14
ZNF554-201ENST00000317243 TMEM136Q6ZRR5 245 aa15.92■□□□□ 0.14
ZNF554-201ENST00000317243 ZCCHC24Q8N2G6 241 aaKnown RBP15.92■□□□□ 0.14
ZNF554-201ENST00000317243 RBMXL3Q8N7X1 1067 aaKnown RBP15.92■□□□□ 0.14
ZNF554-201ENST00000317243 TSKUQ8WUA8 353 aa15.92■□□□□ 0.14
ZNF554-201ENST00000317243 BORCS7Q96B45 105 aa15.92■□□□□ 0.14
ZNF554-201ENST00000317243 EAF1Q96JC9 268 aaPredicted RBP15.92■□□□□ 0.14
ZNF554-201ENST00000317243 SPTA1P02549 2419 aa15.92■□□□□ 0.14
ZNF554-201ENST00000317243 IGHV2-26A0A0B4J1V2 119 aa15.92■□□□□ 0.14
ZNF554-201ENST00000317243 ZNF891A8MT65 544 aaPredicted RBP15.92■□□□□ 0.14
ZNF554-201ENST00000317243 STAG3L2P0CL84 134 aa15.92■□□□□ 0.14
ZNF554-201ENST00000317243 STAG3L3P0CL85 134 aa15.92■□□□□ 0.14
ZNF554-201ENST00000317243 TMEM249Q2WGJ8 235 aa15.92■□□□□ 0.14
ZNF554-201ENST00000317243 OR10J3Q5JRS4 329 aa15.92■□□□□ 0.14
ZNF554-201ENST00000317243 LDLRAD2Q5SZI1 272 aa15.92■□□□□ 0.14
ZNF554-201ENST00000317243 C1orf162Q8NEQ5 155 aaPredicted RBP15.92■□□□□ 0.14
ZNF554-201ENST00000317243 DEFB108BQ8NET1 73 aa15.92■□□□□ 0.14
ZNF554-201ENST00000317243 MGST2Q99735 147 aa15.92■□□□□ 0.14
ZNF554-201ENST00000317243 IGF2RP11717 2491 aa15.92■□□□□ 0.14
ZNF554-201ENST00000317243 ZNF134P52741 427 aa15.91■□□□□ 0.14
ZNF554-201ENST00000317243 RPL39P5Q59GN2 51 aa15.91■□□□□ 0.14
ZNF554-201ENST00000317243 MRPL54Q6P161 138 aaKnown RBP15.91■□□□□ 0.14
ZNF554-201ENST00000317243 OR2D3Q8NGH3 330 aa15.91■□□□□ 0.14
ZNF554-201ENST00000317243 OR4A16Q8NH70 328 aa15.91■□□□□ 0.14
ZNF554-201ENST00000317243 SNRNP40Q96DI7 357 aaKnown RBP15.91■□□□□ 0.14
ZNF554-201ENST00000317243 RNASE7Q9H1E1 156 aaKnown RBP15.91■□□□□ 0.14
ZNF554-201ENST00000317243 CHODLQ9H9P2 273 aa15.91■□□□□ 0.14
ZNF554-201ENST00000317243 SAA2-SAA4A0A096LPE2 208 aa15.91■□□□□ 0.14
ZNF554-201ENST00000317243 TRBV9A0A0B4J1U6 114 aa15.91■□□□□ 0.14
ZNF554-201ENST00000317243 MBD3L4A6NDZ8 208 aaPredicted RBP15.91■□□□□ 0.14
ZNF554-201ENST00000317243 MBD3L3A6NE82 208 aaPredicted RBP15.91■□□□□ 0.14
ZNF554-201ENST00000317243 MBD3L5A6NJ08 208 aaPredicted RBP15.91■□□□□ 0.14
ZNF554-201ENST00000317243 BMPR1BO00238 502 aa15.91■□□□□ 0.14
ZNF554-201ENST00000317243 CXorf1O96002 111 aa15.91■□□□□ 0.14
ZNF554-201ENST00000317243 SMIM21Q3B7S5 101 aa15.91■□□□□ 0.14
ZNF554-201ENST00000317243 SPATA31B1PQ5VZV4 182 aa15.91■□□□□ 0.14
ZNF554-201ENST00000317243 DOLPP1Q86YN1 238 aa15.91■□□□□ 0.14
ZNF554-201ENST00000317243 MBD3L2Q8NHZ7 208 aaPredicted RBP15.91■□□□□ 0.14
ZNF554-201ENST00000317243 C15orf65H3BRN8 121 aa15.9■□□□□ 0.14
ZNF554-201ENST00000317243 RELBQ01201 579 aa15.9■□□□□ 0.14
ZNF554-201ENST00000317243 ITLN1Q8WWA0 313 aa15.9■□□□□ 0.14
ZNF554-201ENST00000317243 TNCP24821 2201 aa15.9■□□□□ 0.14
ZNF554-201ENST00000317243 TRAV3A0A0B4J244 114 aa15.9■□□□□ 0.14
ZNF554-201ENST00000317243 A0A1W2PN81 502 aa15.9■□□□□ 0.14
ZNF554-201ENST00000317243 IGLC7A0M8Q6 106 aa15.9■□□□□ 0.14
ZNF554-201ENST00000317243 Q56UQ5 140 aa15.9■□□□□ 0.14
ZNF554-201ENST00000317243 MBNL2Q5VZF2 373 aaKnown RBP15.9■□□□□ 0.14
ZNF554-201ENST00000317243 OR4F17Q8NGA8 305 aa15.9■□□□□ 0.14
ZNF554-201ENST00000317243 GGTLC1Q9BX51 225 aa15.9■□□□□ 0.14
ZNF554-201ENST00000317243 SEPSECSQ9HD40 501 aaKnown RBP15.9■□□□□ 0.14
ZNF554-201ENST00000317243 RAI1Q7Z5J4 1906 aaPredicted RBP15.9■□□□□ 0.14
ZNF554-201ENST00000317243 IGHV1-69-2A0A0G2JMI3 117 aa15.89■□□□□ 0.13
ZNF554-201ENST00000317243 FOXH1O75593 365 aa15.89■□□□□ 0.13
ZNF554-201ENST00000317243 GPR12P47775 334 aa15.89■□□□□ 0.13
ZNF554-201ENST00000317243 HSD17B10Q99714 261 aaKnown RBP15.89■□□□□ 0.13
ZNF554-201ENST00000317243 TXNDC17Q9BRA2 123 aa15.89■□□□□ 0.13
ZNF554-201ENST00000317243 TPRP12270 2363 aaKnown RBP15.89■□□□□ 0.13
ZNF554-201ENST00000317243 PPBPP02775 128 aa15.89■□□□□ 0.13
ZNF554-201ENST00000317243 CX3CL1P78423 397 aa15.89■□□□□ 0.13
ZNF554-201ENST00000317243 ZNRD1Q9P1U0 126 aa15.89■□□□□ 0.13
ZNF554-201ENST00000317243 ATRXP46100 2492 aa15.89■□□□□ 0.13
ZNF554-201ENST00000317243 LOC102724200A0A096LPH7 203 aaPredicted RBP15.88■□□□□ 0.13
ZNF554-201ENST00000317243 IGLL1P15814 213 aa15.88■□□□□ 0.13
ZNF554-201ENST00000317243 OPRK1P41145 380 aa15.88■□□□□ 0.13
ZNF554-201ENST00000317243 ST6GALNAC6Q969X2 333 aa15.88■□□□□ 0.13
ZNF554-201ENST00000317243 GNG12Q9UBI6 72 aa15.88■□□□□ 0.13
ZNF554-201ENST00000317243 GCHFRP30047 84 aa15.88■□□□□ 0.13
ZNF554-201ENST00000317243 Q8TCH9 128 aa15.88■□□□□ 0.13
ZNF554-201ENST00000317243 M0R1X1 148 aa15.88■□□□□ 0.13
ZNF554-201ENST00000317243 MT-ND6P03923 174 aa15.88■□□□□ 0.13
ZNF554-201ENST00000317243 WDR73Q6P4I2 378 aa15.88■□□□□ 0.13
ZNF554-201ENST00000317243 ZNF439Q8NDP4 499 aa15.88■□□□□ 0.13
ZNF554-201ENST00000317243 TRAV30A0A087WSZ9 112 aa15.87■□□□□ 0.13
ZNF554-201ENST00000317243 ACTL6BO94805 426 aa15.87■□□□□ 0.13
ZNF554-201ENST00000317243 ASPHD1Q5U4P2 390 aa15.87■□□□□ 0.13
ZNF554-201ENST00000317243 C19orf35Q6ZS72 473 aa15.87■□□□□ 0.13
ZNF554-201ENST00000317243 SMIM15Q7Z3B0 74 aa15.87■□□□□ 0.13
ZNF554-201ENST00000317243 CST9LQ9H4G1 147 aa15.87■□□□□ 0.13
ZNF554-201ENST00000317243 CDC42EP3Q9UKI2 254 aa15.87■□□□□ 0.13
ZNF554-201ENST00000317243 DSCAML1Q8TD84 2053 aa15.87■□□□□ 0.13
ZNF554-201ENST00000317243 SRRM5B3KS81 715 aa15.87■□□□□ 0.13
ZNF554-201ENST00000317243 PSG1P11464 419 aa15.87■□□□□ 0.13
ZNF554-201ENST00000317243 DUTP33316 252 aaKnown RBP15.87■□□□□ 0.13
ZNF554-201ENST00000317243 CENPWQ5EE01 88 aa15.87■□□□□ 0.13
ZNF554-201ENST00000317243 PQLC2Q6ZP29 291 aa15.87■□□□□ 0.13
ZNF554-201ENST00000317243 PRR7Q8TB68 274 aa15.87■□□□□ 0.13
ZNF554-201ENST00000317243 FAM122AQ96E09 287 aa15.87■□□□□ 0.13
ZNF554-201ENST00000317243 OCIAD2Q56VL3 154 aa15.86■□□□□ 0.13
ZNF554-201ENST00000317243 Q6ZS92 163 aa15.86■□□□□ 0.13
ZNF554-201ENST00000317243 MUC15Q8N387 334 aa15.86■□□□□ 0.13
ZNF554-201ENST00000317243 OR5B3Q8NH48 314 aa15.86■□□□□ 0.13
ZNF554-201ENST00000317243 TRAV9-2A0A087WT02 112 aa15.86■□□□□ 0.13
ZNF554-201ENST00000317243 SPINT2O43291 252 aa15.86■□□□□ 0.13
ZNF554-201ENST00000317243 MPDU1O75352 247 aa15.86■□□□□ 0.13
ZNF554-201ENST00000317243 GNG4P50150 75 aa15.86■□□□□ 0.13
ZNF554-201ENST00000317243 OR4P4Q8NGL7 312 aa15.86■□□□□ 0.13
ZNF554-201ENST00000317243 TRGV10A0A0A0MS01 117 aa15.85■□□□□ 0.13
ZNF554-201ENST00000317243 C9JCJ5 164 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms