RNA–Protein interactions for RNA: ENST00000317173.8

MSRA-201, Transcript of methionine sulfoxide reductase A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRA, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRA-201ENST00000317173 ZNF580Q9UK33 172 aa11.11□□□□□ -0.63
MSRA-201ENST00000317173 F11RQ9Y624 299 aaKnown RBP11.11□□□□□ -0.63
MSRA-201ENST00000317173 PRSS46E5RG02 174 aa11.1□□□□□ -0.63
MSRA-201ENST00000317173 AREGP15514 252 aa11.1□□□□□ -0.63
MSRA-201ENST00000317173 UBA52P62987 128 aaKnown RBP11.1□□□□□ -0.63
MSRA-201ENST00000317173 DLK1P80370 383 aa11.1□□□□□ -0.63
MSRA-201ENST00000317173 ARL16Q0P5N6 197 aa11.1□□□□□ -0.63
MSRA-201ENST00000317173 AKIRIN2Q53H80 203 aa11.1□□□□□ -0.63
MSRA-201ENST00000317173 OR8G2PQ6IF36 304 aa11.1□□□□□ -0.63
MSRA-201ENST00000317173 TTC9CQ8N5M4 171 aa11.1□□□□□ -0.63
MSRA-201ENST00000317173 UBAC2Q8NBM4 344 aa11.1□□□□□ -0.63
MSRA-201ENST00000317173 ZNF471Q9BX82 626 aaPredicted RBP11.1□□□□□ -0.63
MSRA-201ENST00000317173 SMIM3Q9BZL3 60 aa11.1□□□□□ -0.63
MSRA-201ENST00000317173 SLA2Q9H6Q3 261 aa11.1□□□□□ -0.63
MSRA-201ENST00000317173 CYTL1Q9NRR1 136 aa11.1□□□□□ -0.63
MSRA-201ENST00000317173 CLDN34H7C241 214 aa11.09□□□□□ -0.63
MSRA-201ENST00000317173 ATP6V0E1O15342 81 aa11.09□□□□□ -0.63
MSRA-201ENST00000317173 IGF1P05019 195 aa11.09□□□□□ -0.63
MSRA-201ENST00000317173 EGR2P11161 476 aaPredicted RBP11.09□□□□□ -0.63
MSRA-201ENST00000317173 TPT1P13693 172 aaKnown RBP11.09□□□□□ -0.63
MSRA-201ENST00000317173 VWC2Q2TAL6 325 aa11.09□□□□□ -0.63
MSRA-201ENST00000317173 SLC35E3Q7Z769 313 aa11.09□□□□□ -0.63
MSRA-201ENST00000317173 CACNG8Q8WXS5 425 aa11.09□□□□□ -0.63
MSRA-201ENST00000317173 BSCL2Q96G97 398 aaPredicted RBP11.09□□□□□ -0.63
MSRA-201ENST00000317173 FAM103A1Q9BTL3 118 aaKnown RBP11.09□□□□□ -0.63
MSRA-201ENST00000317173 TMEM147Q9BVK8 224 aa11.09□□□□□ -0.63
MSRA-201ENST00000317173 PARD6GQ9BYG4 376 aaPredicted RBP11.09□□□□□ -0.63
MSRA-201ENST00000317173 NPFFR1Q9GZQ6 430 aa11.09□□□□□ -0.63
MSRA-201ENST00000317173 PARP11Q9NR21 331 aa11.09□□□□□ -0.63
MSRA-201ENST00000317173 FBXO24O75426 580 aa11.09□□□□□ -0.63
MSRA-201ENST00000317173 GPX4P36969 197 aaPredicted RBP11.09□□□□□ -0.63
MSRA-201ENST00000317173 EXOSC2Q13868 293 aaKnown RBP11.09□□□□□ -0.63
MSRA-201ENST00000317173 CLINT1Q14677 625 aa11.09□□□□□ -0.63
MSRA-201ENST00000317173 ASPHD1Q5U4P2 390 aa11.09□□□□□ -0.63
MSRA-201ENST00000317173 LFNGQ8NES3 379 aa11.09□□□□□ -0.63
MSRA-201ENST00000317173 UQCC1Q9NVA1 299 aa11.09□□□□□ -0.63
MSRA-201ENST00000317173 FBXO7Q9Y3I1 522 aa11.09□□□□□ -0.63
MSRA-201ENST00000317173 RPS10-NUDT3A0A1W2PQS6 291 aa11.08□□□□□ -0.64
MSRA-201ENST00000317173 AP4M1O00189 453 aa11.08□□□□□ -0.64
MSRA-201ENST00000317173 IFNA5P01569 189 aa11.08□□□□□ -0.64
MSRA-201ENST00000317173 REG1AP05451 166 aa11.08□□□□□ -0.64
MSRA-201ENST00000317173 RPL15P61313 204 aaKnown RBP11.08□□□□□ -0.64
MSRA-201ENST00000317173 CD69Q07108 199 aa11.08□□□□□ -0.64
MSRA-201ENST00000317173 KLK9Q2XQG4 91 aa11.08□□□□□ -0.64
MSRA-201ENST00000317173 RPL7L1Q6DKI1 246 aaKnown RBP11.08□□□□□ -0.64
MSRA-201ENST00000317173 ETFRF1Q6IPR1 90 aa11.08□□□□□ -0.64
MSRA-201ENST00000317173 BAP18Q8IXM2 172 aa11.08□□□□□ -0.64
MSRA-201ENST00000317173 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.08□□□□□ -0.64
MSRA-201ENST00000317173 FAM110DQ8TAY7 271 aaPredicted RBP11.08□□□□□ -0.64
MSRA-201ENST00000317173 ST8SIA2Q92186 375 aa11.08□□□□□ -0.64
MSRA-201ENST00000317173 PHYHIPLQ96FC7 376 aa11.08□□□□□ -0.64
MSRA-201ENST00000317173 PRSS22Q9GZN4 317 aa11.08□□□□□ -0.64
MSRA-201ENST00000317173 WNT10AQ9GZT5 417 aa11.08□□□□□ -0.64
MSRA-201ENST00000317173 ARV1Q9H2C2 271 aa11.08□□□□□ -0.64
MSRA-201ENST00000317173 WFDC1Q9HC57 220 aa11.08□□□□□ -0.64
MSRA-201ENST00000317173 KLK9Q9UKQ9 250 aa11.08□□□□□ -0.64
MSRA-201ENST00000317173 APELAP0DMC3 54 aa11.07□□□□□ -0.64
MSRA-201ENST00000317173 DEFA4P12838 97 aa11.07□□□□□ -0.64
MSRA-201ENST00000317173 HIST1H1BP16401 226 aaKnown RBP11.07□□□□□ -0.64
MSRA-201ENST00000317173 BLCAPP62952 87 aa11.07□□□□□ -0.64
MSRA-201ENST00000317173 C9orf152Q5JTZ5 239 aa11.07□□□□□ -0.64
MSRA-201ENST00000317173 EIF5AL1Q6IS14 154 aaKnown RBP11.07□□□□□ -0.64
MSRA-201ENST00000317173 UNQ5815/PRO19632Q6UWF5 114 aa11.07□□□□□ -0.64
MSRA-201ENST00000317173 THYN1Q9P016 225 aa11.07□□□□□ -0.64
MSRA-201ENST00000317173 TRAV41A0A0B4J266 112 aa11.06□□□□□ -0.64
MSRA-201ENST00000317173 DNAJC9-AS1A6NH13 148 aa11.06□□□□□ -0.64
MSRA-201ENST00000317173 SH2D7A6NKC9 451 aaPredicted RBP11.06□□□□□ -0.64
MSRA-201ENST00000317173 BRI3O95415 125 aa11.06□□□□□ -0.64
MSRA-201ENST00000317173 ECSCRQ19T08 205 aa11.06□□□□□ -0.64
MSRA-201ENST00000317173 C19orf54Q5BKX5 351 aa11.06□□□□□ -0.64
MSRA-201ENST00000317173 SLC25A24Q6NUK1 477 aa11.06□□□□□ -0.64
MSRA-201ENST00000317173 TEX261Q6UWH6 196 aa11.06□□□□□ -0.64
MSRA-201ENST00000317173 SCGB1C1Q8TD33 95 aa11.06□□□□□ -0.64
MSRA-201ENST00000317173 GINS3Q9BRX5 216 aa11.06□□□□□ -0.64
MSRA-201ENST00000317173 NPVFQ9HCQ7 196 aa11.06□□□□□ -0.64
MSRA-201ENST00000317173 TNFRSF19Q9NS68 423 aa11.06□□□□□ -0.64
MSRA-201ENST00000317173 IGLV11-55A0A075B6I3 123 aa11.05□□□□□ -0.64
MSRA-201ENST00000317173 MPDU1O75352 247 aa11.05□□□□□ -0.64
MSRA-201ENST00000317173 IFNA7P01567 189 aa11.05□□□□□ -0.64
MSRA-201ENST00000317173 OPRK1P41145 380 aa11.05□□□□□ -0.64
MSRA-201ENST00000317173 MFAP2P55001 183 aa11.05□□□□□ -0.64
MSRA-201ENST00000317173 SLC16A13Q7RTY0 426 aa11.05□□□□□ -0.64
MSRA-201ENST00000317173 GNPNAT1Q96EK6 184 aaPredicted RBP11.05□□□□□ -0.64
MSRA-201ENST00000317173 SLC35E1Q96K37 410 aa11.05□□□□□ -0.64
MSRA-201ENST00000317173 WDR61Q9GZS3 305 aaKnown RBP11.05□□□□□ -0.64
MSRA-201ENST00000317173 ESM1Q9NQ30 184 aa11.05□□□□□ -0.64
MSRA-201ENST00000317173 WDR83OSQ9Y284 106 aa11.05□□□□□ -0.64
MSRA-201ENST00000317173 UBE2L5PA0A1B0GUS4 154 aa11.04□□□□□ -0.64
MSRA-201ENST00000317173 LINC01548A6NM66 108 aa11.04□□□□□ -0.64
MSRA-201ENST00000317173 H3BUA1 57 aa11.04□□□□□ -0.64
MSRA-201ENST00000317173 MDKP21741 143 aaPredicted RBP11.04□□□□□ -0.64
MSRA-201ENST00000317173 IFITM2Q01629 132 aa11.04□□□□□ -0.64
MSRA-201ENST00000317173 ARSJQ5FYB0 599 aaPredicted RBP11.04□□□□□ -0.64
MSRA-201ENST00000317173 ZNF767PQ75MW2 155 aa11.04□□□□□ -0.64
MSRA-201ENST00000317173 Q8N2B8 174 aa11.04□□□□□ -0.64
MSRA-201ENST00000317173 MISP3Q96FF7 219 aa11.04□□□□□ -0.64
MSRA-201ENST00000317173 RGS13O14921 159 aa11.04□□□□□ -0.64
MSRA-201ENST00000317173 SOX15O60248 233 aa11.04□□□□□ -0.64
MSRA-201ENST00000317173 RNASE1P07998 156 aaKnown RBP11.04□□□□□ -0.64
MSRA-201ENST00000317173 SEC11BP0C7V7 166 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms