RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 FAM122CQ6P4D5 195 aa13.32□□□□□ -0.28
CLCF1-201ENST00000312438 OR2T6Q8NHC8 308 aa13.32□□□□□ -0.28
CLCF1-201ENST00000312438 SSMEM1Q8WWF3 244 aa13.32□□□□□ -0.28
CLCF1-201ENST00000312438 RAB24Q969Q5 203 aa13.32□□□□□ -0.28
CLCF1-201ENST00000312438 RARRES2Q99969 163 aa13.32□□□□□ -0.28
CLCF1-201ENST00000312438 CARHSP1Q9Y2V2 147 aaKnown RBP13.32□□□□□ -0.28
CLCF1-201ENST00000312438 F11RQ9Y624 299 aaKnown RBP13.32□□□□□ -0.28
CLCF1-201ENST00000312438 TRAV20A0A0B4J274 112 aa13.31□□□□□ -0.28
CLCF1-201ENST00000312438 SEC14L6B5MCN3 397 aa13.31□□□□□ -0.28
CLCF1-201ENST00000312438 YIF1AO95070 293 aa13.31□□□□□ -0.28
CLCF1-201ENST00000312438 DEFA5Q01523 94 aa13.31□□□□□ -0.28
CLCF1-201ENST00000312438 FNDC4Q9H6D8 234 aaPredicted RBP13.31□□□□□ -0.28
CLCF1-201ENST00000312438 HIF1ANQ9NWT6 349 aa13.31□□□□□ -0.28
CLCF1-201ENST00000312438 SLC45A2Q9UMX9 530 aa13.31□□□□□ -0.28
CLCF1-201ENST00000312438 A0A1W2PPV4 95 aa13.3□□□□□ -0.28
CLCF1-201ENST00000312438 TSPAN9O75954 239 aa13.3□□□□□ -0.28
CLCF1-201ENST00000312438 APELAP0DMC3 54 aa13.3□□□□□ -0.28
CLCF1-201ENST00000312438 CDC34P49427 236 aaPredicted RBP13.3□□□□□ -0.28
CLCF1-201ENST00000312438 PPT1P50897 306 aa13.3□□□□□ -0.28
CLCF1-201ENST00000312438 FGF8P55075 233 aaPredicted RBP13.3□□□□□ -0.28
CLCF1-201ENST00000312438 PRR20EP86478 221 aa13.3□□□□□ -0.28
CLCF1-201ENST00000312438 PRR20CP86479 221 aa13.3□□□□□ -0.28
CLCF1-201ENST00000312438 PRR20DP86480 221 aa13.3□□□□□ -0.28
CLCF1-201ENST00000312438 PRR20BP86481 221 aa13.3□□□□□ -0.28
CLCF1-201ENST00000312438 PRR20AP86496 221 aa13.3□□□□□ -0.28
CLCF1-201ENST00000312438 HAGHQ16775 308 aa13.3□□□□□ -0.28
CLCF1-201ENST00000312438 ZNF506Q5JVG8 444 aa13.3□□□□□ -0.28
CLCF1-201ENST00000312438 FAM120AOSQ5T036 256 aa13.3□□□□□ -0.28
CLCF1-201ENST00000312438 STPG3Q8N7X2 389 aa13.3□□□□□ -0.28
CLCF1-201ENST00000312438 SLC35B3Q9H1N7 401 aa13.3□□□□□ -0.28
CLCF1-201ENST00000312438 SLC25A22Q9H936 323 aa13.3□□□□□ -0.28
CLCF1-201ENST00000312438 LRRK2Q5S007 2527 aa13.3□□□□□ -0.28
CLCF1-201ENST00000312438 MED13LQ71F56 2210 aa13.3□□□□□ -0.28
CLCF1-201ENST00000312438 IGKV1OR2-108A0A075B7D4 117 aa13.29□□□□□ -0.28
CLCF1-201ENST00000312438 A0A096LNT2 108 aa13.29□□□□□ -0.28
CLCF1-201ENST00000312438 CX3CL1P78423 397 aa13.29□□□□□ -0.28
CLCF1-201ENST00000312438 KHDC3LQ587J8 217 aa13.29□□□□□ -0.28
CLCF1-201ENST00000312438 SVBPQ8N300 66 aa13.29□□□□□ -0.28
CLCF1-201ENST00000312438 LINC01356Q8N9X3 169 aa13.29□□□□□ -0.28
CLCF1-201ENST00000312438 ABHD5Q8WTS1 349 aa13.29□□□□□ -0.28
CLCF1-201ENST00000312438 MISP3Q96FF7 219 aa13.29□□□□□ -0.28
CLCF1-201ENST00000312438 ACY3Q96HD9 319 aa13.29□□□□□ -0.28
CLCF1-201ENST00000312438 GNG13Q9P2W3 67 aa13.29□□□□□ -0.28
CLCF1-201ENST00000312438 CRYGCP07315 174 aa13.29□□□□□ -0.28
CLCF1-201ENST00000312438 LINC00869P0C866 280 aa13.29□□□□□ -0.28
CLCF1-201ENST00000312438 OR10J1P30954 320 aa13.29□□□□□ -0.28
CLCF1-201ENST00000312438 MFAP2P55001 183 aa13.29□□□□□ -0.28
CLCF1-201ENST00000312438 GCSAMLQ5JQS6 135 aa13.29□□□□□ -0.28
CLCF1-201ENST00000312438 RBMS3Q6XE24 437 aaKnown RBP13.29□□□□□ -0.28
CLCF1-201ENST00000312438 OR1L6Q8NGR2 347 aa13.29□□□□□ -0.28
CLCF1-201ENST00000312438 NPIPB3Q92617 1050 aa13.29□□□□□ -0.28
CLCF1-201ENST00000312438 PSMG3-AS1Q96PY0 264 aa13.29□□□□□ -0.28
CLCF1-201ENST00000312438 MEGF9Q9H1U4 602 aa13.29□□□□□ -0.28
CLCF1-201ENST00000312438 SPG11Q96JI7 2443 aa13.29□□□□□ -0.28
CLCF1-201ENST00000312438 IGHV3OR16-10A0A075B7F0 116 aa13.28□□□□□ -0.28
CLCF1-201ENST00000312438 TRAV40A0A0B4J280 105 aa13.28□□□□□ -0.28
CLCF1-201ENST00000312438 IFNA1P01562 189 aa13.28□□□□□ -0.28
CLCF1-201ENST00000312438 HSPB1P04792 205 aaKnown RBP13.28□□□□□ -0.28
CLCF1-201ENST00000312438 CTRB1P17538 263 aa13.28□□□□□ -0.28
CLCF1-201ENST00000312438 LOXL1Q08397 574 aaPredicted RBP13.28□□□□□ -0.28
CLCF1-201ENST00000312438 TMEM249Q2WGJ8 235 aa13.28□□□□□ -0.28
CLCF1-201ENST00000312438 RUSC1-AS1Q66K80 236 aa13.28□□□□□ -0.28
CLCF1-201ENST00000312438 CTRB2Q6GPI1 263 aa13.28□□□□□ -0.28
CLCF1-201ENST00000312438 Q8N9W7 124 aa13.28□□□□□ -0.28
CLCF1-201ENST00000312438 WNT10AQ9GZT5 417 aa13.28□□□□□ -0.28
CLCF1-201ENST00000312438 HMGB3O15347 200 aaKnown RBP13.27□□□□□ -0.28
CLCF1-201ENST00000312438 EIF3GO75821 320 aaKnown RBP eCLIP13.27□□□□□ -0.28
CLCF1-201ENST00000312438 SCO1O75880 301 aa13.27□□□□□ -0.28
CLCF1-201ENST00000312438 DEFA4P12838 97 aa13.27□□□□□ -0.28
CLCF1-201ENST00000312438 ICAM4Q14773 271 aa13.27□□□□□ -0.28
CLCF1-201ENST00000312438 RASL11BQ9BPW5 248 aa13.27□□□□□ -0.28
CLCF1-201ENST00000312438 SLC25A33Q9BSK2 321 aa13.27□□□□□ -0.28
CLCF1-201ENST00000312438 KMT2BQ9UMN6 2715 aaPredicted RBP13.27□□□□□ -0.28
CLCF1-201ENST00000312438 LOC102723971A0A1B0GUV8 181 aa13.27□□□□□ -0.29
CLCF1-201ENST00000312438 ZFP92A6NM28 416 aa13.27□□□□□ -0.29
CLCF1-201ENST00000312438 BCL2P10415 239 aa13.27□□□□□ -0.29
CLCF1-201ENST00000312438 BRD3OSQ6XYD6 125 aa13.27□□□□□ -0.29
CLCF1-201ENST00000312438 SLC35E3Q7Z769 313 aa13.27□□□□□ -0.29
CLCF1-201ENST00000312438 RXFP4Q8TDU9 374 aa13.27□□□□□ -0.29
CLCF1-201ENST00000312438 ARPC1AQ92747 370 aa13.27□□□□□ -0.29
CLCF1-201ENST00000312438 C19orf24Q9BVV8 132 aa13.27□□□□□ -0.29
CLCF1-201ENST00000312438 TAGLN2P37802 199 aaKnown RBP13.26□□□□□ -0.29
CLCF1-201ENST00000312438 RHOBP62745 196 aa13.26□□□□□ -0.29
CLCF1-201ENST00000312438 GUCA2BQ16661 112 aa13.26□□□□□ -0.29
CLCF1-201ENST00000312438 CYP2G1PQ6ZSU1 146 aa13.26□□□□□ -0.29
CLCF1-201ENST00000312438 THAP8Q8NA92 274 aa13.26□□□□□ -0.29
CLCF1-201ENST00000312438 TMEM116Q8NCL8 245 aa13.26□□□□□ -0.29
CLCF1-201ENST00000312438 C22orf15Q8WYQ4 148 aa13.26□□□□□ -0.29
CLCF1-201ENST00000312438 MBD6Q96DN6 1003 aa13.26□□□□□ -0.29
CLCF1-201ENST00000312438 FAM103A1Q9BTL3 118 aaKnown RBP13.26□□□□□ -0.29
CLCF1-201ENST00000312438 VAX2Q9UIW0 290 aa13.26□□□□□ -0.29
CLCF1-201ENST00000312438 MT-CO2P00403 227 aa13.25□□□□□ -0.29
CLCF1-201ENST00000312438 IGHV3-48P01763 117 aa13.25□□□□□ -0.29
CLCF1-201ENST00000312438 HLA-DRB1P01911 266 aa13.25□□□□□ -0.29
CLCF1-201ENST00000312438 SRP19P09132 144 aaKnown RBP13.25□□□□□ -0.29
CLCF1-201ENST00000312438 IGHV4-38-2P0DP08 117 aa13.25□□□□□ -0.29
CLCF1-201ENST00000312438 RND2P52198 227 aa13.25□□□□□ -0.29
CLCF1-201ENST00000312438 C19orf35Q6ZS72 473 aa13.25□□□□□ -0.29
CLCF1-201ENST00000312438 DMRT1Q9Y5R6 373 aa13.25□□□□□ -0.29
CLCF1-201ENST00000312438 IGHV7-81A0A0B4J1V7 117 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms