RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 IFNA17P01571 189 aa6.2□□□□□ -1.42
CNOT4-201ENST00000315544 KRTAP1-1Q07627 177 aa6.2□□□□□ -1.42
CNOT4-201ENST00000315544 ABCA11PQ4W5N1 156 aa6.2□□□□□ -1.42
CNOT4-201ENST00000315544 C9orf152Q5JTZ5 239 aa6.2□□□□□ -1.42
CNOT4-201ENST00000315544 KIR3DL3Q8N743 410 aa6.2□□□□□ -1.42
CNOT4-201ENST00000315544 OR8B3Q8NGG8 313 aa6.2□□□□□ -1.42
CNOT4-201ENST00000315544 OR4P4Q8NGL7 312 aa6.2□□□□□ -1.42
CNOT4-201ENST00000315544 OR8B2Q96RD0 313 aa6.2□□□□□ -1.42
CNOT4-201ENST00000315544 TMEM140Q9NV12 185 aa6.2□□□□□ -1.42
CNOT4-201ENST00000315544 MRPL27Q9P0M9 148 aaKnown RBP6.2□□□□□ -1.42
CNOT4-201ENST00000315544 FBXO9Q9UK97 447 aaPredicted RBP6.2□□□□□ -1.42
CNOT4-201ENST00000315544 TRGV5A0A0B4J1U4 118 aa6.2□□□□□ -1.42
CNOT4-201ENST00000315544 A0A1B0GV90 55 aa6.2□□□□□ -1.42
CNOT4-201ENST00000315544 PRSS47A8MTI9 375 aa6.2□□□□□ -1.42
CNOT4-201ENST00000315544 SIRPB1O00241 398 aa6.2□□□□□ -1.42
CNOT4-201ENST00000315544 IGLC2P0DOY2 106 aa6.2□□□□□ -1.42
CNOT4-201ENST00000315544 ARL4DP49703 201 aa6.2□□□□□ -1.42
CNOT4-201ENST00000315544 SLAQ13239 276 aa6.2□□□□□ -1.42
CNOT4-201ENST00000315544 TIMM23BQ5SRD1 257 aa6.2□□□□□ -1.42
CNOT4-201ENST00000315544 SSX8Q7RTT4 187 aa6.2□□□□□ -1.42
CNOT4-201ENST00000315544 TMEM167AQ8TBQ9 72 aa6.2□□□□□ -1.42
CNOT4-201ENST00000315544 GALMQ96C23 342 aa6.2□□□□□ -1.42
CNOT4-201ENST00000315544 OSTCQ9NRP0 149 aa6.2□□□□□ -1.42
CNOT4-201ENST00000315544 TCF19Q9Y242 345 aa6.2□□□□□ -1.42
CNOT4-201ENST00000315544 COL6A6A6NMZ7 2263 aa6.2□□□□□ -1.42
CNOT4-201ENST00000315544 CEP295Q9C0D2 2601 aa6.2□□□□□ -1.42
CNOT4-201ENST00000315544 I3L2K1 104 aa6.19□□□□□ -1.42
CNOT4-201ENST00000315544 HSPB6O14558 160 aa6.19□□□□□ -1.42
CNOT4-201ENST00000315544 MLANAQ16655 118 aa6.19□□□□□ -1.42
CNOT4-201ENST00000315544 C1orf87Q8N0U7 546 aa6.19□□□□□ -1.42
CNOT4-201ENST00000315544 F6UZH7 168 aa6.19□□□□□ -1.42
CNOT4-201ENST00000315544 AGFG2O95081 481 aa6.19□□□□□ -1.42
CNOT4-201ENST00000315544 MBP02144 154 aa6.19□□□□□ -1.42
CNOT4-201ENST00000315544 ATP5IP56385 69 aaPredicted RBP6.19□□□□□ -1.42
CNOT4-201ENST00000315544 HERV-K104P61576 105 aa6.19□□□□□ -1.42
CNOT4-201ENST00000315544 MRPL49Q13405 166 aaKnown RBP6.19□□□□□ -1.42
CNOT4-201ENST00000315544 MRPL21Q7Z2W9 205 aaKnown RBP6.19□□□□□ -1.42
CNOT4-201ENST00000315544 P4HA3Q7Z4N8 544 aa6.19□□□□□ -1.42
CNOT4-201ENST00000315544 VKORC1L1Q8N0U8 176 aa6.19□□□□□ -1.42
CNOT4-201ENST00000315544 TMEM106BQ9NUM4 274 aa6.19□□□□□ -1.42
CNOT4-201ENST00000315544 B4GALT7Q9UBV7 327 aa6.19□□□□□ -1.42
CNOT4-201ENST00000315544 IL19Q9UHD0 177 aa6.19□□□□□ -1.42
CNOT4-201ENST00000315544 RIF1Q5UIP0 2472 aaKnown RBP6.19□□□□□ -1.42
CNOT4-201ENST00000315544 EP300Q09472 2414 aaPredicted RBP6.19□□□□□ -1.42
CNOT4-201ENST00000315544 DEFB108AA8MXU0 73 aa6.19□□□□□ -1.42
CNOT4-201ENST00000315544 MGST3O14880 152 aa6.19□□□□□ -1.42
CNOT4-201ENST00000315544 GLRXP35754 106 aa6.19□□□□□ -1.42
CNOT4-201ENST00000315544 ERVFC1-1P60608 527 aa6.19□□□□□ -1.42
CNOT4-201ENST00000315544 KIR3DS1Q14943 382 aa6.19□□□□□ -1.42
CNOT4-201ENST00000315544 TBC1D28Q2M2D7 210 aa6.19□□□□□ -1.42
CNOT4-201ENST00000315544 EBLN2Q6P2I7 272 aa6.19□□□□□ -1.42
CNOT4-201ENST00000315544 NEIL1Q96FI4 390 aaPredicted RBP6.19□□□□□ -1.42
CNOT4-201ENST00000315544 CDC42EP3Q9UKI2 254 aa6.19□□□□□ -1.42
CNOT4-201ENST00000315544 A0A1W2PRE2 83 aa6.18□□□□□ -1.42
CNOT4-201ENST00000315544 PPP5D1E7EU14 171 aa6.18□□□□□ -1.42
CNOT4-201ENST00000315544 GALR1P47211 349 aa6.18□□□□□ -1.42
CNOT4-201ENST00000315544 REG1BP48304 166 aa6.18□□□□□ -1.42
CNOT4-201ENST00000315544 ZMAT4Q9H898 229 aa6.18□□□□□ -1.42
CNOT4-201ENST00000315544 SLC25A22Q9H936 323 aa6.18□□□□□ -1.42
CNOT4-201ENST00000315544 POLR1DQ9Y2S0 133 aa6.18□□□□□ -1.42
CNOT4-201ENST00000315544 DNHD1Q96M86 4753 aa6.18□□□□□ -1.42
CNOT4-201ENST00000315544 CA2P00918 260 aa6.18□□□□□ -1.42
CNOT4-201ENST00000315544 EBI3Q14213 229 aa6.18□□□□□ -1.42
CNOT4-201ENST00000315544 ADIPOQQ15848 244 aa6.18□□□□□ -1.42
CNOT4-201ENST00000315544 ZNF493Q6ZR52 646 aa6.18□□□□□ -1.42
CNOT4-201ENST00000315544 MIR17HGQ75NE6 70 aa6.18□□□□□ -1.42
CNOT4-201ENST00000315544 ZNRF1Q8ND25 227 aa6.18□□□□□ -1.42
CNOT4-201ENST00000315544 TCTEX1D2Q8WW35 142 aa6.18□□□□□ -1.42
CNOT4-201ENST00000315544 NABP2Q9BQ15 211 aa6.18□□□□□ -1.42
CNOT4-201ENST00000315544 CALYQ9NYX4 217 aa6.18□□□□□ -1.42
CNOT4-201ENST00000315544 CACNA1DQ01668 2161 aa6.18□□□□□ -1.42
CNOT4-201ENST00000315544 NDUFA3O95167 84 aa6.18□□□□□ -1.42
CNOT4-201ENST00000315544 KRBOX4Q5JUW0 171 aa6.18□□□□□ -1.42
CNOT4-201ENST00000315544 FFAR4Q5NUL3 377 aa6.18□□□□□ -1.42
CNOT4-201ENST00000315544 FIP1L1Q6UN15 594 aaKnown RBP6.18□□□□□ -1.42
CNOT4-201ENST00000315544 COMMD2Q86X83 199 aa6.18□□□□□ -1.42
CNOT4-201ENST00000315544 TPRX1Q8N7U7 411 aa6.18□□□□□ -1.42
CNOT4-201ENST00000315544 TNFRSF14Q92956 283 aa6.18□□□□□ -1.42
CNOT4-201ENST00000315544 SLC35E1Q96K37 410 aa6.18□□□□□ -1.42
CNOT4-201ENST00000315544 TPSG1Q9NRR2 321 aa6.18□□□□□ -1.42
CNOT4-201ENST00000315544 SLC39A9Q9NUM3 307 aa6.18□□□□□ -1.42
CNOT4-201ENST00000315544 LOC105371242A0A075B767 164 aa6.17□□□□□ -1.42
CNOT4-201ENST00000315544 WI2-2373I1.2A0A1W2PRP0 233 aa6.17□□□□□ -1.42
CNOT4-201ENST00000315544 C11orf94C9JXX5 98 aa6.17□□□□□ -1.42
CNOT4-201ENST00000315544 GRNP28799 593 aaKnown RBP6.17□□□□□ -1.42
CNOT4-201ENST00000315544 HOXC12P31275 282 aa6.17□□□□□ -1.42
CNOT4-201ENST00000315544 RAB11AP62491 216 aa6.17□□□□□ -1.42
CNOT4-201ENST00000315544 ZNF816Q0VGE8 651 aaPredicted RBP6.17□□□□□ -1.42
CNOT4-201ENST00000315544 TMEM155Q4W5P6 130 aa6.17□□□□□ -1.42
CNOT4-201ENST00000315544 CT83Q5H943 113 aa6.17□□□□□ -1.42
CNOT4-201ENST00000315544 NHLRC2Q8NBF2 726 aa6.17□□□□□ -1.42
CNOT4-201ENST00000315544 OR4A5Q8NH83 315 aa6.17□□□□□ -1.42
CNOT4-201ENST00000315544 CD300LFQ8TDQ1 290 aa6.17□□□□□ -1.42
CNOT4-201ENST00000315544 MRGPRDQ8TDS7 321 aa6.17□□□□□ -1.42
CNOT4-201ENST00000315544 FAM19A4Q96LR4 140 aa6.17□□□□□ -1.42
CNOT4-201ENST00000315544 GNB4Q9HAV0 340 aa6.17□□□□□ -1.42
CNOT4-201ENST00000315544 IGLV2-18A0A075B6J9 118 aa6.17□□□□□ -1.42
CNOT4-201ENST00000315544 TRBV9A0A0B4J1U6 114 aa6.17□□□□□ -1.42
CNOT4-201ENST00000315544 A0A1W2PPR1 153 aa6.17□□□□□ -1.42
CNOT4-201ENST00000315544 CNN1P51911 297 aaKnown RBP6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms