RNA–Protein interactions for RNA: ENST00000313863.10

MKS1-201, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5 BASIC

Gene MKS1, Length 2,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-201ENST00000313863 SPINK4O60575 86 aa11.31□□□□□ -0.6
MKS1-201ENST00000313863 FRMD6-AS1P0C7T7 363 aa11.31□□□□□ -0.6
MKS1-201ENST00000313863 GLRXP35754 106 aa11.31□□□□□ -0.6
MKS1-201ENST00000313863 ZNF83P51522 516 aa11.31□□□□□ -0.6
MKS1-201ENST00000313863 TCL1AP56279 114 aa11.31□□□□□ -0.6
MKS1-201ENST00000313863 UBE2L3P68036 154 aaKnown RBP11.31□□□□□ -0.6
MKS1-201ENST00000313863 ERHP84090 104 aaKnown RBP11.31□□□□□ -0.6
MKS1-201ENST00000313863 MRPL54Q6P161 138 aaKnown RBP11.31□□□□□ -0.6
MKS1-201ENST00000313863 OSR1Q8TAX0 266 aaPredicted RBP11.31□□□□□ -0.6
MKS1-201ENST00000313863 TXN2Q99757 166 aa11.31□□□□□ -0.6
MKS1-201ENST00000313863 ZFP30Q9Y2G7 519 aa11.31□□□□□ -0.6
MKS1-201ENST00000313863 URB1O60287 2271 aaKnown RBP11.3□□□□□ -0.6
MKS1-201ENST00000313863 DSCAMO60469 2012 aa11.3□□□□□ -0.6
MKS1-201ENST00000313863 C20orf202A1L168 122 aa11.3□□□□□ -0.6
MKS1-201ENST00000313863 A6NNC1 897 aa11.3□□□□□ -0.6
MKS1-201ENST00000313863 RNASE2P10153 161 aaKnown RBP11.3□□□□□ -0.6
MKS1-201ENST00000313863 SELENOVP59797 346 aa11.3□□□□□ -0.6
MKS1-201ENST00000313863 KIAA1644Q3SXP7 199 aa11.3□□□□□ -0.6
MKS1-201ENST00000313863 FAM162BQ5T6X4 162 aa11.3□□□□□ -0.6
MKS1-201ENST00000313863 DHRS13Q6UX07 377 aa11.3□□□□□ -0.6
MKS1-201ENST00000313863 SLC25A48Q6ZT89 311 aaKnown RBP11.3□□□□□ -0.6
MKS1-201ENST00000313863 ITLN1Q8WWA0 313 aa11.3□□□□□ -0.6
MKS1-201ENST00000313863 GRAMD2BQ96HH9 432 aa11.3□□□□□ -0.6
MKS1-201ENST00000313863 DNAJC4Q9NNZ3 241 aa11.3□□□□□ -0.6
MKS1-201ENST00000313863 DKK4Q9UBT3 224 aa11.3□□□□□ -0.6
MKS1-201ENST00000313863 INS-IGF2F8WCM5 200 aa11.29□□□□□ -0.6
MKS1-201ENST00000313863 APOA2P02652 100 aa11.29□□□□□ -0.6
MKS1-201ENST00000313863 HNRNPA3P51991 378 aaKnown RBP11.29□□□□□ -0.6
MKS1-201ENST00000313863 BPIFB3P59826 476 aa11.29□□□□□ -0.6
MKS1-201ENST00000313863 TSKUQ8WUA8 353 aa11.29□□□□□ -0.6
MKS1-201ENST00000313863 RPUSD1Q9UJJ7 312 aaKnown RBP11.29□□□□□ -0.6
MKS1-201ENST00000313863 FREM2Q5SZK8 3169 aa11.29□□□□□ -0.6
MKS1-201ENST00000313863 TECTAO75443 2155 aa11.29□□□□□ -0.6
MKS1-201ENST00000313863 IGKV1OR2-108A0A075B7D4 117 aa11.29□□□□□ -0.6
MKS1-201ENST00000313863 A0A1W2PN81 502 aa11.29□□□□□ -0.6
MKS1-201ENST00000313863 SPRY3O43610 288 aa11.29□□□□□ -0.6
MKS1-201ENST00000313863 C3orf79P0CE67 100 aa11.29□□□□□ -0.6
MKS1-201ENST00000313863 IGLC2P0DOY2 106 aa11.29□□□□□ -0.6
MKS1-201ENST00000313863 IGLC3P0DOY3 106 aa11.29□□□□□ -0.6
MKS1-201ENST00000313863 STUMQ69YW2 141 aa11.29□□□□□ -0.6
MKS1-201ENST00000313863 RCHY1Q96PM5 261 aa11.29□□□□□ -0.6
MKS1-201ENST00000313863 PRR14LQ5THK1 2151 aa11.29□□□□□ -0.6
MKS1-201ENST00000313863 COX7A2P2O60397 106 aa11.28□□□□□ -0.6
MKS1-201ENST00000313863 CT45A6P0DMU7 189 aa11.28□□□□□ -0.6
MKS1-201ENST00000313863 CT45A5P0DMU8 189 aa11.28□□□□□ -0.6
MKS1-201ENST00000313863 CT45A7P0DMV0 189 aa11.28□□□□□ -0.6
MKS1-201ENST00000313863 MYOD1P15172 320 aa11.28□□□□□ -0.6
MKS1-201ENST00000313863 TNFSF4P23510 183 aa11.28□□□□□ -0.6
MKS1-201ENST00000313863 PCP4P48539 62 aa11.28□□□□□ -0.6
MKS1-201ENST00000313863 GNG10P50151 68 aa11.28□□□□□ -0.6
MKS1-201ENST00000313863 SUB1P53999 127 aaKnown RBP eCLIP11.28□□□□□ -0.6
MKS1-201ENST00000313863 SLC35B1P78383 322 aa11.28□□□□□ -0.6
MKS1-201ENST00000313863 TIMM23BQ5SRD1 257 aa11.28□□□□□ -0.6
MKS1-201ENST00000313863 Q6ZN92 141 aa11.28□□□□□ -0.6
MKS1-201ENST00000313863 NIT1Q86X76 327 aa11.28□□□□□ -0.6
MKS1-201ENST00000313863 OR9G1Q8NH87 305 aa11.28□□□□□ -0.6
MKS1-201ENST00000313863 SAP30LQ9HAJ7 183 aa11.28□□□□□ -0.6
MKS1-201ENST00000313863 AMMECR1Q9Y4X0 333 aaPredicted RBP11.28□□□□□ -0.6
MKS1-201ENST00000313863 hADV38S2A0JD32 116 aa11.28□□□□□ -0.6
MKS1-201ENST00000313863 M0R1B8 84 aa11.28□□□□□ -0.6
MKS1-201ENST00000313863 HIST1H1EP10412 219 aaKnown RBP11.28□□□□□ -0.6
MKS1-201ENST00000313863 CHRNB4P30926 498 aa11.28□□□□□ -0.6
MKS1-201ENST00000313863 KLF5Q13887 457 aaPredicted RBP11.28□□□□□ -0.6
MKS1-201ENST00000313863 PLA2G2CQ5R387 149 aa11.28□□□□□ -0.6
MKS1-201ENST00000313863 IGFL2Q6UWQ7 119 aa11.28□□□□□ -0.6
MKS1-201ENST00000313863 ATP5L2Q7Z4Y8 100 aa11.28□□□□□ -0.6
MKS1-201ENST00000313863 OR4A5Q8NH83 315 aa11.28□□□□□ -0.6
MKS1-201ENST00000313863 FAM122AQ96E09 287 aa11.28□□□□□ -0.6
MKS1-201ENST00000313863 SMIM12Q96EX1 92 aa11.28□□□□□ -0.6
MKS1-201ENST00000313863 FAM167A-AS1Q96KT0 104 aa11.28□□□□□ -0.6
MKS1-201ENST00000313863 SLC25A2Q9BXI2 301 aa11.28□□□□□ -0.6
MKS1-201ENST00000313863 RAI1Q7Z5J4 1906 aaPredicted RBP11.27□□□□□ -0.6
MKS1-201ENST00000313863 PCNX2A6NKB5 2137 aa11.27□□□□□ -0.61
MKS1-201ENST00000313863 IGLV3-9A0A075B6K5 115 aa11.27□□□□□ -0.61
MKS1-201ENST00000313863 PEX7O00628 323 aa11.27□□□□□ -0.61
MKS1-201ENST00000313863 HYPMO75409 117 aa11.27□□□□□ -0.61
MKS1-201ENST00000313863 SAA1P0DJI8 122 aaPredicted RBP11.27□□□□□ -0.61
MKS1-201ENST00000313863 GATA2P23769 480 aaPredicted RBP11.27□□□□□ -0.61
MKS1-201ENST00000313863 CCL11P51671 97 aa11.27□□□□□ -0.61
MKS1-201ENST00000313863 TBR1Q16650 682 aa11.27□□□□□ -0.61
MKS1-201ENST00000313863 VSTM2AQ8TAG5 236 aa11.27□□□□□ -0.61
MKS1-201ENST00000313863 C18orf32Q8TCD1 76 aa11.27□□□□□ -0.61
MKS1-201ENST00000313863 MBD6Q96DN6 1003 aa11.27□□□□□ -0.61
MKS1-201ENST00000313863 GAFA1Q96PS6 74 aa11.27□□□□□ -0.61
MKS1-201ENST00000313863 PAXXQ9BUH6 204 aa11.27□□□□□ -0.61
MKS1-201ENST00000313863 GAL3ST2Q9H3Q3 398 aa11.27□□□□□ -0.61
MKS1-201ENST00000313863 ZNF430Q9H8G1 570 aaPredicted RBP11.27□□□□□ -0.61
MKS1-201ENST00000313863 RNF114Q9Y508 228 aa11.27□□□□□ -0.61
MKS1-201ENST00000313863 TNCP24821 2201 aa11.27□□□□□ -0.61
MKS1-201ENST00000313863 PSMB11A5LHX3 300 aa11.26□□□□□ -0.61
MKS1-201ENST00000313863 HSBP1O75506 76 aa11.26□□□□□ -0.61
MKS1-201ENST00000313863 NTF3P20783 257 aa11.26□□□□□ -0.61
MKS1-201ENST00000313863 MSMPQ1L6U9 139 aa11.26□□□□□ -0.61
MKS1-201ENST00000313863 C10orf113Q5VZT2 155 aa11.26□□□□□ -0.61
MKS1-201ENST00000313863 ZNF833PQ6ZTB9 187 aa11.26□□□□□ -0.61
MKS1-201ENST00000313863 MOB3BQ86TA1 216 aa11.26□□□□□ -0.61
MKS1-201ENST00000313863 STXBP6Q8NFX7 210 aa11.26□□□□□ -0.61
MKS1-201ENST00000313863 NDUFA4L2Q9NRX3 87 aa11.26□□□□□ -0.61
MKS1-201ENST00000313863 LAMTOR2Q9Y2Q5 125 aa11.26□□□□□ -0.61
MKS1-201ENST00000313863 MRPS16Q9Y3D3 137 aaKnown RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms