RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 TEX13DA0A0J9YY54 714 aaPredicted RBP10.93□□□□□ -0.66
PPP1CA-201ENST00000312989 FABP12A6NFH5 140 aa10.93□□□□□ -0.66
PPP1CA-201ENST00000312989 DISC1C4P0D8 188 aa10.93□□□□□ -0.66
PPP1CA-201ENST00000312989 B3GALNT1O75752 331 aa10.93□□□□□ -0.66
PPP1CA-201ENST00000312989 MT-CO2P00403 227 aa10.93□□□□□ -0.66
PPP1CA-201ENST00000312989 RNASE2P10153 161 aaKnown RBP10.93□□□□□ -0.66
PPP1CA-201ENST00000312989 AKR1C2P52895 323 aa10.93□□□□□ -0.66
PPP1CA-201ENST00000312989 CD81P60033 236 aa10.93□□□□□ -0.66
PPP1CA-201ENST00000312989 SUPT4H1P63272 117 aaKnown RBP10.93□□□□□ -0.66
PPP1CA-201ENST00000312989 SPSB3Q6PJ21 355 aa10.93□□□□□ -0.66
PPP1CA-201ENST00000312989 SELENOHQ8IZQ5 122 aaKnown RBP10.93□□□□□ -0.66
PPP1CA-201ENST00000312989 PRRT1Q99946 306 aa10.93□□□□□ -0.66
PPP1CA-201ENST00000312989 PLEKHA3Q9HB20 300 aa10.93□□□□□ -0.66
PPP1CA-201ENST00000312989 MRPL36Q9P0J6 103 aaKnown RBP10.93□□□□□ -0.66
PPP1CA-201ENST00000312989 TMEM56-RWDD3S4R434 201 aa10.93□□□□□ -0.66
PPP1CA-201ENST00000312989 RBMY1BA6NDE4 496 aaKnown RBP10.92□□□□□ -0.66
PPP1CA-201ENST00000312989 RBMY1EA6NEQ0 496 aaKnown RBP10.92□□□□□ -0.66
PPP1CA-201ENST00000312989 NDUFA4O00483 81 aa10.92□□□□□ -0.66
PPP1CA-201ENST00000312989 NOL3O60936 208 aaKnown RBP10.92□□□□□ -0.66
PPP1CA-201ENST00000312989 IGHV3-48P01763 117 aa10.92□□□□□ -0.66
PPP1CA-201ENST00000312989 RBMY1DP0C7P1 496 aaKnown RBP10.92□□□□□ -0.66
PPP1CA-201ENST00000312989 TRIM16LQ309B1 348 aa10.92□□□□□ -0.66
PPP1CA-201ENST00000312989 ZNF57Q68EA5 555 aaPredicted RBP10.92□□□□□ -0.66
PPP1CA-201ENST00000312989 GTSCR1Q86UQ5 136 aa10.92□□□□□ -0.66
PPP1CA-201ENST00000312989 DEFB125Q8N687 156 aa10.92□□□□□ -0.66
PPP1CA-201ENST00000312989 MARC2Q969Z3 335 aa10.92□□□□□ -0.66
PPP1CA-201ENST00000312989 GALNT14Q96FL9 552 aa10.92□□□□□ -0.66
PPP1CA-201ENST00000312989 EDA2RQ9HAV5 297 aa10.92□□□□□ -0.66
PPP1CA-201ENST00000312989 PRR13Q9NZ81 148 aa10.92□□□□□ -0.66
PPP1CA-201ENST00000312989 MRPL27Q9P0M9 148 aaKnown RBP10.92□□□□□ -0.66
PPP1CA-201ENST00000312989 IGHV3OR16-8A0A075B7F1 116 aa10.91□□□□□ -0.66
PPP1CA-201ENST00000312989 ZNF701M0R085 212 aaPredicted RBP10.91□□□□□ -0.66
PPP1CA-201ENST00000312989 CYB5BO43169 146 aa10.91□□□□□ -0.66
PPP1CA-201ENST00000312989 ETV6P41212 452 aa10.91□□□□□ -0.66
PPP1CA-201ENST00000312989 TMEM187Q14656 261 aa10.91□□□□□ -0.66
PPP1CA-201ENST00000312989 TMEM170AQ8WVE7 144 aa10.91□□□□□ -0.66
PPP1CA-201ENST00000312989 RBPMSQ93062 196 aaKnown RBP10.91□□□□□ -0.66
PPP1CA-201ENST00000312989 GPR146Q96CH1 333 aa10.91□□□□□ -0.66
PPP1CA-201ENST00000312989 MISP3Q96FF7 219 aa10.91□□□□□ -0.66
PPP1CA-201ENST00000312989 OR10C1Q96KK4 312 aa10.91□□□□□ -0.66
PPP1CA-201ENST00000312989 CITED4Q96RK1 184 aa10.91□□□□□ -0.66
PPP1CA-201ENST00000312989 LYSTQ99698 3801 aa10.91□□□□□ -0.66
PPP1CA-201ENST00000312989 FNDC4Q9H6D8 234 aaPredicted RBP10.91□□□□□ -0.66
PPP1CA-201ENST00000312989 DAZ1Q9NQZ3 744 aaKnown RBP10.91□□□□□ -0.66
PPP1CA-201ENST00000312989 C14orf166Q9Y224 244 aaKnown RBP10.91□□□□□ -0.66
PPP1CA-201ENST00000312989 UFC1Q9Y3C8 167 aa10.91□□□□□ -0.66
PPP1CA-201ENST00000312989 FAM219AQ8IW50 185 aa10.9□□□□□ -0.66
PPP1CA-201ENST00000312989 OR52E5Q8NH55 327 aa10.9□□□□□ -0.66
PPP1CA-201ENST00000312989 TXN2Q99757 166 aa10.9□□□□□ -0.66
PPP1CA-201ENST00000312989 PALMDQ9NP74 551 aa10.9□□□□□ -0.66
PPP1CA-201ENST00000312989 TRAV25A0A0B4J276 109 aa10.9□□□□□ -0.67
PPP1CA-201ENST00000312989 K7EMT4 169 aa10.9□□□□□ -0.67
PPP1CA-201ENST00000312989 SCAF4O95104 1147 aaKnown RBP10.9□□□□□ -0.67
PPP1CA-201ENST00000312989 ERHP84090 104 aaKnown RBP10.9□□□□□ -0.67
PPP1CA-201ENST00000312989 DHODHQ02127 395 aa10.9□□□□□ -0.67
PPP1CA-201ENST00000312989 GUCA2BQ16661 112 aa10.9□□□□□ -0.67
PPP1CA-201ENST00000312989 Q56UQ5 140 aa10.9□□□□□ -0.67
PPP1CA-201ENST00000312989 NMSQ5H8A3 153 aa10.9□□□□□ -0.67
PPP1CA-201ENST00000312989 TMEM268Q5VZI3 342 aa10.9□□□□□ -0.67
PPP1CA-201ENST00000312989 SLC35G3Q8N808 338 aa10.9□□□□□ -0.67
PPP1CA-201ENST00000312989 UBAC2Q8NBM4 344 aa10.9□□□□□ -0.67
PPP1CA-201ENST00000312989 IL22RA2Q969J5 263 aa10.9□□□□□ -0.67
PPP1CA-201ENST00000312989 HIPK2Q9H2X6 1198 aa10.9□□□□□ -0.67
PPP1CA-201ENST00000312989 ZFAND3Q9H8U3 227 aa10.9□□□□□ -0.67
PPP1CA-201ENST00000312989 CACNG5Q9UF02 275 aa10.9□□□□□ -0.67
PPP1CA-201ENST00000312989 C15orf62A8K5M9 175 aa10.89□□□□□ -0.67
PPP1CA-201ENST00000312989 OR11H12B2RN74 326 aa10.89□□□□□ -0.67
PPP1CA-201ENST00000312989 ZNF207O43670 478 aaKnown RBP10.89□□□□□ -0.67
PPP1CA-201ENST00000312989 ATG12O94817 140 aa10.89□□□□□ -0.67
PPP1CA-201ENST00000312989 MFAP4P55083 255 aa10.89□□□□□ -0.67
PPP1CA-201ENST00000312989 MLANAQ16655 118 aa10.89□□□□□ -0.67
PPP1CA-201ENST00000312989 RRNAD1Q96FB5 475 aaKnown RBP10.89□□□□□ -0.67
PPP1CA-201ENST00000312989 SRRQ9GZT4 340 aa10.89□□□□□ -0.67
PPP1CA-201ENST00000312989 SRD5A3Q9H8P0 318 aa10.89□□□□□ -0.67
PPP1CA-201ENST00000312989 RETNQ9HD89 108 aa10.89□□□□□ -0.67
PPP1CA-201ENST00000312989 DNAH1Q9P2D7 4330 aa10.89□□□□□ -0.67
PPP1CA-201ENST00000312989 PLECQ15149 4684 aaKnown RBP10.88□□□□□ -0.67
PPP1CA-201ENST00000312989 TSPAN4O14817 238 aa10.88□□□□□ -0.67
PPP1CA-201ENST00000312989 IFNA17P01571 189 aa10.88□□□□□ -0.67
PPP1CA-201ENST00000312989 SPCS3P61009 180 aa10.88□□□□□ -0.67
PPP1CA-201ENST00000312989 ODF3L2Q3SX64 289 aa10.88□□□□□ -0.67
PPP1CA-201ENST00000312989 PINX1Q96BK5 328 aaKnown RBP10.88□□□□□ -0.67
PPP1CA-201ENST00000312989 SDHCQ99643 169 aaPredicted RBP10.88□□□□□ -0.67
PPP1CA-201ENST00000312989 ZMAT4Q9H898 229 aa10.88□□□□□ -0.67
PPP1CA-201ENST00000312989 MCUBQ9NWR8 336 aa10.88□□□□□ -0.67
PPP1CA-201ENST00000312989 SMPXQ9UHP9 88 aa10.88□□□□□ -0.67
PPP1CA-201ENST00000312989 SCP2D1Q9UJQ7 156 aa10.88□□□□□ -0.67
PPP1CA-201ENST00000312989 A0A1B0GU03 582 aa10.87□□□□□ -0.67
PPP1CA-201ENST00000312989 HOXA1P49639 335 aaPredicted RBP10.87□□□□□ -0.67
PPP1CA-201ENST00000312989 FAM90A2PQ658T7 463 aa10.87□□□□□ -0.67
PPP1CA-201ENST00000312989 SPAG8Q99932 426 aaPredicted RBP10.87□□□□□ -0.67
PPP1CA-201ENST00000312989 SPATA25Q9BR10 227 aa10.87□□□□□ -0.67
PPP1CA-201ENST00000312989 C20orf24Q9BUV8 137 aa10.87□□□□□ -0.67
PPP1CA-201ENST00000312989 TUBA4BQ9H853 241 aa10.87□□□□□ -0.67
PPP1CA-201ENST00000312989 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.87□□□□□ -0.67
PPP1CA-201ENST00000312989 GAR1Q9NY12 217 aaKnown RBP10.87□□□□□ -0.67
PPP1CA-201ENST00000312989 A0A0B4J2A0 478 aa10.86□□□□□ -0.67
PPP1CA-201ENST00000312989 IGHV7-4-1A0A0J9YVY3 117 aa10.86□□□□□ -0.67
PPP1CA-201ENST00000312989 CCDC160A6NGH7 325 aa10.86□□□□□ -0.67
PPP1CA-201ENST00000312989 CHEK1O14757 476 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms