RNA–Protein interactions for RNA: ENST00000308961.4

NDUFA11-201, Transcript of NADH:ubiquinone oxidoreductase subunit A11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDUFA11, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA11-201ENST00000308961 C2CD3Q4AC94 2353 aa13.3□□□□□ -0.28
NDUFA11-201ENST00000308961 JMJD1CQ15652 2540 aa13.3□□□□□ -0.28
NDUFA11-201ENST00000308961 IGHV3-21A0A0B4J1V1 117 aa13.3□□□□□ -0.28
NDUFA11-201ENST00000308961 BRI3O95415 125 aa13.3□□□□□ -0.28
NDUFA11-201ENST00000308961 LY86O95711 162 aa13.3□□□□□ -0.28
NDUFA11-201ENST00000308961 TRGV3P03979 118 aa13.3□□□□□ -0.28
NDUFA11-201ENST00000308961 RPLP1P05386 114 aaKnown RBP13.3□□□□□ -0.28
NDUFA11-201ENST00000308961 RAB9AP51151 201 aa13.3□□□□□ -0.28
NDUFA11-201ENST00000308961 CAV2P51636 162 aa13.3□□□□□ -0.28
NDUFA11-201ENST00000308961 SUB1P53999 127 aaKnown RBP eCLIP13.3□□□□□ -0.28
NDUFA11-201ENST00000308961 RHOGP84095 191 aa13.3□□□□□ -0.28
NDUFA11-201ENST00000308961 FOXE3Q13461 319 aa13.3□□□□□ -0.28
NDUFA11-201ENST00000308961 TEX38Q6PEX7 206 aa13.3□□□□□ -0.28
NDUFA11-201ENST00000308961 ETV3LQ6ZN32 361 aa13.3□□□□□ -0.28
NDUFA11-201ENST00000308961 DCUN1D4Q92564 292 aa13.3□□□□□ -0.28
NDUFA11-201ENST00000308961 MISP3Q96FF7 219 aa13.3□□□□□ -0.28
NDUFA11-201ENST00000308961 C19orf24Q9BVV8 132 aa13.3□□□□□ -0.28
NDUFA11-201ENST00000308961 FNDC4Q9H6D8 234 aaPredicted RBP13.3□□□□□ -0.28
NDUFA11-201ENST00000308961 FBXL7Q9UJT9 491 aa13.3□□□□□ -0.28
NDUFA11-201ENST00000308961 S4R3C0 116 aa13.3□□□□□ -0.28
NDUFA11-201ENST00000308961 NIPBLQ6KC79 2804 aaeCLIP13.3□□□□□ -0.28
NDUFA11-201ENST00000308961 FXYD6-FXYD2A0A087WZ82 144 aa13.29□□□□□ -0.28
NDUFA11-201ENST00000308961 PRSS46E5RG02 174 aa13.29□□□□□ -0.28
NDUFA11-201ENST00000308961 H3BUA1 57 aa13.29□□□□□ -0.28
NDUFA11-201ENST00000308961 I3L2K1 104 aa13.29□□□□□ -0.28
NDUFA11-201ENST00000308961 K7EIM0 57 aa13.29□□□□□ -0.28
NDUFA11-201ENST00000308961 CST7O76096 145 aa13.29□□□□□ -0.28
NDUFA11-201ENST00000308961 IGHV3-48P01763 117 aa13.29□□□□□ -0.28
NDUFA11-201ENST00000308961 IFNA4P05014 189 aa13.29□□□□□ -0.28
NDUFA11-201ENST00000308961 PET100P0DJ07 73 aa13.29□□□□□ -0.28
NDUFA11-201ENST00000308961 CD28P10747 220 aa13.29□□□□□ -0.28
NDUFA11-201ENST00000308961 RPP30P78346 268 aaKnown RBP13.29□□□□□ -0.28
NDUFA11-201ENST00000308961 NHLH2Q02577 135 aa13.29□□□□□ -0.28
NDUFA11-201ENST00000308961 FOXL1Q12952 345 aa13.29□□□□□ -0.28
NDUFA11-201ENST00000308961 RNF152Q8N8N0 203 aa13.29□□□□□ -0.28
NDUFA11-201ENST00000308961 C11orf44Q8N8P7 122 aa13.29□□□□□ -0.28
NDUFA11-201ENST00000308961 MRPL36Q9P0J6 103 aaKnown RBP13.29□□□□□ -0.28
NDUFA11-201ENST00000308961 MT-CO2P00403 227 aa13.28□□□□□ -0.28
NDUFA11-201ENST00000308961 ELANEP08246 267 aa13.28□□□□□ -0.28
NDUFA11-201ENST00000308961 OR8U8P0C7N1 319 aa13.28□□□□□ -0.28
NDUFA11-201ENST00000308961 HIST1H1BP16401 226 aaKnown RBP13.28□□□□□ -0.28
NDUFA11-201ENST00000308961 ATP5IP56385 69 aaPredicted RBP13.28□□□□□ -0.28
NDUFA11-201ENST00000308961 TPPP2P59282 170 aa13.28□□□□□ -0.28
NDUFA11-201ENST00000308961 EWSR1Q01844 656 aaKnown RBP eCLIP13.28□□□□□ -0.286e-6■□□□□ 9.2
NDUFA11-201ENST00000308961 AWAT1Q58HT5 328 aa13.28□□□□□ -0.28
NDUFA11-201ENST00000308961 OR8G2PQ6IF36 304 aa13.28□□□□□ -0.28
NDUFA11-201ENST00000308961 OR1L6Q8NGR2 347 aa13.28□□□□□ -0.28
NDUFA11-201ENST00000308961 MYOZ3Q8TDC0 251 aa13.28□□□□□ -0.28
NDUFA11-201ENST00000308961 PINX1Q96BK5 328 aaKnown RBP13.28□□□□□ -0.28
NDUFA11-201ENST00000308961 TNFSF18Q9UNG2 199 aa13.28□□□□□ -0.28
NDUFA11-201ENST00000308961 A0A1B0GUS0 222 aa13.27□□□□□ -0.29
NDUFA11-201ENST00000308961 MFSD2BA6NFX1 497 aa13.27□□□□□ -0.29
NDUFA11-201ENST00000308961 IGHV3-23P01764 117 aa13.27□□□□□ -0.29
NDUFA11-201ENST00000308961 RPL12P30050 165 aaKnown RBP13.27□□□□□ -0.29
NDUFA11-201ENST00000308961 RAB11AP62491 216 aa13.27□□□□□ -0.29
NDUFA11-201ENST00000308961 TMEM65Q6PI78 240 aa13.27□□□□□ -0.29
NDUFA11-201ENST00000308961 ZNF546Q86UE3 836 aa13.27□□□□□ -0.29
NDUFA11-201ENST00000308961 NOXA1Q86UR1 476 aa13.27□□□□□ -0.29
NDUFA11-201ENST00000308961 NECAP1Q8NC96 275 aa13.27□□□□□ -0.29
NDUFA11-201ENST00000308961 RNASEH2CQ8TDP1 164 aaKnown RBP13.27□□□□□ -0.29
NDUFA11-201ENST00000308961 SCARB1Q8WTV0 552 aa13.27□□□□□ -0.29
NDUFA11-201ENST00000308961 NF1P21359 2839 aa13.26□□□□□ -0.29
NDUFA11-201ENST00000308961 RNF222A6NCQ9 220 aa13.26□□□□□ -0.29
NDUFA11-201ENST00000308961 PFDN1O60925 122 aa13.26□□□□□ -0.29
NDUFA11-201ENST00000308961 C1QBP02746 253 aa13.26□□□□□ -0.29
NDUFA11-201ENST00000308961 SULT1A1P50225 295 aa13.26□□□□□ -0.29
NDUFA11-201ENST00000308961 CD69Q07108 199 aa13.26□□□□□ -0.29
NDUFA11-201ENST00000308961 C15orf32Q32M92 178 aa13.26□□□□□ -0.29
NDUFA11-201ENST00000308961 C18orf65Q6ZTR6 163 aa13.26□□□□□ -0.29
NDUFA11-201ENST00000308961 COMMD1Q8N668 190 aa13.26□□□□□ -0.29
NDUFA11-201ENST00000308961 TMEM217Q8N7C4 229 aa13.26□□□□□ -0.29
NDUFA11-201ENST00000308961 ZNF491Q8N8L2 437 aa13.26□□□□□ -0.29
NDUFA11-201ENST00000308961 SLC25A31Q9H0C2 315 aa13.26□□□□□ -0.29
NDUFA11-201ENST00000308961 SLA2Q9H6Q3 261 aa13.26□□□□□ -0.29
NDUFA11-201ENST00000308961 IGHV3-11P01762 117 aa13.25□□□□□ -0.29
NDUFA11-201ENST00000308961 ATP5G2Q06055 141 aa13.25□□□□□ -0.29
NDUFA11-201ENST00000308961 OR4X2Q8NGF9 303 aa13.25□□□□□ -0.29
NDUFA11-201ENST00000308961 WFDC12Q8WWY7 111 aa13.25□□□□□ -0.29
NDUFA11-201ENST00000308961 AQP10Q96PS8 301 aa13.25□□□□□ -0.29
NDUFA11-201ENST00000308961 CITED2Q99967 270 aaPredicted RBP13.25□□□□□ -0.29
NDUFA11-201ENST00000308961 GNB4Q9HAV0 340 aa13.25□□□□□ -0.29
NDUFA11-201ENST00000308961 HSPB11Q9Y547 144 aa13.25□□□□□ -0.29
NDUFA11-201ENST00000308961 SETD2Q9BYW2 2564 aaPredicted RBP13.24□□□□□ -0.29
NDUFA11-201ENST00000308961 FAM223BA6NKX1 122 aa13.24□□□□□ -0.29
NDUFA11-201ENST00000308961 F8W735 103 aaPredicted RBP13.24□□□□□ -0.29
NDUFA11-201ENST00000308961 CORTO00230 105 aa13.24□□□□□ -0.29
NDUFA11-201ENST00000308961 ARPC5O15511 151 aa13.24□□□□□ -0.29
NDUFA11-201ENST00000308961 CYB5BO43169 146 aa13.24□□□□□ -0.29
NDUFA11-201ENST00000308961 GPX4P36969 197 aaPredicted RBP13.24□□□□□ -0.29
NDUFA11-201ENST00000308961 OPRK1P41145 380 aa13.24□□□□□ -0.29
NDUFA11-201ENST00000308961 SLC16A13Q7RTY0 426 aa13.24□□□□□ -0.29
NDUFA11-201ENST00000308961 FAM223AQ8IWN6 122 aa13.24□□□□□ -0.29
NDUFA11-201ENST00000308961 OR10P1Q8NGE3 313 aa13.24□□□□□ -0.29
NDUFA11-201ENST00000308961 USMG5Q96IX5 58 aa13.24□□□□□ -0.29
NDUFA11-201ENST00000308961 OR5B12Q96R08 314 aa13.24□□□□□ -0.29
NDUFA11-201ENST00000308961 WFDC1Q9HC57 220 aa13.24□□□□□ -0.29
NDUFA11-201ENST00000308961 THYN1Q9P016 225 aa13.24□□□□□ -0.29
NDUFA11-201ENST00000308961 TCRBV4S1A1TA0A5B7 111 aa13.23□□□□□ -0.29
NDUFA11-201ENST00000308961 HMSDA8MTL9 139 aa13.23□□□□□ -0.29
NDUFA11-201ENST00000308961 CXCL2P19875 107 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms