RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 CX3CL1P78423 397 aa5.51□□□□□ -1.53
PTCD2-201ENST00000308077 DLK1P80370 383 aa5.51□□□□□ -1.53
PTCD2-201ENST00000308077 KRTAP1-1Q07627 177 aa5.51□□□□□ -1.53
PTCD2-201ENST00000308077 FXYD3Q14802 87 aa5.51□□□□□ -1.53
PTCD2-201ENST00000308077 TMEM182Q6ZP80 229 aaPredicted RBP5.51□□□□□ -1.53
PTCD2-201ENST00000308077 ZNF114Q8NC26 417 aa5.51□□□□□ -1.53
PTCD2-201ENST00000308077 C22orf15Q8WYQ4 148 aa5.51□□□□□ -1.53
PTCD2-201ENST00000308077 TAF15Q92804 592 aaKnown RBP eCLIP5.51□□□□□ -1.53
PTCD2-201ENST00000308077 HSPB9Q9BQS6 159 aa5.51□□□□□ -1.53
PTCD2-201ENST00000308077 FAM96BQ9Y3D0 163 aa5.51□□□□□ -1.53
PTCD2-201ENST00000308077 FBXO7Q9Y3I1 522 aa5.51□□□□□ -1.53
PTCD2-201ENST00000308077 DMRT1Q9Y5R6 373 aa5.51□□□□□ -1.53
PTCD2-201ENST00000308077 ABCA1O95477 2261 aa5.51□□□□□ -1.53
PTCD2-201ENST00000308077 ZANQ9Y493 2812 aa5.51□□□□□ -1.53
PTCD2-201ENST00000308077 SH2D7A6NKC9 451 aaPredicted RBP5.5□□□□□ -1.53
PTCD2-201ENST00000308077 H3BUX3 64 aa5.5□□□□□ -1.53
PTCD2-201ENST00000308077 SCAF4O95104 1147 aaKnown RBP5.5□□□□□ -1.53
PTCD2-201ENST00000308077 ATP5IP56385 69 aaPredicted RBP5.5□□□□□ -1.53
PTCD2-201ENST00000308077 MLANAQ16655 118 aa5.5□□□□□ -1.53
PTCD2-201ENST00000308077 DEFB112Q30KQ8 113 aa5.5□□□□□ -1.53
PTCD2-201ENST00000308077 TOR2AQ5JU69 321 aa5.5□□□□□ -1.53
PTCD2-201ENST00000308077 ASPHD1Q5U4P2 390 aa5.5□□□□□ -1.53
PTCD2-201ENST00000308077 PVRIGQ6DKI7 326 aa5.5□□□□□ -1.53
PTCD2-201ENST00000308077 SLC25A24Q6NUK1 477 aa5.5□□□□□ -1.53
PTCD2-201ENST00000308077 TREML4Q6UXN2 200 aa5.5□□□□□ -1.53
PTCD2-201ENST00000308077 ZNF562Q6V9R5 426 aa5.5□□□□□ -1.53
PTCD2-201ENST00000308077 C5orf56Q8N8D9 126 aa5.5□□□□□ -1.53
PTCD2-201ENST00000308077 OR2G3Q8NGZ4 309 aa5.5□□□□□ -1.53
PTCD2-201ENST00000308077 RNF141Q8WVD5 230 aa5.5□□□□□ -1.53
PTCD2-201ENST00000308077 RBM14Q96PK6 669 aaKnown RBP5.5□□□□□ -1.53
PTCD2-201ENST00000308077 SLC25A33Q9BSK2 321 aa5.5□□□□□ -1.53
PTCD2-201ENST00000308077 GGACTQ9BVM4 153 aa5.5□□□□□ -1.53
PTCD2-201ENST00000308077 FNDC4Q9H6D8 234 aaPredicted RBP5.5□□□□□ -1.53
PTCD2-201ENST00000308077 C1RLQ9NZP8 487 aa5.5□□□□□ -1.53
PTCD2-201ENST00000308077 WDR83OSQ9Y284 106 aa5.5□□□□□ -1.53
PTCD2-201ENST00000308077 SMCO3A2RU48 225 aa5.5□□□□□ -1.53
PTCD2-201ENST00000308077 A6NDX4 124 aa5.5□□□□□ -1.53
PTCD2-201ENST00000308077 HLA-DRB1P01911 266 aa5.5□□□□□ -1.53
PTCD2-201ENST00000308077 AMY1AP04745 511 aa5.5□□□□□ -1.53
PTCD2-201ENST00000308077 EGR2P11161 476 aaPredicted RBP5.5□□□□□ -1.53
PTCD2-201ENST00000308077 FGF7P21781 194 aa5.5□□□□□ -1.53
PTCD2-201ENST00000308077 FHITP49789 147 aa5.5□□□□□ -1.53
PTCD2-201ENST00000308077 SRSF3P84103 164 aaKnown RBP5.5□□□□□ -1.53
PTCD2-201ENST00000308077 LY6EQ16553 131 aa5.5□□□□□ -1.53
PTCD2-201ENST00000308077 EIF5AL1Q6IS14 154 aaKnown RBP5.5□□□□□ -1.53
PTCD2-201ENST00000308077 BTNL8Q6UX41 500 aa5.5□□□□□ -1.53
PTCD2-201ENST00000308077 NANPQ8TBE9 248 aa5.5□□□□□ -1.53
PTCD2-201ENST00000308077 SCGB1C1Q8TD33 95 aa5.5□□□□□ -1.53
PTCD2-201ENST00000308077 ABHD5Q8WTS1 349 aa5.5□□□□□ -1.53
PTCD2-201ENST00000308077 ARPC1AQ92747 370 aa5.5□□□□□ -1.53
PTCD2-201ENST00000308077 GNPNAT1Q96EK6 184 aaPredicted RBP5.5□□□□□ -1.53
PTCD2-201ENST00000308077 VSIRQ9H7M9 311 aa5.5□□□□□ -1.53
PTCD2-201ENST00000308077 MOB4Q9Y3A3 225 aa5.5□□□□□ -1.53
PTCD2-201ENST00000308077 EPPK1P58107 5090 aaKnown RBP5.49□□□□□ -1.53
PTCD2-201ENST00000308077 ZNF705EA8MWA4 302 aaPredicted RBP5.49□□□□□ -1.53
PTCD2-201ENST00000308077 CTRB1P17538 263 aa5.49□□□□□ -1.53
PTCD2-201ENST00000308077 BPIFB3P59826 476 aa5.49□□□□□ -1.53
PTCD2-201ENST00000308077 CD69Q07108 199 aa5.49□□□□□ -1.53
PTCD2-201ENST00000308077 CTRB2Q6GPI1 263 aa5.49□□□□□ -1.53
PTCD2-201ENST00000308077 C9orf139Q6ZV77 190 aa5.49□□□□□ -1.53
PTCD2-201ENST00000308077 ZNF48Q96MX3 618 aaPredicted RBP5.49□□□□□ -1.53
PTCD2-201ENST00000308077 LINC00052Q96N35 136 aa5.49□□□□□ -1.53
PTCD2-201ENST00000308077 MGST2Q99735 147 aa5.49□□□□□ -1.53
PTCD2-201ENST00000308077 RASL11BQ9BPW5 248 aa5.49□□□□□ -1.53
PTCD2-201ENST00000308077 SRSF8Q9BRL6 282 aaKnown RBP5.49□□□□□ -1.53
PTCD2-201ENST00000308077 PSMG3Q9BT73 122 aaPredicted RBP5.49□□□□□ -1.53
PTCD2-201ENST00000308077 NPCDR1Q9BY65 106 aa5.49□□□□□ -1.53
PTCD2-201ENST00000308077 MED9Q9NWA0 146 aa5.49□□□□□ -1.53
PTCD2-201ENST00000308077 LSM4Q9Y4Z0 139 aaKnown RBP5.49□□□□□ -1.53
PTCD2-201ENST00000308077 F11RQ9Y624 299 aaKnown RBP5.49□□□□□ -1.53
PTCD2-201ENST00000308077 HYDINQ4G0P3 5121 aa5.49□□□□□ -1.53
PTCD2-201ENST00000308077 NSD1Q96L73 2696 aaPredicted RBP5.49□□□□□ -1.53
PTCD2-201ENST00000308077 IGKV1OR2-108A0A075B7D4 117 aa5.49□□□□□ -1.53
PTCD2-201ENST00000308077 LINC01548A6NM66 108 aa5.49□□□□□ -1.53
PTCD2-201ENST00000308077 FNDC10F2Z333 226 aa5.49□□□□□ -1.53
PTCD2-201ENST00000308077 I3L521 148 aa5.49□□□□□ -1.53
PTCD2-201ENST00000308077 SUB1P53999 127 aaKnown RBP eCLIP5.49□□□□□ -1.53
PTCD2-201ENST00000308077 GAMTQ14353 236 aa5.49□□□□□ -1.53
PTCD2-201ENST00000308077 C4orf48Q5BLP8 95 aa5.49□□□□□ -1.53
PTCD2-201ENST00000308077 PXDC1Q5TGL8 231 aa5.49□□□□□ -1.53
PTCD2-201ENST00000308077 ACSM6Q6P461 480 aa5.49□□□□□ -1.53
PTCD2-201ENST00000308077 Q6ZRG5 221 aa5.49□□□□□ -1.53
PTCD2-201ENST00000308077 IL17RELQ6ZVW7 336 aa5.49□□□□□ -1.53
PTCD2-201ENST00000308077 SLC16A13Q7RTY0 426 aa5.49□□□□□ -1.53
PTCD2-201ENST00000308077 HSD17B13Q7Z5P4 300 aaPredicted RBP5.49□□□□□ -1.53
PTCD2-201ENST00000308077 CENPVQ7Z7K6 275 aaPredicted RBP5.49□□□□□ -1.53
PTCD2-201ENST00000308077 MRPL41Q8IXM3 137 aaKnown RBP5.49□□□□□ -1.53
PTCD2-201ENST00000308077 OR1P1Q8NH06 330 aa5.49□□□□□ -1.53
PTCD2-201ENST00000308077 OR2T6Q8NHC8 308 aa5.49□□□□□ -1.53
PTCD2-201ENST00000308077 RNASEH2CQ8TDP1 164 aaKnown RBP5.49□□□□□ -1.53
PTCD2-201ENST00000308077 FAM210AQ96ND0 272 aa5.49□□□□□ -1.53
PTCD2-201ENST00000308077 WNT10AQ9GZT5 417 aa5.49□□□□□ -1.53
PTCD2-201ENST00000308077 NPVFQ9HCQ7 196 aa5.49□□□□□ -1.53
PTCD2-201ENST00000308077 MRPL36Q9P0J6 103 aaKnown RBP5.49□□□□□ -1.53
PTCD2-201ENST00000308077 TIMM9Q9Y5J7 89 aa5.49□□□□□ -1.53
PTCD2-201ENST00000308077 UBR4Q5T4S7 5183 aa5.49□□□□□ -1.53
PTCD2-201ENST00000308077 ATP6V0E1O15342 81 aa5.48□□□□□ -1.53
PTCD2-201ENST00000308077 IGHV3-48P01763 117 aa5.48□□□□□ -1.53
PTCD2-201ENST00000308077 IGHV4-59P01825 116 aa5.48□□□□□ -1.53
PTCD2-201ENST00000308077 PRH1P02810 166 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms